RNA–Protein interactions for RNA: ENST00000548897.1

TTC41P-204, Transcript of tetratricopeptide repeat domain 41, pseudogene, humanhuman

TSL 5 BASIC

Gene TTC41P, Length 2,998 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41P-204ENST00000548897 FAM47AQ5JRC9 791 aa9.23□□□□□ -0.93
TTC41P-204ENST00000548897 DIS3L2Q8IYB7 885 aaKnown RBP9.23□□□□□ -0.93
TTC41P-204ENST00000548897 CEP57L1Q8IYX8 460 aa9.23□□□□□ -0.93
TTC41P-204ENST00000548897 ZNF654Q8IZM8 581 aa9.23□□□□□ -0.93
TTC41P-204ENST00000548897 SHISA4Q96DD7 197 aa9.23□□□□□ -0.93
TTC41P-204ENST00000548897 SETDB2Q96T68 719 aa9.23□□□□□ -0.93
TTC41P-204ENST00000548897 RIOK1Q9BRS2 568 aaKnown RBP9.23□□□□□ -0.93
TTC41P-204ENST00000548897 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.23□□□□□ -0.93
TTC41P-204ENST00000548897 KRT23Q9C075 422 aa9.23□□□□□ -0.93
TTC41P-204ENST00000548897 BSDC1Q9NW68 430 aaPredicted RBP9.23□□□□□ -0.93
TTC41P-204ENST00000548897 KIAA1468Q9P260 1216 aa9.23□□□□□ -0.93
TTC41P-204ENST00000548897 MTMR7Q9Y216 660 aa9.23□□□□□ -0.93
TTC41P-204ENST00000548897 LTBP4Q8N2S1 1624 aa9.23□□□□□ -0.93
TTC41P-204ENST00000548897 PNPLA7Q6ZV29 1317 aa9.23□□□□□ -0.93
TTC41P-204ENST00000548897 UBAP1LF5GYI3 381 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 CTAGE5O15320 804 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 PLEKHA8P1O95397 391 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 SLC3A2P08195 630 aaKnown RBP9.22□□□□□ -0.93
TTC41P-204ENST00000548897 SLC39A14Q15043 492 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 NOM1Q5C9Z4 860 aaKnown RBP9.22□□□□□ -0.93
TTC41P-204ENST00000548897 ATL3Q6DD88 541 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 MAP3K14Q99558 947 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 CNNM2Q9H8M5 875 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 ANO10Q9NW15 660 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 VPS54Q9P1Q0 977 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 CCNL1Q9UK58 526 aaPredicted RBP9.22□□□□□ -0.93
TTC41P-204ENST00000548897 ZNF804BA4D1E1 1349 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 A0A1W2PQ27 194 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 A0A1W2PQ64 194 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 A0A1W2PQD8 194 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 USP17L12C9JPN9 530 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 USP17L21D6R901 530 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 ZPR1O75312 459 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 FMNL1O95466 1100 aaPredicted RBP9.22□□□□□ -0.93
TTC41P-204ENST00000548897 LIFRP42702 1097 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 SYKP43405 635 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 MECOMQ03112 1051 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 SART3Q15020 963 aaKnown RBP9.22□□□□□ -0.93
TTC41P-204ENST00000548897 PTPAQ15257 358 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 GRAMD1CQ8IYS0 662 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 PDILTQ8N807 584 aa9.22□□□□□ -0.93
TTC41P-204ENST00000548897 ENAHQ8N8S7 591 aaPredicted RBP9.22□□□□□ -0.93
TTC41P-204ENST00000548897 GNL3LQ9NVN8 582 aaKnown RBP9.22□□□□□ -0.93
TTC41P-204ENST00000548897 TOB1P50616 345 aaPredicted RBP9.21□□□□□ -0.93
TTC41P-204ENST00000548897 RPS8P62241 208 aaKnown RBP9.21□□□□□ -0.93
TTC41P-204ENST00000548897 PCDHB6Q9Y5E3 794 aa9.21□□□□□ -0.93
TTC41P-204ENST00000548897 RTL9Q8NET4 1388 aa9.21□□□□□ -0.93
TTC41P-204ENST00000548897 SMC2O95347 1197 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 GNAT2P19087 354 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 LMOD1P29536 600 aaPredicted RBP9.21□□□□□ -0.94
TTC41P-204ENST00000548897 DSG3P32926 999 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 HSP90AA2PQ14568 343 aaPredicted RBP9.21□□□□□ -0.94
TTC41P-204ENST00000548897 SF3B3Q15393 1217 aaKnown RBP9.21□□□□□ -0.94
TTC41P-204ENST00000548897 CLEC4GQ6UXB4 293 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 NBPF11Q86T75 865 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 NOSTRINQ8IVI9 506 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 FANCBQ8NB91 859 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 ARHGEF1Q92888 912 aaKnown RBP9.21□□□□□ -0.94
TTC41P-204ENST00000548897 COL5A3P25940 1745 aaPredicted RBP9.21□□□□□ -0.94
TTC41P-204ENST00000548897 USP27XA6NNY8 438 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 WNT7AO00755 349 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 MMP1P03956 469 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 ATP1A3P13637 1013 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 IFNAR1P17181 557 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 UBE4AQ14139 1066 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 NFIXQ14938 502 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 ZNF827Q17R98 1081 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 LONRF3Q496Y0 759 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 EARS2Q5JPH6 523 aaKnown RBP9.21□□□□□ -0.94
TTC41P-204ENST00000548897 CTR9Q6PD62 1173 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 USP49Q70CQ1 688 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 TRIM22Q8IYM9 498 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 CRACR2BQ8N4Y2 399 aaPredicted RBP9.21□□□□□ -0.94
TTC41P-204ENST00000548897 NLRP3Q96P20 1036 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 SPTLC3Q9NUV7 552 aa9.21□□□□□ -0.94
TTC41P-204ENST00000548897 RREB1Q92766 1687 aa9.2□□□□□ -0.94
TTC41P-204ENST00000548897 MYH2Q9UKX2 1941 aa9.2□□□□□ -0.94
TTC41P-204ENST00000548897 CASZ1Q86V15 1759 aa9.2□□□□□ -0.94
TTC41P-204ENST00000548897 VEGFAP15692 232 aaPredicted RBP9.2□□□□□ -0.94
TTC41P-204ENST00000548897 CMA1P23946 247 aa9.2□□□□□ -0.94
TTC41P-204ENST00000548897 U2AF2P26368 475 aaKnown RBP eCLIP9.2□□□□□ -0.94
TTC41P-204ENST00000548897 GRIK5Q16478 980 aa9.2□□□□□ -0.94
TTC41P-204ENST00000548897 ESR2Q92731 530 aa9.2□□□□□ -0.94
TTC41P-204ENST00000548897 NSUN4Q96CB9 384 aaKnown RBP9.2□□□□□ -0.94
TTC41P-204ENST00000548897 CABP5Q9NP86 173 aa9.2□□□□□ -0.94
TTC41P-204ENST00000548897 CACNA1SQ13698 1873 aa9.2□□□□□ -0.94
TTC41P-204ENST00000548897 BCORQ6W2J9 1755 aa9.2□□□□□ -0.94
TTC41P-204ENST00000548897 DIXDC1Q155Q3 683 aa9.2□□□□□ -0.94
TTC41P-204ENST00000548897 ZSCAN10Q96SZ4 725 aaPredicted RBP9.2□□□□□ -0.94
TTC41P-204ENST00000548897 TRMT1Q9NXH9 659 aaKnown RBP9.2□□□□□ -0.94
TTC41P-204ENST00000548897 IFNKQ9P0W0 207 aa9.2□□□□□ -0.94
TTC41P-204ENST00000548897 ANKIB1Q9P2G1 1089 aa9.2□□□□□ -0.94
TTC41P-204ENST00000548897 NARFQ9UHQ1 456 aa9.2□□□□□ -0.94
TTC41P-204ENST00000548897 USP21Q9UK80 565 aa9.2□□□□□ -0.94
TTC41P-204ENST00000548897 TIAM2Q8IVF5 1701 aa9.2□□□□□ -0.94
TTC41P-204ENST00000548897 ADAMTS3O15072 1205 aa9.19□□□□□ -0.94
TTC41P-204ENST00000548897 TOM1O60784 492 aa9.19□□□□□ -0.94
TTC41P-204ENST00000548897 USP17L8P0C7I0 530 aa9.19□□□□□ -0.94
TTC41P-204ENST00000548897 PRR29P0C7W0 189 aa9.19□□□□□ -0.94
TTC41P-204ENST00000548897 HIBADHP31937 336 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms