RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 UBXN2AP68543 259 aa14.32□□□□□ -0.12
SMARCD1-208ENST00000550280 SPP2Q13103 211 aa14.32□□□□□ -0.12
SMARCD1-208ENST00000550280 SPTY2D1Q68D10 685 aaPredicted RBP14.32□□□□□ -0.12
SMARCD1-208ENST00000550280 PXYLP1Q8TE99 480 aa14.32□□□□□ -0.12
SMARCD1-208ENST00000550280 NEUROD6Q96NK8 337 aa14.32□□□□□ -0.12
SMARCD1-208ENST00000550280 DNAJC18Q9H819 358 aa14.32□□□□□ -0.12
SMARCD1-208ENST00000550280 PAK6Q9NQU5 681 aaPredicted RBP14.32□□□□□ -0.12
SMARCD1-208ENST00000550280 AKAP2Q9Y2D5 859 aa14.32□□□□□ -0.12
SMARCD1-208ENST00000550280 ZBTB7BO15156 539 aaPredicted RBP14.31□□□□□ -0.12
SMARCD1-208ENST00000550280 PEX10O60683 326 aa14.31□□□□□ -0.12
SMARCD1-208ENST00000550280 GNAI3P08754 354 aa14.31□□□□□ -0.12
SMARCD1-208ENST00000550280 FAM110CQ1W6H9 321 aa14.31□□□□□ -0.12
SMARCD1-208ENST00000550280 ADGRA1Q86SQ6 560 aa14.31□□□□□ -0.12
SMARCD1-208ENST00000550280 SLF2Q8IX21 1173 aa14.31□□□□□ -0.12
SMARCD1-208ENST00000550280 PROCA1Q8NCQ7 364 aaPredicted RBP14.31□□□□□ -0.12
SMARCD1-208ENST00000550280 SH3RF3Q8TEJ3 882 aaPredicted RBP14.31□□□□□ -0.12
SMARCD1-208ENST00000550280 SMCR8Q8TEV9 937 aaPredicted RBP14.31□□□□□ -0.12
SMARCD1-208ENST00000550280 DIS3LQ8TF46 1054 aaKnown RBP14.31□□□□□ -0.12
SMARCD1-208ENST00000550280 DEFB118Q96PH6 123 aa14.31□□□□□ -0.12
SMARCD1-208ENST00000550280 CRISPLD2Q9H0B8 497 aa14.31□□□□□ -0.12
SMARCD1-208ENST00000550280 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.31□□□□□ -0.12
SMARCD1-208ENST00000550280 BCAR3O75815 825 aa14.3□□□□□ -0.12
SMARCD1-208ENST00000550280 CAP2P40123 477 aa14.3□□□□□ -0.12
SMARCD1-208ENST00000550280 HMGCS2P54868 508 aa14.3□□□□□ -0.12
SMARCD1-208ENST00000550280 TRIM32Q13049 653 aa14.3□□□□□ -0.12
SMARCD1-208ENST00000550280 SH3D19Q5HYK7 790 aa14.3□□□□□ -0.12
SMARCD1-208ENST00000550280 POTEEQ6S8J3 1075 aa14.3□□□□□ -0.12
SMARCD1-208ENST00000550280 GJD2Q9UKL4 321 aa14.3□□□□□ -0.12
SMARCD1-208ENST00000550280 HDAC5Q9UQL6 1122 aa14.3□□□□□ -0.12
SMARCD1-208ENST00000550280 DOCK3Q8IZD9 2030 aa14.29□□□□□ -0.12
SMARCD1-208ENST00000550280 SOX1O00570 391 aaPredicted RBP14.29□□□□□ -0.12
SMARCD1-208ENST00000550280 MNX1P50219 401 aaPredicted RBP14.29□□□□□ -0.12
SMARCD1-208ENST00000550280 ZNF280CQ8ND82 737 aa14.29□□□□□ -0.12
SMARCD1-208ENST00000550280 HTATIP2Q9BUP3 242 aa14.29□□□□□ -0.12
SMARCD1-208ENST00000550280 ASCC2Q9H1I8 757 aaPredicted RBP14.29□□□□□ -0.12
SMARCD1-208ENST00000550280 PLXNB2O15031 1838 aa14.28□□□□□ -0.12
SMARCD1-208ENST00000550280 TEX11Q8IYF3 940 aa14.28□□□□□ -0.12
SMARCD1-208ENST00000550280 CLUAP1Q96AJ1 413 aa14.28□□□□□ -0.12
SMARCD1-208ENST00000550280 ALPK3Q96L96 1907 aa14.28□□□□□ -0.12
SMARCD1-208ENST00000550280 DBNDD2Q9BQY9 259 aa14.28□□□□□ -0.12
SMARCD1-208ENST00000550280 SNRKQ9NRH2 765 aa14.28□□□□□ -0.12
SMARCD1-208ENST00000550280 RAI14Q9P0K7 980 aa14.28□□□□□ -0.12
SMARCD1-208ENST00000550280 ATAD5Q96QE3 1844 aa14.27□□□□□ -0.12
SMARCD1-208ENST00000550280 MAP4K4O95819 1239 aaPredicted RBP14.27□□□□□ -0.13
SMARCD1-208ENST00000550280 GNAI2P04899 355 aa14.27□□□□□ -0.13
SMARCD1-208ENST00000550280 LDHCP07864 332 aa14.27□□□□□ -0.13
SMARCD1-208ENST00000550280 GSTO1P78417 241 aa14.27□□□□□ -0.13
SMARCD1-208ENST00000550280 POLA2Q14181 598 aa14.27□□□□□ -0.13
SMARCD1-208ENST00000550280 ATF7IPQ6VMQ6 1270 aa14.27□□□□□ -0.13
SMARCD1-208ENST00000550280 METTL16Q86W50 562 aaKnown RBP14.27□□□□□ -0.13
SMARCD1-208ENST00000550280 PAWRQ96IZ0 340 aaKnown RBP14.27□□□□□ -0.13
SMARCD1-208ENST00000550280 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.27□□□□□ -0.13
SMARCD1-208ENST00000550280 TXNRD2Q9NNW7 524 aa14.27□□□□□ -0.13
SMARCD1-208ENST00000550280 AATFQ9NY61 560 aaKnown RBP eCLIP14.27□□□□□ -0.13
SMARCD1-208ENST00000550280 MORF4L1Q9UBU8 362 aa14.27□□□□□ -0.13
SMARCD1-208ENST00000550280 TAOK2Q9UL54 1235 aa14.27□□□□□ -0.13
SMARCD1-208ENST00000550280 FLT1P17948 1338 aa14.26□□□□□ -0.13
SMARCD1-208ENST00000550280 USP17L5A8MUK1 530 aa14.26□□□□□ -0.13
SMARCD1-208ENST00000550280 TFRCP02786 760 aaKnown RBP14.26□□□□□ -0.13
SMARCD1-208ENST00000550280 CYP2E1P05181 493 aaPredicted RBP14.26□□□□□ -0.13
SMARCD1-208ENST00000550280 PPP4CP60510 307 aa14.26□□□□□ -0.13
SMARCD1-208ENST00000550280 MTMR2Q13614 643 aa14.26□□□□□ -0.13
SMARCD1-208ENST00000550280 TMEM57Q8N5G2 664 aa14.26□□□□□ -0.13
SMARCD1-208ENST00000550280 TRIB2Q92519 343 aa14.26□□□□□ -0.13
SMARCD1-208ENST00000550280 COA7Q96BR5 231 aa14.26□□□□□ -0.13
SMARCD1-208ENST00000550280 WDR18Q9BV38 432 aa14.26□□□□□ -0.13
SMARCD1-208ENST00000550280 HERC5Q9UII4 1024 aaKnown RBP14.26□□□□□ -0.13
SMARCD1-208ENST00000550280 PNMA3Q9UL41 463 aa14.26□□□□□ -0.13
SMARCD1-208ENST00000550280 MAST2Q6P0Q8 1798 aa14.25□□□□□ -0.13
SMARCD1-208ENST00000550280 UQCRFS1P1P0C7P4 283 aa14.25□□□□□ -0.13
SMARCD1-208ENST00000550280 GCLCP48506 637 aaPredicted RBP14.25□□□□□ -0.13
SMARCD1-208ENST00000550280 TNNI3KQ59H18 835 aa14.25□□□□□ -0.13
SMARCD1-208ENST00000550280 GORABQ5T7V8 394 aa14.25□□□□□ -0.13
SMARCD1-208ENST00000550280 MAPKAPK5Q8IW41 473 aa14.25□□□□□ -0.13
SMARCD1-208ENST00000550280 P2RX7Q99572 595 aaKnown RBP14.25□□□□□ -0.13
SMARCD1-208ENST00000550280 PIH1D3Q9NQM4 214 aaKnown RBP14.25□□□□□ -0.13
SMARCD1-208ENST00000550280 TLR7Q9NYK1 1049 aaKnown RBP14.25□□□□□ -0.13
SMARCD1-208ENST00000550280 LRP2BPQ9P2M1 347 aa14.25□□□□□ -0.13
SMARCD1-208ENST00000550280 STAP2Q9UGK3 403 aa14.25□□□□□ -0.13
SMARCD1-208ENST00000550280 NR2E3Q9Y5X4 410 aa14.25□□□□□ -0.13
SMARCD1-208ENST00000550280 FPGT-TNNI3KV9GXZ4 949 aa14.25□□□□□ -0.13
SMARCD1-208ENST00000550280 EVI5O60447 810 aa14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 GDF11O95390 407 aa14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 HMGCRP04035 888 aa14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 HOXA7P31268 230 aaPredicted RBP14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 ZAP70P43403 619 aa14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 BACE1P56817 501 aa14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 DYNLL1P63167 89 aaKnown RBP14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 G3BP1Q13283 466 aaKnown RBP eCLIP14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 MAP3K21Q5TCX8 1036 aa14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 NAA16Q6N069 864 aaPredicted RBP14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 SSH3Q8TE77 659 aa14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 TGFBRAP1Q8WUH2 860 aa14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 FRAT1Q92837 279 aaPredicted RBP14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 LRCH3Q96II8 777 aa14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 TBC1D2Q9BYX2 928 aa14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 GPR108Q9NPR9 543 aa14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 PI4KBQ9UBF8 816 aa14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 PALD1Q9ULE6 856 aa14.24□□□□□ -0.13
SMARCD1-208ENST00000550280 COL6A3P12111 3177 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms