RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 RASA3Q14644 834 aa9.52□□□□□ -0.89
CHPT1-208ENST00000552215 USP17L2Q6R6M4 530 aa9.52□□□□□ -0.89
CHPT1-208ENST00000552215 CYB5R4Q7L1T6 521 aa9.52□□□□□ -0.89
CHPT1-208ENST00000552215 RASGRP2Q7LDG7 609 aa9.52□□□□□ -0.89
CHPT1-208ENST00000552215 LRRC37A3O60309 1634 aa9.52□□□□□ -0.89
CHPT1-208ENST00000552215 GH2P01242 217 aa9.52□□□□□ -0.89
CHPT1-208ENST00000552215 NLRP5P59047 1200 aa9.52□□□□□ -0.89
CHPT1-208ENST00000552215 TGFB2P61812 414 aa9.52□□□□□ -0.89
CHPT1-208ENST00000552215 MAP1SQ66K74 1059 aaPredicted RBP9.52□□□□□ -0.89
CHPT1-208ENST00000552215 CTR9Q6PD62 1173 aa9.52□□□□□ -0.89
CHPT1-208ENST00000552215 DSCC1Q9BVC3 393 aa9.52□□□□□ -0.89
CHPT1-208ENST00000552215 TANGO6Q9C0B7 1094 aa9.52□□□□□ -0.89
CHPT1-208ENST00000552215 GGA3Q9NZ52 723 aa9.52□□□□□ -0.89
CHPT1-208ENST00000552215 SERPINB13Q9UIV8 391 aa9.52□□□□□ -0.89
CHPT1-208ENST00000552215 EGFRP00533 1210 aa9.52□□□□□ -0.89
CHPT1-208ENST00000552215 MYCP01106 439 aaPredicted RBP9.52□□□□□ -0.89
CHPT1-208ENST00000552215 HMGB1P09429 215 aaKnown RBP9.52□□□□□ -0.89
CHPT1-208ENST00000552215 NECTIN1Q15223 517 aa9.52□□□□□ -0.89
CHPT1-208ENST00000552215 SHROOM1Q2M3G4 852 aaPredicted RBP9.52□□□□□ -0.89
CHPT1-208ENST00000552215 CCDC174Q6PII3 467 aa9.52□□□□□ -0.89
CHPT1-208ENST00000552215 PKD2L1Q9P0L9 805 aa9.52□□□□□ -0.89
CHPT1-208ENST00000552215 PTPDC1A2A3K4 754 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 YDJCA8MPS7 323 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 TNNI2P48788 182 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 SSRP1Q08945 709 aaKnown RBP9.51□□□□□ -0.89
CHPT1-208ENST00000552215 CDAN1Q8IWY9 1227 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 KIFC2Q96AC6 838 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 ANGEL1Q9UNK9 670 aaKnown RBP9.51□□□□□ -0.89
CHPT1-208ENST00000552215 MROH7-TTC4A0A0A0MT08 1334 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 RIC1Q4ADV7 1423 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 SORBS3O60504 671 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 CLSTN1O94985 981 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 KIF4BQ2VIQ3 1234 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 STRIP1Q5VSL9 837 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 RSBN1LQ6PCB5 846 aaPredicted RBP9.51□□□□□ -0.89
CHPT1-208ENST00000552215 ALG1Q9BT22 464 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 SEC63Q9UGP8 760 aaKnown RBP9.51□□□□□ -0.89
CHPT1-208ENST00000552215 C5P01031 1676 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 SEMA3EO15041 775 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 IBSPP21815 317 aaPredicted RBP9.51□□□□□ -0.89
CHPT1-208ENST00000552215 ME1P48163 572 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 CDK8P49336 464 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 RBM25P49756 843 aaKnown RBP9.51□□□□□ -0.89
CHPT1-208ENST00000552215 SEPT2Q15019 361 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 KRT26Q7Z3Y9 468 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 FCHSD1Q86WN1 690 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 GPKOWQ92917 476 aaPredicted RBP eCLIP9.51□□□□□ -0.89
CHPT1-208ENST00000552215 CNNM2Q9H8M5 875 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 SALL3Q9BXA9 1300 aa9.51□□□□□ -0.89
CHPT1-208ENST00000552215 UBE2Q2LH0YL09 131 aa9.5□□□□□ -0.89
CHPT1-208ENST00000552215 SLC1A4P43007 532 aa9.5□□□□□ -0.89
CHPT1-208ENST00000552215 MCM2P49736 904 aa9.5□□□□□ -0.89
CHPT1-208ENST00000552215 SP4Q02446 784 aa9.5□□□□□ -0.89
CHPT1-208ENST00000552215 USP48Q86UV5 1035 aa9.5□□□□□ -0.89
CHPT1-208ENST00000552215 PICK1Q9NRD5 415 aa9.5□□□□□ -0.89
CHPT1-208ENST00000552215 LMNB1P20700 586 aa9.5□□□□□ -0.89
CHPT1-208ENST00000552215 STK38Q15208 465 aa9.5□□□□□ -0.89
CHPT1-208ENST00000552215 ZSCAN31Q96LW9 406 aaPredicted RBP9.5□□□□□ -0.89
CHPT1-208ENST00000552215 ITGB4P16144 1822 aa9.5□□□□□ -0.89
CHPT1-208ENST00000552215 AKR1B1P15121 316 aa9.5□□□□□ -0.89
CHPT1-208ENST00000552215 NF2P35240 595 aa9.5□□□□□ -0.89
CHPT1-208ENST00000552215 MOB2Q70IA6 237 aa9.5□□□□□ -0.89
CHPT1-208ENST00000552215 PAGR1Q9BTK6 254 aa9.5□□□□□ -0.89
CHPT1-208ENST00000552215 MYOZ2Q9NPC6 264 aa9.5□□□□□ -0.89
CHPT1-208ENST00000552215 DDX4Q9NQI0 724 aaKnown RBP9.5□□□□□ -0.89
CHPT1-208ENST00000552215 VPS54Q9P1Q0 977 aa9.5□□□□□ -0.89
CHPT1-208ENST00000552215 ABCA3Q99758 1704 aa9.49□□□□□ -0.89
CHPT1-208ENST00000552215 MARCKSP29966 332 aaPredicted RBP9.49□□□□□ -0.89
CHPT1-208ENST00000552215 CAMK4Q16566 473 aa9.49□□□□□ -0.89
CHPT1-208ENST00000552215 ABCB5Q2M3G0 1257 aa9.49□□□□□ -0.89
CHPT1-208ENST00000552215 PDILTQ8N807 584 aa9.49□□□□□ -0.89
CHPT1-208ENST00000552215 PNMA1Q8ND90 353 aa9.49□□□□□ -0.89
CHPT1-208ENST00000552215 TNPO1Q92973 898 aaKnown RBP9.49□□□□□ -0.89
CHPT1-208ENST00000552215 CD2APQ9Y5K6 639 aa9.49□□□□□ -0.89
CHPT1-208ENST00000552215 BTAF1O14981 1849 aa9.49□□□□□ -0.89
CHPT1-208ENST00000552215 DDTLA6NHG4 134 aaPredicted RBP9.49□□□□□ -0.89
CHPT1-208ENST00000552215 NFKBIEO00221 500 aa9.49□□□□□ -0.89
CHPT1-208ENST00000552215 XBP1P17861 261 aa9.49□□□□□ -0.89
CHPT1-208ENST00000552215 ICA1Q05084 483 aa9.49□□□□□ -0.89
CHPT1-208ENST00000552215 CAVIN1Q6NZI2 390 aaKnown RBP9.49□□□□□ -0.89
CHPT1-208ENST00000552215 ZNF654Q8IZM8 581 aa9.49□□□□□ -0.89
CHPT1-208ENST00000552215 RNF214Q8ND24 703 aa9.49□□□□□ -0.89
CHPT1-208ENST00000552215 WRNIP1Q96S55 665 aa9.49□□□□□ -0.89
CHPT1-208ENST00000552215 ZSCAN10Q96SZ4 725 aaPredicted RBP9.49□□□□□ -0.89
CHPT1-208ENST00000552215 ATP8A2Q9NTI2 1148 aa9.49□□□□□ -0.89
CHPT1-208ENST00000552215 STX6O43752 255 aa9.49□□□□□ -0.89
CHPT1-208ENST00000552215 NUCB2P80303 420 aa9.49□□□□□ -0.89
CHPT1-208ENST00000552215 ZKSCAN4Q969J2 545 aaPredicted RBP9.49□□□□□ -0.89
CHPT1-208ENST00000552215 RRAGCQ9HB90 399 aa9.49□□□□□ -0.89
CHPT1-208ENST00000552215 ARPP21Q9UBL0 812 aaPredicted RBP9.49□□□□□ -0.89
CHPT1-208ENST00000552215 SSBP05455 408 aaKnown RBP eCLIP9.48□□□□□ -0.89
CHPT1-208ENST00000552215 FMR1Q06787 632 aaKnown RBP eCLIP9.48□□□□□ -0.89
CHPT1-208ENST00000552215 PGBD1Q96JS3 809 aa9.48□□□□□ -0.89
CHPT1-208ENST00000552215 TCEAL9Q9UHQ7 104 aa9.48□□□□□ -0.89
CHPT1-208ENST00000552215 HACL1Q9UJ83 578 aa9.48□□□□□ -0.89
CHPT1-208ENST00000552215 FLT1P17948 1338 aa9.48□□□□□ -0.89
CHPT1-208ENST00000552215 TAL1P17542 331 aaPredicted RBP9.48□□□□□ -0.89
CHPT1-208ENST00000552215 ZNF76P36508 570 aa9.48□□□□□ -0.89
CHPT1-208ENST00000552215 ANAPC15P60006 121 aa9.48□□□□□ -0.89
CHPT1-208ENST00000552215 UBXN2AP68543 259 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms