RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 FMR1Q06787 632 aaKnown RBP eCLIP7.83□□□□□ -1.16
CNOT2-216ENST00000548939 ALG1LQ6GMV1 187 aa7.83□□□□□ -1.16
CNOT2-216ENST00000548939 CDC37L1Q7L3B6 337 aa7.83□□□□□ -1.16
CNOT2-216ENST00000548939 UBE3DQ7Z6J8 389 aa7.83□□□□□ -1.16
CNOT2-216ENST00000548939 SETDB2Q96T68 719 aa7.83□□□□□ -1.16
CNOT2-216ENST00000548939 PCDHA4Q9UN74 947 aa7.83□□□□□ -1.16
CNOT2-216ENST00000548939 RING1Q06587 406 aa7.82□□□□□ -1.16
CNOT2-216ENST00000548939 ZNF648Q5T619 568 aaPredicted RBP7.82□□□□□ -1.16
CNOT2-216ENST00000548939 ZBTB37Q5TC79 503 aa7.82□□□□□ -1.16
CNOT2-216ENST00000548939 SLC23A3Q6PIS1 610 aa7.82□□□□□ -1.16
CNOT2-216ENST00000548939 ATP2B2Q01814 1243 aa7.81□□□□□ -1.16
CNOT2-216ENST00000548939 IKZF1Q13422 519 aa7.81□□□□□ -1.16
CNOT2-216ENST00000548939 RASIP1Q5U651 963 aa7.81□□□□□ -1.16
CNOT2-216ENST00000548939 SCARA3Q6AZY7 606 aa7.81□□□□□ -1.16
CNOT2-216ENST00000548939 KCT2Q8NC54 265 aa7.81□□□□□ -1.16
CNOT2-216ENST00000548939 ASB11Q8WXH4 323 aa7.81□□□□□ -1.16
CNOT2-216ENST00000548939 ELMO3Q96BJ8 720 aa7.81□□□□□ -1.16
CNOT2-216ENST00000548939 WWC3Q9ULE0 1092 aa7.81□□□□□ -1.16
CNOT2-216ENST00000548939 SPG7Q9UQ90 795 aa7.81□□□□□ -1.16
CNOT2-216ENST00000548939 GNAT3A8MTJ3 354 aa7.8□□□□□ -1.16
CNOT2-216ENST00000548939 SPACA3Q8IXA5 215 aa7.8□□□□□ -1.16
CNOT2-216ENST00000548939 ANKRD24Q8TF21 1146 aa7.8□□□□□ -1.16
CNOT2-216ENST00000548939 TMEM40Q8WWA1 233 aa7.8□□□□□ -1.16
CNOT2-216ENST00000548939 ASB16Q96NS5 453 aa7.8□□□□□ -1.16
CNOT2-216ENST00000548939 CYP8B1Q9UNU6 501 aa7.8□□□□□ -1.16
CNOT2-216ENST00000548939 FARP2O94887 1054 aaPredicted RBP7.79□□□□□ -1.16
CNOT2-216ENST00000548939 CELA3AP09093 270 aa7.79□□□□□ -1.16
CNOT2-216ENST00000548939 PCNX4Q63HM2 1172 aa7.79□□□□□ -1.16
CNOT2-216ENST00000548939 ARMCX6Q7L4S7 300 aa7.79□□□□□ -1.16
CNOT2-216ENST00000548939 ZNF507Q8TCN5 953 aa7.79□□□□□ -1.16
CNOT2-216ENST00000548939 PRDM7Q9NQW5 492 aa7.79□□□□□ -1.16
CNOT2-216ENST00000548939 EOMESO95936 686 aa7.78□□□□□ -1.16
CNOT2-216ENST00000548939 ZP2Q05996 745 aa7.78□□□□□ -1.16
CNOT2-216ENST00000548939 NKPD1Q17RQ9 610 aa7.78□□□□□ -1.16
CNOT2-216ENST00000548939 C12orf49Q9H741 205 aa7.78□□□□□ -1.16
CNOT2-216ENST00000548939 PRDM5Q9NQX1 630 aaPredicted RBP7.78□□□□□ -1.16
CNOT2-216ENST00000548939 FAM8A1Q9UBU6 413 aa7.78□□□□□ -1.16
CNOT2-216ENST00000548939 IVNS1ABPQ9Y6Y0 642 aa7.78□□□□□ -1.16
CNOT2-216ENST00000548939 PRAMEF27A3QJZ7 478 aa7.77□□□□□ -1.17
CNOT2-216ENST00000548939 LRIG2O94898 1065 aa7.77□□□□□ -1.17
CNOT2-216ENST00000548939 USP17L7P0C7H9 530 aa7.77□□□□□ -1.17
CNOT2-216ENST00000548939 CLCN7P51798 805 aa7.77□□□□□ -1.17
CNOT2-216ENST00000548939 LRFN4Q6PJG9 635 aa7.77□□□□□ -1.17
CNOT2-216ENST00000548939 FLAD1Q8NFF5 587 aa7.77□□□□□ -1.17
CNOT2-216ENST00000548939 FOXQ1Q9C009 403 aa7.77□□□□□ -1.17
CNOT2-216ENST00000548939 MAPK8IP1Q9UQF2 711 aa7.77□□□□□ -1.17
CNOT2-216ENST00000548939 INPP5AQ14642 412 aa7.76□□□□□ -1.17
CNOT2-216ENST00000548939 ZNF124Q15973 351 aa7.76□□□□□ -1.17
CNOT2-216ENST00000548939 HDXQ7Z353 690 aa7.76□□□□□ -1.17
CNOT2-216ENST00000548939 PITPNM2Q9BZ72 1349 aa7.76□□□□□ -1.17
CNOT2-216ENST00000548939 PTPN11Q06124 597 aaPredicted RBP7.75□□□□□ -1.17
CNOT2-216ENST00000548939 PKN1Q16512 942 aa7.75□□□□□ -1.17
CNOT2-216ENST00000548939 ZSWIM9Q86XI8 627 aa7.75□□□□□ -1.17
CNOT2-216ENST00000548939 KSR1Q8IVT5 923 aa7.75□□□□□ -1.17
CNOT2-216ENST00000548939 PLPPR2Q96GM1 343 aa7.75□□□□□ -1.17
CNOT2-216ENST00000548939 TPX2Q9ULW0 747 aaKnown RBP7.75□□□□□ -1.17
CNOT2-216ENST00000548939 TTF2Q9UNY4 1162 aaKnown RBP7.75□□□□□ -1.17
CNOT2-216ENST00000548939 FAM155AB1AL88 458 aaPredicted RBP7.74□□□□□ -1.17
CNOT2-216ENST00000548939 SLITRK5O94991 958 aa7.74□□□□□ -1.17
CNOT2-216ENST00000548939 SV2BQ7L1I2 683 aa7.74□□□□□ -1.17
CNOT2-216ENST00000548939 CYFIP1Q7L576 1253 aa7.74□□□□□ -1.17
CNOT2-216ENST00000548939 FBRSQ9HAH7 460 aa7.74□□□□□ -1.17
CNOT2-216ENST00000548939 LDHBP07195 334 aaKnown RBP7.73□□□□□ -1.17
CNOT2-216ENST00000548939 P4HBP07237 508 aaKnown RBP7.73□□□□□ -1.17
CNOT2-216ENST00000548939 KCNA1Q09470 495 aa7.73□□□□□ -1.17
CNOT2-216ENST00000548939 KCNMB1Q16558 191 aa7.73□□□□□ -1.17
CNOT2-216ENST00000548939 FRMD6Q96NE9 622 aa7.73□□□□□ -1.17
CNOT2-216ENST00000548939 MIPEPQ99797 713 aa7.73□□□□□ -1.17
CNOT2-216ENST00000548939 WNT10AQ9GZT5 417 aa7.73□□□□□ -1.17
CNOT2-216ENST00000548939 LMCD1Q9NZU5 365 aa7.73□□□□□ -1.17
CNOT2-216ENST00000548939 CTNND2Q9UQB3 1225 aa7.73□□□□□ -1.17
CNOT2-216ENST00000548939 DBX1A6NMT0 343 aa7.72□□□□□ -1.17
CNOT2-216ENST00000548939 ETF1P62495 437 aaKnown RBP7.72□□□□□ -1.17
CNOT2-216ENST00000548939 SLBPQ14493 270 aaKnown RBP eCLIP7.72□□□□□ -1.17
CNOT2-216ENST00000548939 SFRP5Q5T4F7 317 aa7.72□□□□□ -1.17
CNOT2-216ENST00000548939 TTBK2Q6IQ55 1244 aa7.72□□□□□ -1.17
CNOT2-216ENST00000548939 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.72□□□□□ -1.17
CNOT2-216ENST00000548939 MFSD2AQ8NA29 543 aa7.72□□□□□ -1.17
CNOT2-216ENST00000548939 GAL3ST3Q96A11 431 aa7.72□□□□□ -1.17
CNOT2-216ENST00000548939 HSPA12BQ96MM6 686 aa7.72□□□□□ -1.17
CNOT2-216ENST00000548939 SLC38A3Q99624 504 aa7.72□□□□□ -1.17
CNOT2-216ENST00000548939 FAM53CQ9NYF3 392 aa7.72□□□□□ -1.17
CNOT2-216ENST00000548939 SNCAIPQ9Y6H5 919 aa7.72□□□□□ -1.17
CNOT2-216ENST00000548939 LRRC10BA6NIK2 292 aa7.71□□□□□ -1.18
CNOT2-216ENST00000548939 PRR33A8MZF0 331 aa7.71□□□□□ -1.18
CNOT2-216ENST00000548939 CAP2P40123 477 aa7.71□□□□□ -1.18
CNOT2-216ENST00000548939 AFMP43652 599 aa7.71□□□□□ -1.18
CNOT2-216ENST00000548939 NKG7Q16617 165 aa7.71□□□□□ -1.18
CNOT2-216ENST00000548939 WIPI1Q5MNZ9 446 aaPredicted RBP7.71□□□□□ -1.18
CNOT2-216ENST00000548939 CDKAL1Q5VV42 579 aa7.71□□□□□ -1.18
CNOT2-216ENST00000548939 HID1Q8IV36 788 aa7.71□□□□□ -1.18
CNOT2-216ENST00000548939 MFSD4AQ8N468 514 aa7.71□□□□□ -1.18
CNOT2-216ENST00000548939 CARS2Q9HA77 564 aaKnown RBP7.71□□□□□ -1.18
CNOT2-216ENST00000548939 ATP13A1Q9HD20 1204 aa7.71□□□□□ -1.18
CNOT2-216ENST00000548939 ARID1BQ8NFD5 2236 aaPredicted RBP7.71□□□□□ -1.18
CNOT2-216ENST00000548939 ZNF865P0CJ78 1059 aaPredicted RBP7.7□□□□□ -1.18
CNOT2-216ENST00000548939 LMNB1P20700 586 aa7.7□□□□□ -1.18
CNOT2-216ENST00000548939 EIF4BP23588 611 aaKnown RBP7.7□□□□□ -1.18
CNOT2-216ENST00000548939 CDK8P49336 464 aa7.7□□□□□ -1.18
CNOT2-216ENST00000548939 FGD1P98174 961 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms