RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 CRHR2Q13324 411 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 MTMR2Q13614 643 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 PDE3AQ14432 1141 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 ARHGEF6Q15052 776 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 FAM47AQ5JRC9 791 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 SLC10A5Q5PT55 438 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 CCDC174Q6PII3 467 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 NFXL1Q6ZNB6 911 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 CCDC144CPQ8IYA2 1237 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 SH3RF3Q8TEJ3 882 aaPredicted RBP3□□□□□ -1.93
PRPF39-205ENST00000554081 LRRCC1Q9C099 1032 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 ARHGAP39Q9C0H5 1083 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 DDX24Q9GZR7 859 aaKnown RBP eCLIP3□□□□□ -1.93
PRPF39-205ENST00000554081 TSPYL2Q9H2G4 693 aaPredicted RBP3□□□□□ -1.93
PRPF39-205ENST00000554081 PKD2L1Q9P0L9 805 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 ZHX1Q9UKY1 873 aaPredicted RBP3□□□□□ -1.93
PRPF39-205ENST00000554081 ZDBF2Q9HCK1 2354 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 TRPM3Q9HCF6 1732 aaPredicted RBP3□□□□□ -1.93
PRPF39-205ENST00000554081 PDHXO00330 501 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 VIL1P09327 827 aaKnown RBP3□□□□□ -1.93
PRPF39-205ENST00000554081 CYP2D6P10635 497 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 ATP2B1P20020 1258 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 RPS12P25398 132 aaKnown RBP3□□□□□ -1.93
PRPF39-205ENST00000554081 SHROOM1Q2M3G4 852 aaPredicted RBP3□□□□□ -1.93
PRPF39-205ENST00000554081 CERKLQ49MI3 558 aaPredicted RBP3□□□□□ -1.93
PRPF39-205ENST00000554081 CDC42EP5Q6NZY7 148 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 FAM117BQ6P1L5 589 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 LRRC47Q8N1G4 583 aaKnown RBP3□□□□□ -1.93
PRPF39-205ENST00000554081 ZGPATQ8N5A5 531 aaKnown RBP3□□□□□ -1.93
PRPF39-205ENST00000554081 SPRYD3Q8NCJ5 442 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 RHPN1Q8TCX5 695 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 COA7Q96BR5 231 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 EAF2Q96CJ1 260 aaPredicted RBP3□□□□□ -1.93
PRPF39-205ENST00000554081 NUP88Q99567 741 aaPredicted RBP3□□□□□ -1.93
PRPF39-205ENST00000554081 CRNKL1Q9BZJ0 848 aaKnown RBP3□□□□□ -1.93
PRPF39-205ENST00000554081 HMG20BQ9P0W2 317 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 NOD1Q9Y239 953 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 DAGLAQ9Y4D2 1042 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 LRRC37A3O60309 1634 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 MYH14Q7Z406 1995 aaKnown RBP3□□□□□ -1.93
PRPF39-205ENST00000554081 NWD2Q9ULI1 1742 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 PRUNE2Q8WUY3 3088 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 URB1O60287 2271 aaKnown RBP2.99□□□□□ -1.93
PRPF39-205ENST00000554081 DDTLA6NHG4 134 aaPredicted RBP2.99□□□□□ -1.93
PRPF39-205ENST00000554081 ZNF853P0CG23 659 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 EN2P19622 333 aaPredicted RBP2.99□□□□□ -1.93
PRPF39-205ENST00000554081 GSTO1P78417 241 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 TRIM28Q13263 835 aaKnown RBP2.99□□□□□ -1.93
PRPF39-205ENST00000554081 SNAPC2Q13487 334 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 MTFR1Q15390 333 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 USH1GQ495M9 461 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 HSP90AB4PQ58FF6 505 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 TNNI3KQ59H18 835 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 SEC62Q99442 399 aaKnown RBP2.99□□□□□ -1.93
PRPF39-205ENST00000554081 LARP6Q9BRS8 491 aaKnown RBP2.99□□□□□ -1.93
PRPF39-205ENST00000554081 GPCPD1Q9NPB8 672 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 CLIP2Q9UDT6 1046 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 TCEAL9Q9UHQ7 104 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 FPGT-TNNI3KV9GXZ4 949 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 PRRC2BQ5JSZ5 2229 aaKnown RBP2.99□□□□□ -1.93
PRPF39-205ENST00000554081 PTPRCP08575 1304 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 ZNF532Q9HCE3 1301 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 VCANP13611 3396 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 KNDC1Q76NI1 1749 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 KIAA1210Q9ULL0 1709 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 C10orf71Q711Q0 1435 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP2.99□□□□□ -1.93
PRPF39-205ENST00000554081 PTPDC1A2A3K4 754 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 ZBBXA8MT70 800 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 MARCH6O60337 910 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 TSPY3P0CV98 308 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 TSPY8P0CW00 308 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 MCCP23508 829 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 MDM2Q00987 491 aaPredicted RBP2.99□□□□□ -1.93
PRPF39-205ENST00000554081 TRDNQ13061 729 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 SEPT2Q15019 361 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 ANKRD35Q8N283 1001 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 FAM43AQ8N2R8 423 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 OTUD7AQ8TE49 926 aaPredicted RBP2.99□□□□□ -1.93
PRPF39-205ENST00000554081 KIF1BPQ96EK5 621 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 TCEANC2Q96MN5 208 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 NACAP1Q9BZK3 213 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 ANO2Q9NQ90 1003 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 INCENPQ9NQS7 918 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 BABAM1Q9NWV8 329 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 WBP1LQ9NX94 342 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 RIPOR2Q9Y4F9 1068 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 RTL9Q8NET4 1388 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 MAST3O60307 1309 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 MYO3BQ8WXR4 1341 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 NCAPD2Q15021 1401 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 MYOM1P52179 1685 aa2.99□□□□□ -1.93
PRPF39-205ENST00000554081 CCER2I3L3R5 266 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 UQCRFS1P1P0C7P4 283 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 ALAS1P13196 640 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 HOXD10P28358 340 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 MCAMP43121 646 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 FLT3LGP49771 235 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 ABCB5Q2M3G0 1257 aa2.98□□□□□ -1.93
PRPF39-205ENST00000554081 GRIPAP1Q4V328 841 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms