RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 SH3BP5LQ7L8J4 393 aa12.16□□□□□ -0.46
ACTN1-210ENST00000553779 CCDC84Q86UT8 332 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-210ENST00000553779 CRACR2BQ8N4Y2 399 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-210ENST00000553779 ANKRD13CQ8N6S4 541 aa12.16□□□□□ -0.46
ACTN1-210ENST00000553779 FAM163AQ96GL9 167 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-210ENST00000553779 OSBPL5Q9H0X9 879 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-210ENST00000553779 AS3MTQ9HBK9 375 aa12.16□□□□□ -0.46
ACTN1-210ENST00000553779 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-210ENST00000553779 COLQQ9Y215 455 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-210ENST00000553779 NAV1Q8NEY1 1877 aa12.16□□□□□ -0.46
ACTN1-210ENST00000553779 COL2A1P02458 1487 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-210ENST00000553779 TFRCP02786 760 aaKnown RBP12.15□□□□□ -0.46
ACTN1-210ENST00000553779 INHAP05111 366 aa12.15□□□□□ -0.46
ACTN1-210ENST00000553779 GJB1P08034 283 aa12.15□□□□□ -0.46
ACTN1-210ENST00000553779 TRIM27P14373 513 aa12.15□□□□□ -0.46
ACTN1-210ENST00000553779 PLCG2P16885 1265 aa12.15□□□□□ -0.46
ACTN1-210ENST00000553779 ARID4AP29374 1257 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-210ENST00000553779 GJA8P48165 433 aa12.15□□□□□ -0.46
ACTN1-210ENST00000553779 FLT3LGP49771 235 aa12.15□□□□□ -0.46
ACTN1-210ENST00000553779 MTX1Q13505 466 aa12.15□□□□□ -0.46
ACTN1-210ENST00000553779 NAA16Q6N069 864 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-210ENST00000553779 CHRDL2Q6WN34 429 aa12.15□□□□□ -0.46
ACTN1-210ENST00000553779 NSUN4Q96CB9 384 aaKnown RBP12.15□□□□□ -0.46
ACTN1-210ENST00000553779 SHISA4Q96DD7 197 aa12.15□□□□□ -0.46
ACTN1-210ENST00000553779 TBC1D2Q9BYX2 928 aa12.15□□□□□ -0.46
ACTN1-210ENST00000553779 UNC93B1Q9H1C4 597 aa12.15□□□□□ -0.46
ACTN1-210ENST00000553779 CWC22Q9HCG8 908 aaKnown RBP12.15□□□□□ -0.46
ACTN1-210ENST00000553779 SNRKQ9NRH2 765 aa12.15□□□□□ -0.46
ACTN1-210ENST00000553779 GABRQQ9UN88 632 aa12.15□□□□□ -0.46
ACTN1-210ENST00000553779 NR2E3Q9Y5X4 410 aa12.15□□□□□ -0.46
ACTN1-210ENST00000553779 SLURP2P0DP57 97 aa12.14□□□□□ -0.47
ACTN1-210ENST00000553779 HMGCS2P54868 508 aa12.14□□□□□ -0.47
ACTN1-210ENST00000553779 RHBDL3P58872 404 aa12.14□□□□□ -0.47
ACTN1-210ENST00000553779 IRX3P78415 501 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-210ENST00000553779 SPP2Q13103 211 aa12.14□□□□□ -0.47
ACTN1-210ENST00000553779 TREML2Q5T2D2 321 aa12.14□□□□□ -0.47
ACTN1-210ENST00000553779 ZKSCAN2Q63HK3 967 aa12.14□□□□□ -0.47
ACTN1-210ENST00000553779 CCAR1Q8IX12 1150 aaKnown RBP12.14□□□□□ -0.47
ACTN1-210ENST00000553779 PROCA1Q8NCQ7 364 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-210ENST00000553779 ZNF280CQ8ND82 737 aa12.14□□□□□ -0.47
ACTN1-210ENST00000553779 SH3RF3Q8TEJ3 882 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-210ENST00000553779 U2AF1L4Q8WU68 220 aaKnown RBP12.14□□□□□ -0.47
ACTN1-210ENST00000553779 AATFQ9NY61 560 aaKnown RBP eCLIP12.14□□□□□ -0.47
ACTN1-210ENST00000553779 TMOD4Q9NZQ9 345 aa12.14□□□□□ -0.47
ACTN1-210ENST00000553779 HERC5Q9UII4 1024 aaKnown RBP12.14□□□□□ -0.47
ACTN1-210ENST00000553779 PNMA6EA0A0J9YXQ4 647 aa12.13□□□□□ -0.47
ACTN1-210ENST00000553779 USP17L5A8MUK1 530 aa12.13□□□□□ -0.47
ACTN1-210ENST00000553779 ZBTB22O15209 634 aa12.13□□□□□ -0.47
ACTN1-210ENST00000553779 TBC1D12O60347 775 aa12.13□□□□□ -0.47
ACTN1-210ENST00000553779 NPM3O75607 178 aaKnown RBP12.13□□□□□ -0.47
ACTN1-210ENST00000553779 BCAR3O75815 825 aa12.13□□□□□ -0.47
ACTN1-210ENST00000553779 HLA-DOAP06340 250 aa12.13□□□□□ -0.47
ACTN1-210ENST00000553779 MCAMP43121 646 aa12.13□□□□□ -0.47
ACTN1-210ENST00000553779 GCLCP48506 637 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-210ENST00000553779 FAM110CQ1W6H9 321 aa12.13□□□□□ -0.47
ACTN1-210ENST00000553779 MAPKAPK5Q8IW41 473 aa12.13□□□□□ -0.47
ACTN1-210ENST00000553779 ITPRIPQ8IWB1 547 aa12.13□□□□□ -0.47
ACTN1-210ENST00000553779 DHX36Q9H2U1 1008 aaKnown RBP12.13□□□□□ -0.47
ACTN1-210ENST00000553779 DDX60LQ5H9U9 1706 aaKnown RBP12.13□□□□□ -0.47
ACTN1-210ENST00000553779 MYH7P12883 1935 aa12.13□□□□□ -0.47
ACTN1-210ENST00000553779 EVI5O60447 810 aa12.12□□□□□ -0.47
ACTN1-210ENST00000553779 SURF6O75683 361 aaKnown RBP12.12□□□□□ -0.47
ACTN1-210ENST00000553779 FXR1P51114 621 aaKnown RBP eCLIP12.12□□□□□ -0.47
ACTN1-210ENST00000553779 TNNI3KQ59H18 835 aa12.12□□□□□ -0.47
ACTN1-210ENST00000553779 TMEM57Q8N5G2 664 aa12.12□□□□□ -0.47
ACTN1-210ENST00000553779 DEFB118Q96PH6 123 aa12.12□□□□□ -0.47
ACTN1-210ENST00000553779 PI4KBQ9UBF8 816 aa12.12□□□□□ -0.47
ACTN1-210ENST00000553779 TNNQ9UQP3 1299 aa12.12□□□□□ -0.47
ACTN1-210ENST00000553779 FPGT-TNNI3KV9GXZ4 949 aa12.12□□□□□ -0.47
ACTN1-210ENST00000553779 RANBP2P49792 3224 aaKnown RBP12.12□□□□□ -0.47
ACTN1-210ENST00000553779 PLXNB2O15031 1838 aa12.11□□□□□ -0.47
ACTN1-210ENST00000553779 SGPL1O95470 568 aa12.11□□□□□ -0.47
ACTN1-210ENST00000553779 ASNSP08243 561 aa12.11□□□□□ -0.47
ACTN1-210ENST00000553779 CAP2P40123 477 aa12.11□□□□□ -0.47
ACTN1-210ENST00000553779 MAP3K10Q02779 954 aa12.11□□□□□ -0.47
ACTN1-210ENST00000553779 IRF5Q13568 498 aa12.11□□□□□ -0.47
ACTN1-210ENST00000553779 MTMR2Q13614 643 aa12.11□□□□□ -0.47
ACTN1-210ENST00000553779 PDE3AQ14432 1141 aa12.11□□□□□ -0.47
ACTN1-210ENST00000553779 PXYLP1Q8TE99 480 aa12.11□□□□□ -0.47
ACTN1-210ENST00000553779 TGFBRAP1Q8WUH2 860 aa12.11□□□□□ -0.47
ACTN1-210ENST00000553779 FEZ1Q99689 392 aa12.11□□□□□ -0.47
ACTN1-210ENST00000553779 DBNDD2Q9BQY9 259 aa12.11□□□□□ -0.47
ACTN1-210ENST00000553779 C1orf115Q9H7X2 142 aa12.11□□□□□ -0.47
ACTN1-210ENST00000553779 SAP30BPQ9UHR5 308 aaKnown RBP12.11□□□□□ -0.47
ACTN1-210ENST00000553779 FRMPD3Q5JV73 1810 aa12.11□□□□□ -0.47
ACTN1-210ENST00000553779 FLT1P17948 1338 aa12.11□□□□□ -0.47
ACTN1-210ENST00000553779 IDH1O75874 414 aaKnown RBP12.1□□□□□ -0.47
ACTN1-210ENST00000553779 GDF11O95390 407 aa12.1□□□□□ -0.47
ACTN1-210ENST00000553779 HMGCRP04035 888 aa12.1□□□□□ -0.47
ACTN1-210ENST00000553779 USP5P45974 858 aa12.1□□□□□ -0.47
ACTN1-210ENST00000553779 HNRNPUQ00839 825 aaKnown RBP eCLIP12.1□□□□□ -0.47
ACTN1-210ENST00000553779 ZNF384Q8TF68 577 aa12.1□□□□□ -0.47
ACTN1-210ENST00000553779 ASCC2Q9H1I8 757 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-210ENST00000553779 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-210ENST00000553779 BAZ2AQ9UIF9 1905 aaKnown RBP12.09□□□□□ -0.47
ACTN1-210ENST00000553779 CAPN2P17655 700 aa12.09□□□□□ -0.47
ACTN1-210ENST00000553779 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.09□□□□□ -0.47
ACTN1-210ENST00000553779 BCL11AQ9H165 835 aa12.09□□□□□ -0.47
ACTN1-210ENST00000553779 GPR108Q9NPR9 543 aa12.09□□□□□ -0.47
ACTN1-210ENST00000553779 CYP7A1P22680 504 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms