RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 MAP2K3P46734 347 aa12.63□□□□□ -0.39
PRIM1-204ENST00000549549 VHLLQ6RSH7 139 aa12.63□□□□□ -0.39
PRIM1-204ENST00000549549 STAG1Q8WVM7 1258 aa12.63□□□□□ -0.39
PRIM1-204ENST00000549549 SPATA9Q9BWV2 254 aa12.63□□□□□ -0.39
PRIM1-204ENST00000549549 EPN3Q9H201 632 aa12.63□□□□□ -0.39
PRIM1-204ENST00000549549 DDX56Q9NY93 547 aaKnown RBP12.63□□□□□ -0.39
PRIM1-204ENST00000549549 GMPR2Q9P2T1 348 aaKnown RBP12.63□□□□□ -0.39
PRIM1-204ENST00000549549 FAM153BP0C7A2 387 aa12.62□□□□□ -0.39
PRIM1-204ENST00000549549 PLCG1P19174 1290 aa12.62□□□□□ -0.39
PRIM1-204ENST00000549549 PDE4BQ07343 736 aa12.62□□□□□ -0.39
PRIM1-204ENST00000549549 KIF4BQ2VIQ3 1234 aa12.62□□□□□ -0.39
PRIM1-204ENST00000549549 TMEM67Q5HYA8 995 aa12.62□□□□□ -0.39
PRIM1-204ENST00000549549 ZC3H12BQ5HYM0 836 aaKnown RBP12.62□□□□□ -0.39
PRIM1-204ENST00000549549 FAM117BQ6P1L5 589 aa12.62□□□□□ -0.39
PRIM1-204ENST00000549549 KRT26Q7Z3Y9 468 aa12.62□□□□□ -0.39
PRIM1-204ENST00000549549 SLC9A7Q96T83 725 aa12.62□□□□□ -0.39
PRIM1-204ENST00000549549 ADAM30Q9UKF2 790 aa12.62□□□□□ -0.39
PRIM1-204ENST00000549549 PLAAQ9Y263 795 aa12.62□□□□□ -0.39
PRIM1-204ENST00000549549 LINC01387J3KSC0 135 aa12.61□□□□□ -0.39
PRIM1-204ENST00000549549 TM4SF5O14894 197 aa12.61□□□□□ -0.39
PRIM1-204ENST00000549549 ALAS2P22557 587 aa12.61□□□□□ -0.39
PRIM1-204ENST00000549549 CDC25BP30305 580 aa12.61□□□□□ -0.39
PRIM1-204ENST00000549549 PLEKHG6Q3KR16 790 aa12.61□□□□□ -0.39
PRIM1-204ENST00000549549 NUDT8Q8WV74 236 aa12.61□□□□□ -0.39
PRIM1-204ENST00000549549 NSFL1CQ9UNZ2 370 aaKnown RBP12.61□□□□□ -0.39
PRIM1-204ENST00000549549 FSCN2O14926 492 aa12.6□□□□□ -0.39
PRIM1-204ENST00000549549 ADCY3O60266 1144 aa12.6□□□□□ -0.39
PRIM1-204ENST00000549549 CTSBP07858 339 aa12.6□□□□□ -0.39
PRIM1-204ENST00000549549 HNRNPUQ00839 825 aaKnown RBP eCLIP12.6□□□□□ -0.39
PRIM1-204ENST00000549549 RING1Q06587 406 aa12.6□□□□□ -0.39
PRIM1-204ENST00000549549 ZBTB38Q8NAP3 1195 aaPredicted RBP12.6□□□□□ -0.39
PRIM1-204ENST00000549549 KLHL6Q8WZ60 621 aa12.6□□□□□ -0.39
PRIM1-204ENST00000549549 SLC26A8Q96RN1 970 aa12.6□□□□□ -0.39
PRIM1-204ENST00000549549 CHMP4AQ9BY43 222 aa12.6□□□□□ -0.39
PRIM1-204ENST00000549549 IRF2BPLQ9H1B7 796 aa12.6□□□□□ -0.39
PRIM1-204ENST00000549549 TYW1Q9NV66 732 aaKnown RBP12.6□□□□□ -0.39
PRIM1-204ENST00000549549 CD2APQ9Y5K6 639 aa12.6□□□□□ -0.39
PRIM1-204ENST00000549549 SLC10A6Q3KNW5 377 aa12.59□□□□□ -0.39
PRIM1-204ENST00000549549 ZC3H12AQ5D1E8 599 aaKnown RBP12.59□□□□□ -0.39
PRIM1-204ENST00000549549 TXNDC11Q6PKC3 985 aa12.59□□□□□ -0.39
PRIM1-204ENST00000549549 NOL8Q76FK4 1167 aaKnown RBP12.59□□□□□ -0.39
PRIM1-204ENST00000549549 ELMO3Q96BJ8 720 aa12.59□□□□□ -0.39
PRIM1-204ENST00000549549 WDR89Q96FK6 387 aaPredicted RBP12.59□□□□□ -0.39
PRIM1-204ENST00000549549 GGA1Q9UJY5 639 aa12.59□□□□□ -0.39
PRIM1-204ENST00000549549 SUSD5O60279 629 aa12.58□□□□□ -0.4
PRIM1-204ENST00000549549 AFF1P51825 1210 aaKnown RBP12.58□□□□□ -0.4
PRIM1-204ENST00000549549 MBIPQ9NS73 344 aa12.58□□□□□ -0.4
PRIM1-204ENST00000549549 ZNF214Q9UL59 606 aaPredicted RBP12.58□□□□□ -0.4
PRIM1-204ENST00000549549 CCDC163A0A0D9SF12 145 aa12.57□□□□□ -0.4
PRIM1-204ENST00000549549 IQCA1LA6NCM1 817 aa12.57□□□□□ -0.4
PRIM1-204ENST00000549549 HCLS1P14317 486 aaPredicted RBP12.57□□□□□ -0.4
PRIM1-204ENST00000549549 LIG1P18858 919 aa12.57□□□□□ -0.4
PRIM1-204ENST00000549549 LRRC47Q8N1G4 583 aaKnown RBP12.57□□□□□ -0.4
PRIM1-204ENST00000549549 KLHDC7BQ96G42 594 aa12.57□□□□□ -0.4
PRIM1-204ENST00000549549 SGSM3Q96HU1 749 aa12.57□□□□□ -0.4
PRIM1-204ENST00000549549 JPH1Q9HDC5 661 aaPredicted RBP12.57□□□□□ -0.4
PRIM1-204ENST00000549549 PCDHB10Q9UN67 800 aa12.57□□□□□ -0.4
PRIM1-204ENST00000549549 PCDHGC5Q9Y5F6 944 aa12.57□□□□□ -0.4
PRIM1-204ENST00000549549 SYNGAP1Q96PV0 1343 aa12.57□□□□□ -0.4
PRIM1-204ENST00000549549 DCDC2CA8MYV0 355 aa12.56□□□□□ -0.4
PRIM1-204ENST00000549549 SLC7A5Q01650 507 aa12.56□□□□□ -0.4
PRIM1-204ENST00000549549 KIAA1211LQ6NV74 962 aa12.56□□□□□ -0.4
PRIM1-204ENST00000549549 KLHL23Q8NBE8 558 aa12.56□□□□□ -0.4
PRIM1-204ENST00000549549 CHURC1-FNTBB4DL54 471 aa12.55□□□□□ -0.4
PRIM1-204ENST00000549549 PARNO95453 639 aaKnown RBP12.55□□□□□ -0.4
PRIM1-204ENST00000549549 GRK4P32298 578 aa12.55□□□□□ -0.4
PRIM1-204ENST00000549549 CCNFP41002 786 aa12.55□□□□□ -0.4
PRIM1-204ENST00000549549 PDE3AQ14432 1141 aa12.55□□□□□ -0.4
PRIM1-204ENST00000549549 TM4SF20Q53R12 229 aa12.55□□□□□ -0.4
PRIM1-204ENST00000549549 SLCO4C1Q6ZQN7 724 aa12.55□□□□□ -0.4
PRIM1-204ENST00000549549 C12orf40Q86WS4 652 aa12.55□□□□□ -0.4
PRIM1-204ENST00000549549 NINJ1Q92982 152 aa12.55□□□□□ -0.4
PRIM1-204ENST00000549549 ACSF2Q96CM8 615 aaPredicted RBP12.55□□□□□ -0.4
PRIM1-204ENST00000549549 WNT10AQ9GZT5 417 aa12.55□□□□□ -0.4
PRIM1-204ENST00000549549 RFPL3O75679 317 aa12.54□□□□□ -0.4
PRIM1-204ENST00000549549 PGRP06401 933 aa12.54□□□□□ -0.4
PRIM1-204ENST00000549549 SUZ12Q15022 739 aaKnown RBP12.54□□□□□ -0.4
PRIM1-204ENST00000549549 ILDR2Q71H61 639 aa12.54□□□□□ -0.4
PRIM1-204ENST00000549549 GOLGA6L1Q8N7Z2 621 aa12.54□□□□□ -0.4
PRIM1-204ENST00000549549 ALBP02768 609 aa12.53□□□□□ -0.4
PRIM1-204ENST00000549549 PDGFRBP09619 1106 aa12.53□□□□□ -0.4
PRIM1-204ENST00000549549 HP1BP3Q5SSJ5 553 aaPredicted RBP12.53□□□□□ -0.4
PRIM1-204ENST00000549549 CCDC181Q5TID7 509 aa12.53□□□□□ -0.4
PRIM1-204ENST00000549549 GDF2Q9UK05 429 aaPredicted RBP12.53□□□□□ -0.4
PRIM1-204ENST00000549549 SLFN14P0C7P3 912 aa12.52□□□□□ -0.41
PRIM1-204ENST00000549549 EPXP11678 715 aa12.52□□□□□ -0.41
PRIM1-204ENST00000549549 ZNF143P52747 638 aaPredicted RBP12.52□□□□□ -0.41
PRIM1-204ENST00000549549 GNPTABQ3T906 1256 aa12.52□□□□□ -0.41
PRIM1-204ENST00000549549 MCATQ8IVS2 390 aaKnown RBP12.52□□□□□ -0.41
PRIM1-204ENST00000549549 SLFN12Q8IYM2 578 aa12.52□□□□□ -0.41
PRIM1-204ENST00000549549 MFSD3Q96ES6 412 aa12.52□□□□□ -0.41
PRIM1-204ENST00000549549 WDR18Q9BV38 432 aa12.52□□□□□ -0.41
PRIM1-204ENST00000549549 CARD10Q9BWT7 1032 aa12.52□□□□□ -0.41
PRIM1-204ENST00000549549 KLHL3Q9UH77 587 aa12.52□□□□□ -0.41
PRIM1-204ENST00000549549 HIF3AQ9Y2N7 669 aa12.52□□□□□ -0.41
PRIM1-204ENST00000549549 LOC100289279A0A1B0GTE1 492 aa12.51□□□□□ -0.41
PRIM1-204ENST00000549549 PRAMEF27A3QJZ7 478 aa12.51□□□□□ -0.41
PRIM1-204ENST00000549549 LILRB5O75023 590 aa12.51□□□□□ -0.41
PRIM1-204ENST00000549549 ERVK-24P63145 666 aa12.51□□□□□ -0.41
PRIM1-204ENST00000549549 SETDB1Q15047 1291 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms