RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 USP17L21D6R901 530 aa11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 PRKAB2O43741 272 aa11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 PPP1R12BO60237 982 aaPredicted RBP11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 EGFRP00533 1210 aa11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 CHGBP05060 677 aa11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 HMGB1P09429 215 aaKnown RBP11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 PPARAQ07869 468 aa11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 TCP10Q12799 353 aa11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 NFIAQ12857 509 aa11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 C12orf60Q5U649 245 aa11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 CHADLQ6NUI6 762 aa11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 SMC1BQ8NDV3 1235 aa11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 KRT23Q9C075 422 aa11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 EPB41L4AQ9HCS5 686 aaPredicted RBP11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 NMRK2Q9NPI5 230 aa11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 SERPINB13Q9UIV8 391 aa11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 TRPM7Q96QT4 1865 aa11.59□□□□□ -0.55
SMARCD1-206ENST00000549274 CNTNAP1P78357 1384 aa11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 MINDY4BA8MYZ0 360 aa11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 PSMA5P28066 241 aa11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 FKBP1BP68106 108 aa11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 FSTL1Q12841 308 aa11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 TSGA10IPQ3SY00 556 aa11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 CCDC178Q5BJE1 867 aa11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 VPS53Q5VIR6 699 aa11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 CTR9Q6PD62 1173 aa11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 RALYLQ86SE5 291 aaKnown RBP11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 METTL16Q86W50 562 aaKnown RBP11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 IFNLR1Q8IU57 520 aaPredicted RBP11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 RBM46Q8TBY0 533 aaKnown RBP11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 STAG1Q8WVM7 1258 aa11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 CCDC17Q96LX7 622 aa11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 USP26Q9BXU7 913 aa11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 MKNK2Q9HBH9 465 aa11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 DDX4Q9NQI0 724 aaKnown RBP11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 PCDHAC2Q9Y5I4 1007 aa11.58□□□□□ -0.56
SMARCD1-206ENST00000549274 ABCB7O75027 752 aa11.57□□□□□ -0.56
SMARCD1-206ENST00000549274 TOMM70O94826 608 aa11.57□□□□□ -0.56
SMARCD1-206ENST00000549274 HSPA4P34932 840 aa11.57□□□□□ -0.56
SMARCD1-206ENST00000549274 CACNB3P54284 484 aa11.57□□□□□ -0.56
SMARCD1-206ENST00000549274 PTH1RQ03431 593 aa11.57□□□□□ -0.56
SMARCD1-206ENST00000549274 NECTIN1Q15223 517 aa11.57□□□□□ -0.56
SMARCD1-206ENST00000549274 AKNAD1Q5T1N1 836 aa11.57□□□□□ -0.56
SMARCD1-206ENST00000549274 CREB3L3Q68CJ9 461 aa11.57□□□□□ -0.56
SMARCD1-206ENST00000549274 MFSD6Q6ZSS7 791 aa11.57□□□□□ -0.56
SMARCD1-206ENST00000549274 C16orf86Q6ZW13 317 aa11.57□□□□□ -0.56
SMARCD1-206ENST00000549274 ARMC9Q7Z3E5 817 aa11.57□□□□□ -0.56
SMARCD1-206ENST00000549274 MTA3Q9BTC8 594 aa11.57□□□□□ -0.56
SMARCD1-206ENST00000549274 ZNF341Q9BYN7 854 aa11.57□□□□□ -0.56
SMARCD1-206ENST00000549274 TBC1D2Q9BYX2 928 aa11.57□□□□□ -0.56
SMARCD1-206ENST00000549274 SAP30BPQ9UHR5 308 aaKnown RBP11.57□□□□□ -0.56
SMARCD1-206ENST00000549274 PALD1Q9ULE6 856 aa11.57□□□□□ -0.56
SMARCD1-206ENST00000549274 SLC27A2O14975 620 aa11.56□□□□□ -0.56
SMARCD1-206ENST00000549274 ORC4O43929 436 aa11.56□□□□□ -0.56
SMARCD1-206ENST00000549274 MAP3K10Q02779 954 aa11.56□□□□□ -0.56
SMARCD1-206ENST00000549274 SART3Q15020 963 aaKnown RBP11.56□□□□□ -0.56
SMARCD1-206ENST00000549274 ZNF444Q8N0Y2 327 aaPredicted RBP11.56□□□□□ -0.56
SMARCD1-206ENST00000549274 NCOA7Q8NI08 942 aa11.56□□□□□ -0.56
SMARCD1-206ENST00000549274 ESR2Q92731 530 aa11.56□□□□□ -0.56
SMARCD1-206ENST00000549274 TMEM39BQ9GZU3 492 aa11.56□□□□□ -0.56
SMARCD1-206ENST00000549274 IL25Q9H293 177 aa11.56□□□□□ -0.56
SMARCD1-206ENST00000549274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.56□□□□□ -0.56
SMARCD1-206ENST00000549274 PAPPA2Q9BXP8 1791 aa11.55□□□□□ -0.56
SMARCD1-206ENST00000549274 DDTLA6NHG4 134 aaPredicted RBP11.55□□□□□ -0.56
SMARCD1-206ENST00000549274 FOXP2O15409 715 aa11.55□□□□□ -0.56
SMARCD1-206ENST00000549274 IREB2P48200 963 aaKnown RBP11.55□□□□□ -0.56
SMARCD1-206ENST00000549274 RBM25P49756 843 aaKnown RBP11.55□□□□□ -0.56
SMARCD1-206ENST00000549274 GABPAQ06546 454 aa11.55□□□□□ -0.56
SMARCD1-206ENST00000549274 USP48Q86UV5 1035 aa11.55□□□□□ -0.56
SMARCD1-206ENST00000549274 IQCA1Q86XH1 822 aa11.55□□□□□ -0.56
SMARCD1-206ENST00000549274 ZNF784Q8NCA9 323 aaPredicted RBP11.55□□□□□ -0.56
SMARCD1-206ENST00000549274 KCNB2Q92953 911 aa11.55□□□□□ -0.56
SMARCD1-206ENST00000549274 CDCA5Q96FF9 252 aa11.55□□□□□ -0.56
SMARCD1-206ENST00000549274 TEPSINQ96N21 525 aa11.55□□□□□ -0.56
SMARCD1-206ENST00000549274 C22orf23Q9BZE7 217 aa11.55□□□□□ -0.56
SMARCD1-206ENST00000549274 TM6SF1Q9BZW5 370 aa11.55□□□□□ -0.56
SMARCD1-206ENST00000549274 CABP5Q9NP86 173 aa11.55□□□□□ -0.56
SMARCD1-206ENST00000549274 WDR19Q8NEZ3 1342 aa11.55□□□□□ -0.56
SMARCD1-206ENST00000549274 ERICH2A1L162 156 aa11.54□□□□□ -0.56
SMARCD1-206ENST00000549274 KIF3CO14782 793 aa11.54□□□□□ -0.56
SMARCD1-206ENST00000549274 ASNSP08243 561 aa11.54□□□□□ -0.56
SMARCD1-206ENST00000549274 CYP21A2P08686 494 aa11.54□□□□□ -0.56
SMARCD1-206ENST00000549274 FGRP09769 529 aa11.54□□□□□ -0.56
SMARCD1-206ENST00000549274 CDK8P49336 464 aa11.54□□□□□ -0.56
SMARCD1-206ENST00000549274 PLCD1P51178 756 aa11.54□□□□□ -0.56
SMARCD1-206ENST00000549274 C2orf69Q8N8R5 385 aa11.54□□□□□ -0.56
SMARCD1-206ENST00000549274 GLIS2Q9BZE0 524 aaPredicted RBP11.54□□□□□ -0.56
SMARCD1-206ENST00000549274 TOMM22Q9NS69 142 aa11.54□□□□□ -0.56
SMARCD1-206ENST00000549274 ASTN2O75129 1339 aaPredicted RBP11.54□□□□□ -0.56
SMARCD1-206ENST00000549274 SIPA1L1O43166 1804 aa11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 TSPY2A6NKD2 308 aa11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 ADM5C9JUS6 153 aa11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 E7EWF7 191 aa11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 CTNND1O60716 968 aaKnown RBP11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 MCM5P33992 734 aa11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 HAND2P61296 217 aa11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 CERKLQ49MI3 558 aaPredicted RBP11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 NBPF12Q5TAG4 269 aaPredicted RBP11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 MAP1SQ66K74 1059 aaPredicted RBP11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 TATDN1Q6P1N9 297 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms