RNA–Protein interactions for RNA: ENST00000545605.1

SCNN1A-223, Transcript of sodium channel epithelial 1 alpha subunit, human

TSL 4

Gene SCNN1A, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCNN1A-223	ENST00000545605	DDX4	Q9NQI0	724 aa	Known RBP	13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	USP40	Q9NVE5	1235 aa		13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	TMOD2	Q9NZR1	351 aa		13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	SOCS7	O14512	581 aa		13.64	□□□□□ -0.23
SCNN1A-223	ENST00000545605	ENTPD3	O75355	529 aa		13.64	□□□□□ -0.23
SCNN1A-223	ENST00000545605	RBM5	P52756	815 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
SCNN1A-223	ENST00000545605	RCAN1	P53805	252 aa		13.64	□□□□□ -0.23
SCNN1A-223	ENST00000545605	PICALM	Q13492	652 aa		13.64	□□□□□ -0.23
SCNN1A-223	ENST00000545605	DLGAP5	Q15398	846 aa		13.64	□□□□□ -0.23
SCNN1A-223	ENST00000545605	SPDYE2	Q495Y8	402 aa		13.64	□□□□□ -0.23
SCNN1A-223	ENST00000545605	FKBP1C	Q5VVH2	108 aa		13.64	□□□□□ -0.23
SCNN1A-223	ENST00000545605	ARHGAP27	Q6ZUM4	889 aa		13.64	□□□□□ -0.23
SCNN1A-223	ENST00000545605	TTC6	Q86TZ1	520 aa		13.64	□□□□□ -0.23
SCNN1A-223	ENST00000545605	SGMS1	Q86VZ5	419 aa		13.64	□□□□□ -0.23
SCNN1A-223	ENST00000545605	GTF3C6	Q969F1	213 aa		13.64	□□□□□ -0.23
SCNN1A-223	ENST00000545605	TPCN1	Q9ULQ1	816 aa		13.64	□□□□□ -0.23
SCNN1A-223	ENST00000545605	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.64	□□□□□ -0.23
SCNN1A-223	ENST00000545605	POLR3D	P05423	398 aa	Predicted RBP	13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	HLA-DOA	P06340	250 aa		13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	LIFR	P42702	1097 aa		13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	GABPA	Q06546	454 aa		13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	ST3GAL1	Q11201	340 aa		13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	NFIA	Q12857	509 aa		13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	ME3	Q16798	604 aa		13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	RRP12	Q5JTH9	1297 aa	Known RBP	13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	GPC2	Q8N158	579 aa		13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	LRRC2	Q9BYS8	371 aa		13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	DHX36	Q9H2U1	1008 aa	Known RBP	13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	TOMM22	Q9NS69	142 aa		13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	SWAP70	Q9UH65	585 aa		13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	SAP30BP	Q9UHR5	308 aa	Known RBP	13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	PCDHAC2	Q9Y5I4	1007 aa		13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	OTOF	Q9HC10	1997 aa		13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	TNKS	O95271	1327 aa		13.63	□□□□□ -0.23
SCNN1A-223	ENST00000545605	GOLGA8B	A8MQT2	603 aa		13.62	□□□□□ -0.23
SCNN1A-223	ENST00000545605	SMIM22	K7EJ46	135 aa		13.62	□□□□□ -0.23
SCNN1A-223	ENST00000545605	GMPS	P49915	693 aa	Predicted RBP	13.62	□□□□□ -0.23
SCNN1A-223	ENST00000545605	PLCD1	P51178	756 aa		13.62	□□□□□ -0.23
SCNN1A-223	ENST00000545605	EVX2	Q03828	476 aa		13.62	□□□□□ -0.23
SCNN1A-223	ENST00000545605	TMEM67	Q5HYA8	995 aa		13.62	□□□□□ -0.23
SCNN1A-223	ENST00000545605	IQCA1	Q86XH1	822 aa		13.62	□□□□□ -0.23
SCNN1A-223	ENST00000545605	NKX2-3	Q8TAU0	364 aa		13.62	□□□□□ -0.23
SCNN1A-223	ENST00000545605	CHMP4C	Q96CF2	233 aa		13.62	□□□□□ -0.23
SCNN1A-223	ENST00000545605	ZNF274	Q96GC6	653 aa	Predicted RBP	13.62	□□□□□ -0.23
SCNN1A-223	ENST00000545605	UBAC1	Q9BSL1	405 aa		13.62	□□□□□ -0.23
SCNN1A-223	ENST00000545605	SLK	Q9H2G2	1235 aa	Predicted RBP	13.62	□□□□□ -0.23
SCNN1A-223	ENST00000545605	LY9	Q9HBG7	655 aa		13.62	□□□□□ -0.23
SCNN1A-223	ENST00000545605	MYOZ2	Q9NPC6	264 aa		13.62	□□□□□ -0.23
SCNN1A-223	ENST00000545605	FAM198A	Q9UFP1	575 aa		13.62	□□□□□ -0.23
SCNN1A-223	ENST00000545605	CNTNAP1	P78357	1384 aa		13.61	□□□□□ -0.23
SCNN1A-223	ENST00000545605	ERICH2	A1L162	156 aa		13.61	□□□□□ -0.23
SCNN1A-223	ENST00000545605	MYO1B	O43795	1136 aa		13.61	□□□□□ -0.23
SCNN1A-223	ENST00000545605	PFKFB2	O60825	505 aa		13.61	□□□□□ -0.23
SCNN1A-223	ENST00000545605	APOBR	Q0VD83	1088 aa		13.61	□□□□□ -0.23
SCNN1A-223	ENST00000545605	APOA5	Q6Q788	366 aa		13.61	□□□□□ -0.23
SCNN1A-223	ENST00000545605	CHST3	Q7LGC8	479 aa		13.61	□□□□□ -0.23
SCNN1A-223	ENST00000545605	CCDC83	Q8IWF9	413 aa		13.61	□□□□□ -0.23
SCNN1A-223	ENST00000545605	PRMT6	Q96LA8	375 aa	Predicted RBP	13.61	□□□□□ -0.23
SCNN1A-223	ENST00000545605	TDRD3	Q9H7E2	651 aa	Known RBP	13.61	□□□□□ -0.23
SCNN1A-223	ENST00000545605	CWC22	Q9HCG8	908 aa	Known RBP	13.61	□□□□□ -0.23
SCNN1A-223	ENST00000545605	RNF181	Q9P0P0	153 aa		13.61	□□□□□ -0.23
SCNN1A-223	ENST00000545605	ZSWIM5	Q9P217	1185 aa		13.61	□□□□□ -0.23
SCNN1A-223	ENST00000545605	SERPINB13	Q9UIV8	391 aa		13.61	□□□□□ -0.23
SCNN1A-223	ENST00000545605	KLF18	A0A0U1RQI7	1052 aa		13.6	□□□□□ -0.23
SCNN1A-223	ENST00000545605	TSPY2	A6NKD2	308 aa		13.6	□□□□□ -0.23
SCNN1A-223	ENST00000545605	IFIT3	O14879	490 aa	Known RBP	13.6	□□□□□ -0.23
SCNN1A-223	ENST00000545605	RASA1	P20936	1047 aa		13.6	□□□□□ -0.23
SCNN1A-223	ENST00000545605	WTAP	Q15007	396 aa		13.6	□□□□□ -0.23
SCNN1A-223	ENST00000545605	SEC23A	Q15436	765 aa		13.6	□□□□□ -0.23
SCNN1A-223	ENST00000545605	SLC4A8	Q2Y0W8	1093 aa		13.6	□□□□□ -0.23
SCNN1A-223	ENST00000545605	CCDC178	Q5BJE1	867 aa		13.6	□□□□□ -0.23
SCNN1A-223	ENST00000545605	FAM83A	Q86UY5	434 aa		13.6	□□□□□ -0.23
SCNN1A-223	ENST00000545605	MICALL2	Q8IY33	904 aa		13.6	□□□□□ -0.23
SCNN1A-223	ENST00000545605	IGDCC4	Q8TDY8	1250 aa		13.6	□□□□□ -0.23
SCNN1A-223	ENST00000545605	CHMP5	Q9NZZ3	219 aa		13.6	□□□□□ -0.23
SCNN1A-223	ENST00000545605	ZNF70	Q9UC06	446 aa	Predicted RBP	13.6	□□□□□ -0.23
SCNN1A-223	ENST00000545605	WNT10B	O00744	389 aa		13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	RANBP6	O60518	1105 aa	Known RBP	13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	PRDM1	O75626	825 aa		13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	CDK8	P49336	464 aa		13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	CACNB3	P54284	484 aa		13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	TNFAIP1	Q13829	316 aa		13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	KIF4B	Q2VIQ3	1234 aa		13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	TMTC2	Q8N394	836 aa		13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	ENAH	Q8N8S7	591 aa	Predicted RBP	13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	SLC44A5	Q8NCS7	719 aa		13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	DYNLL2	Q96FJ2	89 aa		13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	LLPH	Q9BRT6	129 aa	Known RBP	13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	MKNK2	Q9HBH9	465 aa		13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	INCENP	Q9NQS7	918 aa		13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	TCP11L1	Q9NUJ3	509 aa		13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	GPRC5D	Q9NZD1	345 aa		13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	GJA3	Q9Y6H8	435 aa		13.59	□□□□□ -0.23
SCNN1A-223	ENST00000545605	CCDC69	A6NI79	296 aa		13.58	□□□□□ -0.24
SCNN1A-223	ENST00000545605	DDAH1	O94760	285 aa		13.58	□□□□□ -0.24
SCNN1A-223	ENST00000545605	PDIA3	P30101	505 aa	Known RBP	13.58	□□□□□ -0.24
SCNN1A-223	ENST00000545605	SCRN1	Q12765	414 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms