RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 G3BP1Q13283 466 aaKnown RBP eCLIP13.36□□□□□ -0.27
PFDN5-210ENST00000550513 TBC1D9Q6ZT07 1266 aa13.36□□□□□ -0.27
PFDN5-210ENST00000550513 CCDC84Q86UT8 332 aaPredicted RBP13.36□□□□□ -0.27
PFDN5-210ENST00000550513 NKX2-3Q8TAU0 364 aa13.36□□□□□ -0.27
PFDN5-210ENST00000550513 NOL10Q9BSC4 688 aaKnown RBP13.36□□□□□ -0.27
PFDN5-210ENST00000550513 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.36□□□□□ -0.27
PFDN5-210ENST00000550513 BIN2Q9UBW5 565 aaPredicted RBP13.36□□□□□ -0.27
PFDN5-210ENST00000550513 PNMA3Q9UL41 463 aa13.36□□□□□ -0.27
PFDN5-210ENST00000550513 AGTPBP1Q9UPW5 1226 aa13.36□□□□□ -0.27
PFDN5-210ENST00000550513 CEP290O15078 2479 aa13.35□□□□□ -0.27
PFDN5-210ENST00000550513 TNPO2O14787 897 aaKnown RBP13.35□□□□□ -0.27
PFDN5-210ENST00000550513 TEX11Q8IYF3 940 aa13.35□□□□□ -0.27
PFDN5-210ENST00000550513 RNF208Q9H0X6 261 aa13.35□□□□□ -0.27
PFDN5-210ENST00000550513 LRP2BPQ9P2M1 347 aa13.35□□□□□ -0.27
PFDN5-210ENST00000550513 GABRQQ9UN88 632 aa13.35□□□□□ -0.27
PFDN5-210ENST00000550513 GJA8P48165 433 aa13.34□□□□□ -0.27
PFDN5-210ENST00000550513 OS9Q13438 667 aaPredicted RBP13.34□□□□□ -0.27
PFDN5-210ENST00000550513 TTC39AQ5SRH9 613 aa13.34□□□□□ -0.27
PFDN5-210ENST00000550513 TREML2Q5T2D2 321 aa13.34□□□□□ -0.27
PFDN5-210ENST00000550513 ZKSCAN2Q63HK3 967 aa13.34□□□□□ -0.27
PFDN5-210ENST00000550513 TMEM57Q8N5G2 664 aa13.34□□□□□ -0.27
PFDN5-210ENST00000550513 PROCA1Q8NCQ7 364 aaPredicted RBP13.34□□□□□ -0.27
PFDN5-210ENST00000550513 TBC1D2Q9BYX2 928 aa13.34□□□□□ -0.27
PFDN5-210ENST00000550513 ADCY3O60266 1144 aa13.33□□□□□ -0.28
PFDN5-210ENST00000550513 GJB1P08034 283 aa13.33□□□□□ -0.28
PFDN5-210ENST00000550513 FLT3LGP49771 235 aa13.33□□□□□ -0.28
PFDN5-210ENST00000550513 FAM110CQ1W6H9 321 aa13.33□□□□□ -0.28
PFDN5-210ENST00000550513 TNNI3KQ59H18 835 aa13.33□□□□□ -0.28
PFDN5-210ENST00000550513 NAA16Q6N069 864 aaPredicted RBP13.33□□□□□ -0.28
PFDN5-210ENST00000550513 ANKRD13CQ8N6S4 541 aa13.33□□□□□ -0.28
PFDN5-210ENST00000550513 ZNF280CQ8ND82 737 aa13.33□□□□□ -0.28
PFDN5-210ENST00000550513 SH3RF3Q8TEJ3 882 aaPredicted RBP13.33□□□□□ -0.28
PFDN5-210ENST00000550513 AATFQ9NY61 560 aaKnown RBP eCLIP13.33□□□□□ -0.28
PFDN5-210ENST00000550513 HERC5Q9UII4 1024 aaKnown RBP13.33□□□□□ -0.28
PFDN5-210ENST00000550513 COLQQ9Y215 455 aaPredicted RBP13.33□□□□□ -0.28
PFDN5-210ENST00000550513 FPGT-TNNI3KV9GXZ4 949 aa13.33□□□□□ -0.28
PFDN5-210ENST00000550513 H0YGN5 161 aa13.32□□□□□ -0.28
PFDN5-210ENST00000550513 INHAP05111 366 aa13.32□□□□□ -0.28
PFDN5-210ENST00000550513 ELNP15502 786 aa13.32□□□□□ -0.28
PFDN5-210ENST00000550513 FXR1P51114 621 aaKnown RBP eCLIP13.32□□□□□ -0.28
PFDN5-210ENST00000550513 HMGCS2P54868 508 aa13.32□□□□□ -0.28
PFDN5-210ENST00000550513 SPP2Q13103 211 aa13.32□□□□□ -0.28
PFDN5-210ENST00000550513 PABPC4Q13310 644 aaKnown RBP eCLIP13.32□□□□□ -0.281e-11■■■■□ 25.8
PFDN5-210ENST00000550513 IRF5Q13568 498 aa13.32□□□□□ -0.28
PFDN5-210ENST00000550513 CCDC158Q5M9N0 1113 aa13.32□□□□□ -0.28
PFDN5-210ENST00000550513 FTSJ3Q8IY81 847 aaKnown RBP13.32□□□□□ -0.28
PFDN5-210ENST00000550513 U2AF1L4Q8WU68 220 aaKnown RBP13.32□□□□□ -0.28
PFDN5-210ENST00000550513 HTATIP2Q9BUP3 242 aa13.32□□□□□ -0.28
PFDN5-210ENST00000550513 UNC93B1Q9H1C4 597 aa13.32□□□□□ -0.28
PFDN5-210ENST00000550513 AS3MTQ9HBK9 375 aa13.32□□□□□ -0.28
PFDN5-210ENST00000550513 GPR108Q9NPR9 543 aa13.32□□□□□ -0.28
PFDN5-210ENST00000550513 SNRKQ9NRH2 765 aa13.32□□□□□ -0.28
PFDN5-210ENST00000550513 TAOK2Q9UL54 1235 aa13.32□□□□□ -0.28
PFDN5-210ENST00000550513 FLT1P17948 1338 aa13.32□□□□□ -0.28
PFDN5-210ENST00000550513 FARP2O94887 1054 aaPredicted RBP13.31□□□□□ -0.28
PFDN5-210ENST00000550513 BAG3O95817 575 aa13.31□□□□□ -0.28
PFDN5-210ENST00000550513 PLCG2P16885 1265 aa13.31□□□□□ -0.28
PFDN5-210ENST00000550513 CAP2P40123 477 aa13.31□□□□□ -0.28
PFDN5-210ENST00000550513 POLA2Q14181 598 aa13.31□□□□□ -0.28
PFDN5-210ENST00000550513 SSH3Q8TE77 659 aa13.31□□□□□ -0.28
PFDN5-210ENST00000550513 PXYLP1Q8TE99 480 aa13.31□□□□□ -0.28
PFDN5-210ENST00000550513 DPF3Q92784 378 aa13.31□□□□□ -0.28
PFDN5-210ENST00000550513 COA7Q96BR5 231 aa13.31□□□□□ -0.28
PFDN5-210ENST00000550513 DBNDD2Q9BQY9 259 aa13.31□□□□□ -0.28
PFDN5-210ENST00000550513 DHX36Q9H2U1 1008 aaKnown RBP13.31□□□□□ -0.28
PFDN5-210ENST00000550513 C1orf115Q9H7X2 142 aa13.31□□□□□ -0.28
PFDN5-210ENST00000550513 PI4KBQ9UBF8 816 aa13.31□□□□□ -0.28
PFDN5-210ENST00000550513 PARP14Q460N5 1801 aa13.31□□□□□ -0.28
PFDN5-210ENST00000550513 BAZ2AQ9UIF9 1905 aaKnown RBP13.31□□□□□ -0.28
PFDN5-210ENST00000550513 USP17L5A8MUK1 530 aa13.3□□□□□ -0.28
PFDN5-210ENST00000550513 GCLCP48506 637 aaPredicted RBP13.3□□□□□ -0.28
PFDN5-210ENST00000550513 RRP1BQ14684 758 aaKnown RBP13.3□□□□□ -0.28
PFDN5-210ENST00000550513 UBE2Q1Q7Z7E8 422 aa13.3□□□□□ -0.28
PFDN5-210ENST00000550513 ITPRIPQ8IWB1 547 aa13.3□□□□□ -0.28
PFDN5-210ENST00000550513 TRIM34Q9BYJ4 488 aa13.3□□□□□ -0.28
PFDN5-210ENST00000550513 TRIOBPQ9H2D6 2365 aa13.3□□□□□ -0.28
PFDN5-210ENST00000550513 A0A0G2JMZ2 1700 aa13.3□□□□□ -0.28
PFDN5-210ENST00000550513 SURF6O75683 361 aaKnown RBP13.29□□□□□ -0.28
PFDN5-210ENST00000550513 SGPL1O95470 568 aa13.29□□□□□ -0.28
PFDN5-210ENST00000550513 CYP2E1P05181 493 aaPredicted RBP13.29□□□□□ -0.28
PFDN5-210ENST00000550513 ASNSP08243 561 aa13.29□□□□□ -0.28
PFDN5-210ENST00000550513 MTMR2Q13614 643 aa13.29□□□□□ -0.28
PFDN5-210ENST00000550513 SH3D19Q5HYK7 790 aa13.29□□□□□ -0.28
PFDN5-210ENST00000550513 CHRDL2Q6WN34 429 aa13.29□□□□□ -0.28
PFDN5-210ENST00000550513 ADGRA1Q86SQ6 560 aa13.29□□□□□ -0.28
PFDN5-210ENST00000550513 MAPKAPK5Q8IW41 473 aa13.29□□□□□ -0.28
PFDN5-210ENST00000550513 CRACR2BQ8N4Y2 399 aaPredicted RBP13.29□□□□□ -0.28
PFDN5-210ENST00000550513 TGFBRAP1Q8WUH2 860 aa13.29□□□□□ -0.28
PFDN5-210ENST00000550513 DNAJC18Q9H819 358 aa13.29□□□□□ -0.28
PFDN5-210ENST00000550513 IGSF3O75054 1194 aa13.28□□□□□ -0.28
PFDN5-210ENST00000550513 ZAP70P43403 619 aa13.28□□□□□ -0.28
PFDN5-210ENST00000550513 PPP4CP60510 307 aa13.28□□□□□ -0.28
PFDN5-210ENST00000550513 ATP8B2P98198 1209 aa13.28□□□□□ -0.28
PFDN5-210ENST00000550513 HNRNPUQ00839 825 aaKnown RBP eCLIP13.28□□□□□ -0.28
PFDN5-210ENST00000550513 ZNF512BQ96KM6 892 aaPredicted RBP13.28□□□□□ -0.28
PFDN5-210ENST00000550513 DEFB118Q96PH6 123 aa13.28□□□□□ -0.28
PFDN5-210ENST00000550513 ASCC2Q9H1I8 757 aaPredicted RBP13.28□□□□□ -0.28
PFDN5-210ENST00000550513 PAK6Q9NQU5 681 aaPredicted RBP13.28□□□□□ -0.28
PFDN5-210ENST00000550513 TLR7Q9NYK1 1049 aaKnown RBP13.28□□□□□ -0.28
PFDN5-210ENST00000550513 TMOD4Q9NZQ9 345 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms