RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-209ENST00000553889 POLR3DP05423 398 aaPredicted RBP10.67□□□□□ -0.7
PRKCH-209ENST00000553889 NDUFA8P51970 172 aa10.67□□□□□ -0.7
PRKCH-209ENST00000553889 NLRP12P59046 1061 aa10.67□□□□□ -0.7
PRKCH-209ENST00000553889 PPP4CP60510 307 aa10.67□□□□□ -0.7
PRKCH-209ENST00000553889 CEBPZQ03701 1054 aaKnown RBP10.67□□□□□ -0.7
PRKCH-209ENST00000553889 SAFBQ15424 915 aaKnown RBP eCLIP10.67□□□□□ -0.7
PRKCH-209ENST00000553889 CCDC178Q5BJE1 867 aa10.67□□□□□ -0.7
PRKCH-209ENST00000553889 CT47A1Q5JQC4 288 aaPredicted RBP10.67□□□□□ -0.7
PRKCH-209ENST00000553889 NBPF5PQ86XG9 351 aaPredicted RBP10.67□□□□□ -0.7
PRKCH-209ENST00000553889 PRIMPOLQ96LW4 560 aa10.67□□□□□ -0.7
PRKCH-209ENST00000553889 ZSCAN10Q96SZ4 725 aaPredicted RBP10.67□□□□□ -0.7
PRKCH-209ENST00000553889 SDF4Q9BRK5 362 aa10.67□□□□□ -0.7
PRKCH-209ENST00000553889 UBAC1Q9BSL1 405 aa10.67□□□□□ -0.7
PRKCH-209ENST00000553889 CRNKL1Q9BZJ0 848 aaKnown RBP10.67□□□□□ -0.7
PRKCH-209ENST00000553889 RAI14Q9P0K7 980 aa10.67□□□□□ -0.7
PRKCH-209ENST00000553889 ECM29Q5VYK3 1845 aa10.67□□□□□ -0.7
PRKCH-209ENST00000553889 SBF2Q86WG5 1849 aa10.67□□□□□ -0.7
PRKCH-209ENST00000553889 ROBO3Q96MS0 1386 aa10.66□□□□□ -0.7
PRKCH-209ENST00000553889 GOLGA6L19H0YKK7 550 aa10.66□□□□□ -0.7
PRKCH-209ENST00000553889 WDHD1O75717 1129 aaPredicted RBP10.66□□□□□ -0.7
PRKCH-209ENST00000553889 SLC3A2P08195 630 aaKnown RBP10.66□□□□□ -0.7
PRKCH-209ENST00000553889 PTPREP23469 700 aa10.66□□□□□ -0.7
PRKCH-209ENST00000553889 GTF2E1P29083 439 aaPredicted RBP10.66□□□□□ -0.7
PRKCH-209ENST00000553889 GTF2F1P35269 517 aaKnown RBP eCLIP10.66□□□□□ -0.7
PRKCH-209ENST00000553889 TROAPQ12815 778 aa10.66□□□□□ -0.7
PRKCH-209ENST00000553889 CTR9Q6PD62 1173 aa10.66□□□□□ -0.7
PRKCH-209ENST00000553889 C11orf57Q6ZUT1 292 aaPredicted RBP10.66□□□□□ -0.7
PRKCH-209ENST00000553889 DHX40Q8IX18 779 aaKnown RBP10.66□□□□□ -0.7
PRKCH-209ENST00000553889 WDR66Q8TBY9 1149 aa10.66□□□□□ -0.7
PRKCH-209ENST00000553889 ARHGEF1Q92888 912 aaKnown RBP10.66□□□□□ -0.7
PRKCH-209ENST00000553889 NAP1L5Q96NT1 182 aaPredicted RBP10.66□□□□□ -0.7
PRKCH-209ENST00000553889 TRIM5Q9C035 493 aa10.66□□□□□ -0.7
PRKCH-209ENST00000553889 KCNF1Q9H3M0 494 aa10.66□□□□□ -0.7
PRKCH-209ENST00000553889 ARPP21Q9UBL0 812 aaPredicted RBP10.66□□□□□ -0.7
PRKCH-209ENST00000553889 MKRN1Q9UHC7 482 aaKnown RBP10.66□□□□□ -0.7
PRKCH-209ENST00000553889 CCNL1Q9UK58 526 aaPredicted RBP10.66□□□□□ -0.7
PRKCH-209ENST00000553889 A0A1B0GVL5 298 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 KLRG2A4D1S0 409 aaPredicted RBP10.65□□□□□ -0.7
PRKCH-209ENST00000553889 SMTNL1A8MU46 457 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 PFKFB1P16118 471 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 XBP1P17861 261 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 KCNJ6P48051 423 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 MECOMQ03112 1051 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 GRAPQ13588 217 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 CRY2Q49AN0 593 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 NT5DC1Q5TFE4 455 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 SHC4Q6S5L8 630 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 IQCA1Q86XH1 822 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 ENAHQ8N8S7 591 aaPredicted RBP10.65□□□□□ -0.7
PRKCH-209ENST00000553889 MIGA1Q8NAN2 632 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 GRAPLQ8TC17 118 aaPredicted RBP10.65□□□□□ -0.7
PRKCH-209ENST00000553889 PHKBQ93100 1093 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 AIFM3Q96NN9 605 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 SLC26A6Q9BXS9 759 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 OSBPL5Q9H0X9 879 aaPredicted RBP10.65□□□□□ -0.7
PRKCH-209ENST00000553889 TTC12Q9H892 705 aaPredicted RBP10.65□□□□□ -0.7
PRKCH-209ENST00000553889 DCP1AQ9NPI6 582 aaPredicted RBP10.65□□□□□ -0.7
PRKCH-209ENST00000553889 TCP11L1Q9NUJ3 509 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 IMPACTQ9P2X3 320 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 ABCF2Q9UG63 623 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 USP21Q9UK80 565 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 CEP131Q9UPN4 1083 aa10.65□□□□□ -0.7
PRKCH-209ENST00000553889 SRPRBQ9Y5M8 271 aaKnown RBP10.65□□□□□ -0.7
PRKCH-209ENST00000553889 TNKSO95271 1327 aa10.64□□□□□ -0.71
PRKCH-209ENST00000553889 CCDC88AQ3V6T2 1871 aa10.64□□□□□ -0.71
PRKCH-209ENST00000553889 UBAP1LF5GYI3 381 aa10.64□□□□□ -0.71
PRKCH-209ENST00000553889 DYNC1I1O14576 645 aa10.64□□□□□ -0.71
PRKCH-209ENST00000553889 GNPATO15228 680 aa10.64□□□□□ -0.71
PRKCH-209ENST00000553889 TOB1P50616 345 aaPredicted RBP10.64□□□□□ -0.71
PRKCH-209ENST00000553889 MDM2Q00987 491 aaPredicted RBP10.64□□□□□ -0.71
PRKCH-209ENST00000553889 PKN1Q16512 942 aa10.64□□□□□ -0.71
PRKCH-209ENST00000553889 KANK3Q6NY19 840 aa10.64□□□□□ -0.71
PRKCH-209ENST00000553889 CATIPQ7Z7H3 387 aa10.64□□□□□ -0.71
PRKCH-209ENST00000553889 DIS3L2Q8IYB7 885 aaKnown RBP10.64□□□□□ -0.71
PRKCH-209ENST00000553889 KRI1Q8N9T8 703 aaKnown RBP10.64□□□□□ -0.71
PRKCH-209ENST00000553889 GJD4Q96KN9 370 aaPredicted RBP10.64□□□□□ -0.71
PRKCH-209ENST00000553889 C8orf37Q96NL8 207 aa10.64□□□□□ -0.71
PRKCH-209ENST00000553889 PHF20Q9BVI0 1012 aa10.64□□□□□ -0.71
PRKCH-209ENST00000553889 INCENPQ9NQS7 918 aa10.64□□□□□ -0.71
PRKCH-209ENST00000553889 GJB4Q9NTQ9 266 aa10.64□□□□□ -0.71
PRKCH-209ENST00000553889 SRP68Q9UHB9 627 aaKnown RBP10.64□□□□□ -0.71
PRKCH-209ENST00000553889 LAMB1P07942 1786 aa10.64□□□□□ -0.71
PRKCH-209ENST00000553889 MYH13Q9UKX3 1938 aa10.64□□□□□ -0.71
PRKCH-209ENST00000553889 MROH7-TTC4A0A0A0MT08 1334 aa10.63□□□□□ -0.71
PRKCH-209ENST00000553889 XDHP47989 1333 aa10.63□□□□□ -0.71
PRKCH-209ENST00000553889 BECN2A8MW95 431 aa10.63□□□□□ -0.71
PRKCH-209ENST00000553889 LDHCP07864 332 aa10.63□□□□□ -0.71
PRKCH-209ENST00000553889 HOXA10P31260 410 aaPredicted RBP10.63□□□□□ -0.71
PRKCH-209ENST00000553889 SYKP43405 635 aa10.63□□□□□ -0.71
PRKCH-209ENST00000553889 TRAPPC10P48553 1259 aa10.63□□□□□ -0.71
PRKCH-209ENST00000553889 FOSBP53539 338 aa10.63□□□□□ -0.71
PRKCH-209ENST00000553889 GSDMDP57764 484 aa10.63□□□□□ -0.71
PRKCH-209ENST00000553889 GSTO1P78417 241 aa10.63□□□□□ -0.71
PRKCH-209ENST00000553889 GNL2Q13823 731 aaKnown RBP10.63□□□□□ -0.71
PRKCH-209ENST00000553889 SLC27A3Q5K4L6 730 aa10.63□□□□□ -0.71
PRKCH-209ENST00000553889 TRAPPC3LQ5T215 181 aa10.63□□□□□ -0.71
PRKCH-209ENST00000553889 KRBA2Q6ZNG9 492 aa10.63□□□□□ -0.71
PRKCH-209ENST00000553889 TMTC3Q6ZXV5 915 aa10.63□□□□□ -0.71
PRKCH-209ENST00000553889 TMC4Q7Z404 712 aa10.63□□□□□ -0.71
PRKCH-209ENST00000553889 DGKHQ86XP1 1220 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms