RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 NECAB2Q7Z6G3 386 aa21.9■■□□□ 1.1
SYNE2-211ENST00000553801 CCDC84Q86UT8 332 aaPredicted RBP21.9■■□□□ 1.1
SYNE2-211ENST00000553801 ZNF280CQ8ND82 737 aa21.9■■□□□ 1.1
SYNE2-211ENST00000553801 CDCA7LQ96GN5 454 aa21.9■■□□□ 1.1
SYNE2-211ENST00000553801 NEUROD6Q96NK8 337 aa21.9■■□□□ 1.1
SYNE2-211ENST00000553801 MEIS3Q99687 375 aa21.9■■□□□ 1.1
SYNE2-211ENST00000553801 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.9■■□□□ 1.1
SYNE2-211ENST00000553801 SRGAP3O43295 1099 aa21.89■■□□□ 1.09
SYNE2-211ENST00000553801 GNAI3P08754 354 aa21.89■■□□□ 1.09
SYNE2-211ENST00000553801 GORABQ5T7V8 394 aa21.89■■□□□ 1.09
SYNE2-211ENST00000553801 PAWRQ96IZ0 340 aaKnown RBP21.89■■□□□ 1.09
SYNE2-211ENST00000553801 TRMT2AQ8IZ69 625 aaKnown RBP21.88■■□□□ 1.09
SYNE2-211ENST00000553801 ANKLE1Q8NAG6 615 aa21.88■■□□□ 1.09
SYNE2-211ENST00000553801 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.88■■□□□ 1.09
SYNE2-211ENST00000553801 USP17L5A8MUK1 530 aa21.87■■□□□ 1.09
SYNE2-211ENST00000553801 HMGCRP04035 888 aa21.87■■□□□ 1.09
SYNE2-211ENST00000553801 CAP2P40123 477 aa21.87■■□□□ 1.09
SYNE2-211ENST00000553801 SPATA5Q8NB90 893 aa21.87■■□□□ 1.09
SYNE2-211ENST00000553801 NSUN4Q96CB9 384 aaKnown RBP21.87■■□□□ 1.09
SYNE2-211ENST00000553801 AS3MTQ9HBK9 375 aa21.87■■□□□ 1.09
SYNE2-211ENST00000553801 RAI14Q9P0K7 980 aa21.87■■□□□ 1.09
SYNE2-211ENST00000553801 HMG20BQ9P0W2 317 aa21.87■■□□□ 1.09
SYNE2-211ENST00000553801 COL2A1P02458 1487 aaPredicted RBP21.87■■□□□ 1.09
SYNE2-211ENST00000553801 FAM196BA6NMK8 535 aa21.86■■□□□ 1.09
SYNE2-211ENST00000553801 HMGCS2P54868 508 aa21.86■■□□□ 1.09
SYNE2-211ENST00000553801 MTX1Q13505 466 aa21.86■■□□□ 1.09
SYNE2-211ENST00000553801 ZNF384Q8TF68 577 aa21.86■■□□□ 1.09
SYNE2-211ENST00000553801 HERC5Q9UII4 1024 aaKnown RBP21.86■■□□□ 1.09
SYNE2-211ENST00000553801 SZT2Q5T011 3432 aa21.86■■□□□ 1.09
SYNE2-211ENST00000553801 RANBP2P49792 3224 aaKnown RBP21.85■■□□□ 1.09
SYNE2-211ENST00000553801 SH3D19Q5HYK7 790 aa21.85■■□□□ 1.09
SYNE2-211ENST00000553801 TEX11Q8IYF3 940 aa21.85■■□□□ 1.09
SYNE2-211ENST00000553801 ARHGAP45Q92619 1136 aa21.85■■□□□ 1.09
SYNE2-211ENST00000553801 NOL10Q9BSC4 688 aaKnown RBP21.85■■□□□ 1.09
SYNE2-211ENST00000553801 ASCC2Q9H1I8 757 aaPredicted RBP21.85■■□□□ 1.09
SYNE2-211ENST00000553801 HMX1Q9NP08 348 aaPredicted RBP21.85■■□□□ 1.09
SYNE2-211ENST00000553801 STAP2Q9UGK3 403 aa21.85■■□□□ 1.09
SYNE2-211ENST00000553801 RPTORQ8N122 1335 aa21.84■■□□□ 1.09
SYNE2-211ENST00000553801 TBC1D9Q6ZT07 1266 aa21.84■■□□□ 1.09
SYNE2-211ENST00000553801 GJD2Q9UKL4 321 aa21.84■■□□□ 1.09
SYNE2-211ENST00000553801 UQCRFS1P1P0C7P4 283 aa21.83■■□□□ 1.09
SYNE2-211ENST00000553801 ARID4AP29374 1257 aaPredicted RBP21.83■■□□□ 1.09
SYNE2-211ENST00000553801 NBPF3Q9H094 633 aa21.83■■□□□ 1.09
SYNE2-211ENST00000553801 DHX36Q9H2U1 1008 aaKnown RBP21.83■■□□□ 1.09
SYNE2-211ENST00000553801 LRP2BPQ9P2M1 347 aa21.83■■□□□ 1.09
SYNE2-211ENST00000553801 PI4KBQ9UBF8 816 aa21.83■■□□□ 1.09
SYNE2-211ENST00000553801 LOC285556D6RIA3 1793 aa21.83■■□□□ 1.09
SYNE2-211ENST00000553801 IRX3P78415 501 aaPredicted RBP21.82■■□□□ 1.08
SYNE2-211ENST00000553801 G3BP1Q13283 466 aaKnown RBP eCLIP21.82■■□□□ 1.08
SYNE2-211ENST00000553801 PI16Q6UXB8 463 aa21.82■■□□□ 1.08
SYNE2-211ENST00000553801 SLC17A8Q8NDX2 589 aa21.82■■□□□ 1.08
SYNE2-211ENST00000553801 DIS3LQ8TF46 1054 aaKnown RBP21.82■■□□□ 1.08
SYNE2-211ENST00000553801 WDR18Q9BV38 432 aa21.82■■□□□ 1.08
SYNE2-211ENST00000553801 TMOD4Q9NZQ9 345 aa21.82■■□□□ 1.08
SYNE2-211ENST00000553801 MORF4L1Q9UBU8 362 aa21.82■■□□□ 1.08
SYNE2-211ENST00000553801 ATAD5Q96QE3 1844 aa21.81■■□□□ 1.08
SYNE2-211ENST00000553801 BAG3O95817 575 aa21.81■■□□□ 1.08
SYNE2-211ENST00000553801 PLCG2P16885 1265 aa21.81■■□□□ 1.08
SYNE2-211ENST00000553801 BMP8BP34820 402 aa21.81■■□□□ 1.08
SYNE2-211ENST00000553801 ASNSP08243 561 aa21.8■■□□□ 1.08
SYNE2-211ENST00000553801 RARSP54136 660 aaKnown RBP21.8■■□□□ 1.08
SYNE2-211ENST00000553801 BACE1P56817 501 aa21.8■■□□□ 1.08
SYNE2-211ENST00000553801 RRP1BQ14684 758 aaKnown RBP21.8■■□□□ 1.08
SYNE2-211ENST00000553801 C7orf61Q8IZ16 206 aa21.8■■□□□ 1.08
SYNE2-211ENST00000553801 GDF15Q99988 308 aa21.8■■□□□ 1.08
SYNE2-211ENST00000553801 ALPK3Q96L96 1907 aa21.79■■□□□ 1.08
SYNE2-211ENST00000553801 C19orf81C9J6K1 198 aa21.79■■□□□ 1.08
SYNE2-211ENST00000553801 SOX1O00570 391 aaPredicted RBP21.79■■□□□ 1.08
SYNE2-211ENST00000553801 GNAI2P04899 355 aa21.79■■□□□ 1.08
SYNE2-211ENST00000553801 HOXA7P31268 230 aaPredicted RBP21.79■■□□□ 1.08
SYNE2-211ENST00000553801 MCAMP43121 646 aa21.79■■□□□ 1.08
SYNE2-211ENST00000553801 FOXP4Q8IVH2 680 aaPredicted RBP21.79■■□□□ 1.08
SYNE2-211ENST00000553801 SH3RF3Q8TEJ3 882 aaPredicted RBP21.79■■□□□ 1.08
SYNE2-211ENST00000553801 LRCH3Q96II8 777 aa21.79■■□□□ 1.08
SYNE2-211ENST00000553801 NUDT12Q9BQG2 462 aa21.79■■□□□ 1.08
SYNE2-211ENST00000553801 TRIM34Q9BYJ4 488 aa21.79■■□□□ 1.08
SYNE2-211ENST00000553801 C11orf49Q9H6J7 331 aa21.79■■□□□ 1.08
SYNE2-211ENST00000553801 GINM1Q9NU53 330 aa21.79■■□□□ 1.08
SYNE2-211ENST00000553801 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.79■■□□□ 1.08
SYNE2-211ENST00000553801 IPO8O15397 1037 aaKnown RBP21.78■■□□□ 1.08
SYNE2-211ENST00000553801 MTMR2Q13614 643 aa21.78■■□□□ 1.08
SYNE2-211ENST00000553801 NAA16Q6N069 864 aaPredicted RBP21.78■■□□□ 1.08
SYNE2-211ENST00000553801 TRMT44Q8IYL2 757 aaKnown RBP21.78■■□□□ 1.08
SYNE2-211ENST00000553801 GPRC5AQ8NFJ5 357 aa21.78■■□□□ 1.08
SYNE2-211ENST00000553801 SOCS4Q8WXH5 440 aa21.78■■□□□ 1.08
SYNE2-211ENST00000553801 OGDHLQ9ULD0 1010 aa21.78■■□□□ 1.08
SYNE2-211ENST00000553801 XRCC5P13010 732 aaKnown RBP21.77■■□□□ 1.08
SYNE2-211ENST00000553801 CYP2B6P20813 491 aa21.77■■□□□ 1.08
SYNE2-211ENST00000553801 TRIM32Q13049 653 aa21.77■■□□□ 1.08
SYNE2-211ENST00000553801 GPR153Q6NV75 609 aa21.77■■□□□ 1.08
SYNE2-211ENST00000553801 TRIB2Q92519 343 aa21.77■■□□□ 1.08
SYNE2-211ENST00000553801 P2RX7Q99572 595 aaKnown RBP21.77■■□□□ 1.08
SYNE2-211ENST00000553801 AATFQ9NY61 560 aaKnown RBP eCLIP21.77■■□□□ 1.08
SYNE2-211ENST00000553801 ZMYND8Q9ULU4 1186 aaPredicted RBP21.77■■□□□ 1.08
SYNE2-211ENST00000553801 USP17L10C9JJH3 530 aa21.76■■□□□ 1.07
SYNE2-211ENST00000553801 PPP4CP60510 307 aa21.76■■□□□ 1.07
SYNE2-211ENST00000553801 HERVK_113P62684 666 aa21.76■■□□□ 1.07
SYNE2-211ENST00000553801 PDE3AQ14432 1141 aa21.76■■□□□ 1.07
SYNE2-211ENST00000553801 CCAR1Q8IX12 1150 aaKnown RBP21.76■■□□□ 1.07
SYNE2-211ENST00000553801 CRACR2BQ8N4Y2 399 aaPredicted RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 236.7 ms