RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 TFCP2Q12800 502 aa20.65■□□□□ 0.9
CPSF7-225ENST00000545934 MVPQ14764 893 aaKnown RBP20.65■□□□□ 0.9
CPSF7-225ENST00000545934 FAM110CQ1W6H9 321 aa20.65■□□□□ 0.9
CPSF7-225ENST00000545934 ERICH6Q7L0X2 663 aa20.65■□□□□ 0.9
CPSF7-225ENST00000545934 ANKRD13CQ8N6S4 541 aa20.65■□□□□ 0.9
CPSF7-225ENST00000545934 OSBPL5Q9H0X9 879 aaPredicted RBP20.65■□□□□ 0.9
CPSF7-225ENST00000545934 HMG20BQ9P0W2 317 aa20.65■□□□□ 0.9
CPSF7-225ENST00000545934 AKAP2Q9Y2D5 859 aa20.65■□□□□ 0.9
CPSF7-225ENST00000545934 A0A1W2PPC1 479 aa20.64■□□□□ 0.89
CPSF7-225ENST00000545934 FAM196BA6NMK8 535 aa20.64■□□□□ 0.89
CPSF7-225ENST00000545934 NSUN4Q96CB9 384 aaKnown RBP20.64■□□□□ 0.89
CPSF7-225ENST00000545934 DEFB118Q96PH6 123 aa20.64■□□□□ 0.89
CPSF7-225ENST00000545934 PNMA3Q9UL41 463 aa20.64■□□□□ 0.89
CPSF7-225ENST00000545934 FRMPD3Q5JV73 1810 aa20.63■□□□□ 0.89
CPSF7-225ENST00000545934 SRGAP3O43295 1099 aa20.63■□□□□ 0.89
CPSF7-225ENST00000545934 RRP1BQ14684 758 aaKnown RBP20.63■□□□□ 0.89
CPSF7-225ENST00000545934 COA7Q96BR5 231 aa20.63■□□□□ 0.89
CPSF7-225ENST00000545934 TBC1D2Q9BYX2 928 aa20.63■□□□□ 0.89
CPSF7-225ENST00000545934 ZNF280CQ8ND82 737 aa20.62■□□□□ 0.89
CPSF7-225ENST00000545934 ARHGAP45Q92619 1136 aa20.62■□□□□ 0.89
CPSF7-225ENST00000545934 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.62■□□□□ 0.89
CPSF7-225ENST00000545934 MYH1P12882 1939 aa20.61■□□□□ 0.89
CPSF7-225ENST00000545934 TFRCP02786 760 aaKnown RBP20.61■□□□□ 0.89
CPSF7-225ENST00000545934 LDHCP07864 332 aa20.61■□□□□ 0.89
CPSF7-225ENST00000545934 GNAI3P08754 354 aa20.61■□□□□ 0.89
CPSF7-225ENST00000545934 ARID4AP29374 1257 aaPredicted RBP20.61■□□□□ 0.89
CPSF7-225ENST00000545934 CAP2P40123 477 aa20.61■□□□□ 0.89
CPSF7-225ENST00000545934 GCLCP48506 637 aaPredicted RBP20.61■□□□□ 0.89
CPSF7-225ENST00000545934 SPP2Q13103 211 aa20.61■□□□□ 0.89
CPSF7-225ENST00000545934 SH3D19Q5HYK7 790 aa20.61■□□□□ 0.89
CPSF7-225ENST00000545934 PI16Q6UXB8 463 aa20.61■□□□□ 0.89
CPSF7-225ENST00000545934 SPATA5Q8NB90 893 aa20.61■□□□□ 0.89
CPSF7-225ENST00000545934 GJD2Q9UKL4 321 aa20.61■□□□□ 0.89
CPSF7-225ENST00000545934 EVI5O60447 810 aa20.6■□□□□ 0.89
CPSF7-225ENST00000545934 RARSP54136 660 aaKnown RBP20.6■□□□□ 0.89
CPSF7-225ENST00000545934 GSTO1P78417 241 aa20.6■□□□□ 0.89
CPSF7-225ENST00000545934 TBC1D9Q6ZT07 1266 aa20.6■□□□□ 0.89
CPSF7-225ENST00000545934 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.6■□□□□ 0.893e-8■■■□□ 15.8
CPSF7-225ENST00000545934 LAMA3Q16787 3333 aa20.59■□□□□ 0.89
CPSF7-225ENST00000545934 ANKLE1Q8NAG6 615 aa20.59■□□□□ 0.89
CPSF7-225ENST00000545934 PAWRQ96IZ0 340 aaKnown RBP20.59■□□□□ 0.89
CPSF7-225ENST00000545934 NEUROD6Q96NK8 337 aa20.59■□□□□ 0.89
CPSF7-225ENST00000545934 USP17L5A8MUK1 530 aa20.58■□□□□ 0.89
CPSF7-225ENST00000545934 MCAMP43121 646 aa20.58■□□□□ 0.89
CPSF7-225ENST00000545934 HMGCS2P54868 508 aa20.58■□□□□ 0.89
CPSF7-225ENST00000545934 PABPC4Q13310 644 aaKnown RBP eCLIP20.58■□□□□ 0.89
CPSF7-225ENST00000545934 ASCC2Q9H1I8 757 aaPredicted RBP20.58■□□□□ 0.89
CPSF7-225ENST00000545934 MORF4L1Q9UBU8 362 aa20.58■□□□□ 0.89
CPSF7-225ENST00000545934 HERC5Q9UII4 1024 aaKnown RBP20.58■□□□□ 0.89
CPSF7-225ENST00000545934 HMGCRP04035 888 aa20.57■□□□□ 0.88
CPSF7-225ENST00000545934 MNX1P50219 401 aaPredicted RBP20.57■□□□□ 0.88
CPSF7-225ENST00000545934 DIS3LQ8TF46 1054 aaKnown RBP20.57■□□□□ 0.88
CPSF7-225ENST00000545934 WDR18Q9BV38 432 aa20.57■□□□□ 0.88
CPSF7-225ENST00000545934 TAOK2Q9UL54 1235 aa20.57■□□□□ 0.88
CPSF7-225ENST00000545934 SOX1O00570 391 aaPredicted RBP20.56■□□□□ 0.88
CPSF7-225ENST00000545934 NECAB2Q7Z6G3 386 aa20.56■□□□□ 0.88
CPSF7-225ENST00000545934 TEX11Q8IYF3 940 aa20.56■□□□□ 0.88
CPSF7-225ENST00000545934 SH3RF3Q8TEJ3 882 aaPredicted RBP20.56■□□□□ 0.88
CPSF7-225ENST00000545934 AS3MTQ9HBK9 375 aa20.56■□□□□ 0.88
CPSF7-225ENST00000545934 RAI14Q9P0K7 980 aa20.56■□□□□ 0.88
CPSF7-225ENST00000545934 COL6A3P12111 3177 aa20.56■□□□□ 0.88
CPSF7-225ENST00000545934 RPTORQ8N122 1335 aa20.55■□□□□ 0.88
CPSF7-225ENST00000545934 PNMA6EA0A0J9YXQ4 647 aa20.55■□□□□ 0.88
CPSF7-225ENST00000545934 HOXA7P31268 230 aaPredicted RBP20.55■□□□□ 0.88
CPSF7-225ENST00000545934 TRIM32Q13049 653 aa20.55■□□□□ 0.88
CPSF7-225ENST00000545934 METTL16Q86W50 562 aaKnown RBP20.55■□□□□ 0.88
CPSF7-225ENST00000545934 PI4KBQ9UBF8 816 aa20.55■□□□□ 0.88
CPSF7-225ENST00000545934 STAP2Q9UGK3 403 aa20.55■□□□□ 0.88
CPSF7-225ENST00000545934 UQCRFS1P1P0C7P4 283 aa20.54■□□□□ 0.88
CPSF7-225ENST00000545934 BMP8BP34820 402 aa20.54■□□□□ 0.88
CPSF7-225ENST00000545934 JAG1P78504 1218 aa20.54■□□□□ 0.88
CPSF7-225ENST00000545934 GORABQ5T7V8 394 aa20.54■□□□□ 0.88
CPSF7-225ENST00000545934 MAP3K21Q5TCX8 1036 aa20.54■□□□□ 0.88
CPSF7-225ENST00000545934 GDF15Q99988 308 aa20.54■□□□□ 0.88
CPSF7-225ENST00000545934 DHX36Q9H2U1 1008 aaKnown RBP20.54■□□□□ 0.88
CPSF7-225ENST00000545934 DNAJC18Q9H819 358 aa20.54■□□□□ 0.88
CPSF7-225ENST00000545934 BACE1P56817 501 aa20.53■□□□□ 0.88
CPSF7-225ENST00000545934 PPP4CP60510 307 aa20.53■□□□□ 0.88
CPSF7-225ENST00000545934 TRIB2Q92519 343 aa20.53■□□□□ 0.88
CPSF7-225ENST00000545934 HMX1Q9NP08 348 aaPredicted RBP20.53■□□□□ 0.88
CPSF7-225ENST00000545934 GNAI2P04899 355 aa20.52■□□□□ 0.88
CPSF7-225ENST00000545934 ASNSP08243 561 aa20.52■□□□□ 0.88
CPSF7-225ENST00000545934 TRIM27P14373 513 aa20.52■□□□□ 0.88
CPSF7-225ENST00000545934 MTMR2Q13614 643 aa20.52■□□□□ 0.88
CPSF7-225ENST00000545934 LRCH3Q96II8 777 aa20.52■□□□□ 0.88
CPSF7-225ENST00000545934 GPR108Q9NPR9 543 aa20.52■□□□□ 0.88
CPSF7-225ENST00000545934 LRP2BPQ9P2M1 347 aa20.52■□□□□ 0.88
CPSF7-225ENST00000545934 OGDHLQ9ULD0 1010 aa20.52■□□□□ 0.88
CPSF7-225ENST00000545934 G3BP1Q13283 466 aaKnown RBP eCLIP20.51■□□□□ 0.87
CPSF7-225ENST00000545934 ADGRA1Q86SQ6 560 aa20.51■□□□□ 0.87
CPSF7-225ENST00000545934 P2RX7Q99572 595 aaKnown RBP20.51■□□□□ 0.87
CPSF7-225ENST00000545934 NBPF3Q9H094 633 aa20.51■□□□□ 0.87
CPSF7-225ENST00000545934 TXNRD2Q9NNW7 524 aa20.51■□□□□ 0.87
CPSF7-225ENST00000545934 AATFQ9NY61 560 aaKnown RBP eCLIP20.51■□□□□ 0.87
CPSF7-225ENST00000545934 TNNQ9UQP3 1299 aa20.51■□□□□ 0.87
CPSF7-225ENST00000545934 FLT1P17948 1338 aa20.51■□□□□ 0.87
CPSF7-225ENST00000545934 C19orf81C9J6K1 198 aa20.5■□□□□ 0.87
CPSF7-225ENST00000545934 BAG3O95817 575 aa20.5■□□□□ 0.87
CPSF7-225ENST00000545934 XRCC5P13010 732 aaKnown RBP20.5■□□□□ 0.87
CPSF7-225ENST00000545934 HERVK_113P62684 666 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms