RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 SLC10A5Q5PT55 438 aa14.34□□□□□ -0.11
PAAF1-215ENST00000544909 KRBA2Q6ZNG9 492 aa14.34□□□□□ -0.11
PAAF1-215ENST00000544909 CRACR2BQ8N4Y2 399 aaPredicted RBP14.34□□□□□ -0.11
PAAF1-215ENST00000544909 UBAC1Q9BSL1 405 aa14.34□□□□□ -0.11
PAAF1-215ENST00000544909 KCNH3Q9ULD8 1083 aa14.34□□□□□ -0.11
PAAF1-215ENST00000544909 CNTNAP4Q9C0A0 1308 aa14.34□□□□□ -0.11
PAAF1-215ENST00000544909 MYH14Q7Z406 1995 aaKnown RBP14.34□□□□□ -0.11
PAAF1-215ENST00000544909 DUOX1Q9NRD9 1551 aa14.34□□□□□ -0.11
PAAF1-215ENST00000544909 TPD52L1Q16890 204 aaPredicted RBP14.34□□□□□ -0.11
PAAF1-215ENST00000544909 CAVIN4Q5BKX8 364 aa14.34□□□□□ -0.11
PAAF1-215ENST00000544909 NBPF11Q86T75 865 aa14.34□□□□□ -0.11
PAAF1-215ENST00000544909 ANKRD18AQ8IVF6 992 aa14.34□□□□□ -0.11
PAAF1-215ENST00000544909 ZNF654Q8IZM8 581 aa14.34□□□□□ -0.11
PAAF1-215ENST00000544909 LCORLQ8N3X6 602 aa14.34□□□□□ -0.11
PAAF1-215ENST00000544909 FANCBQ8NB91 859 aa14.34□□□□□ -0.11
PAAF1-215ENST00000544909 PHKBQ93100 1093 aa14.34□□□□□ -0.11
PAAF1-215ENST00000544909 CCDC94Q9BW85 323 aaPredicted RBP14.34□□□□□ -0.11
PAAF1-215ENST00000544909 SLC26A6Q9BXS9 759 aa14.34□□□□□ -0.11
PAAF1-215ENST00000544909 SFPQP23246 707 aaKnown RBP eCLIP14.33□□□□□ -0.12
PAAF1-215ENST00000544909 SEC23AQ15436 765 aa14.33□□□□□ -0.12
PAAF1-215ENST00000544909 OLFM4Q6UX06 510 aa14.33□□□□□ -0.12
PAAF1-215ENST00000544909 FCHSD1Q86WN1 690 aa14.33□□□□□ -0.12
PAAF1-215ENST00000544909 DIS3L2Q8IYB7 885 aaKnown RBP14.33□□□□□ -0.12
PAAF1-215ENST00000544909 HELBQ8NG08 1087 aaPredicted RBP14.33□□□□□ -0.12
PAAF1-215ENST00000544909 SEC31BQ9NQW1 1179 aa14.33□□□□□ -0.12
PAAF1-215ENST00000544909 CACNA1SQ13698 1873 aa14.33□□□□□ -0.12
PAAF1-215ENST00000544909 DLEC1Q9Y238 1755 aa14.33□□□□□ -0.12
PAAF1-215ENST00000544909 MAST2Q6P0Q8 1798 aa14.32□□□□□ -0.12
PAAF1-215ENST00000544909 DDAH1O94760 285 aa14.32□□□□□ -0.12
PAAF1-215ENST00000544909 BCAMP50895 628 aa14.32□□□□□ -0.12
PAAF1-215ENST00000544909 PTPN14Q15678 1187 aa14.32□□□□□ -0.12
PAAF1-215ENST00000544909 FAM177A1Q8N128 213 aaPredicted RBP14.32□□□□□ -0.12
PAAF1-215ENST00000544909 CCAR2Q8N163 923 aaKnown RBP14.32□□□□□ -0.12
PAAF1-215ENST00000544909 PDCL2Q8N4E4 241 aa14.32□□□□□ -0.12
PAAF1-215ENST00000544909 MLKLQ8NB16 471 aa14.32□□□□□ -0.12
PAAF1-215ENST00000544909 C16orf45Q96MC5 204 aaPredicted RBP14.32□□□□□ -0.12
PAAF1-215ENST00000544909 PYM1Q9BRP8 204 aaKnown RBP14.32□□□□□ -0.12
PAAF1-215ENST00000544909 RIOK1Q9BRS2 568 aaKnown RBP14.32□□□□□ -0.12
PAAF1-215ENST00000544909 NYXQ9GZU5 481 aa14.32□□□□□ -0.12
PAAF1-215ENST00000544909 BCL2L12Q9HB09 334 aa14.32□□□□□ -0.12
PAAF1-215ENST00000544909 SRPRBQ9Y5M8 271 aaKnown RBP14.32□□□□□ -0.12
PAAF1-215ENST00000544909 MAGEB6P1A0A0J9YX57 407 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 CYP7A1P22680 504 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 MARCKSP29966 332 aaPredicted RBP14.31□□□□□ -0.12
PAAF1-215ENST00000544909 RBM10P98175 930 aaKnown RBP14.31□□□□□ -0.12
PAAF1-215ENST00000544909 CTDSPL2Q05D32 466 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 ITPK1Q13572 414 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 CEP135Q66GS9 1140 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 IQCA1Q86XH1 822 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 CNNM3Q8NE01 707 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 AIFM3Q96NN9 605 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 GJB4Q9NTQ9 266 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 COL24A1Q17RW2 1714 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 KIAA1551Q9HCM1 1747 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 ORC4O43929 436 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 PPFIA3O75145 1194 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 RC3H1Q5TC82 1133 aaKnown RBP14.31□□□□□ -0.12
PAAF1-215ENST00000544909 FILIP1Q7Z7B0 1213 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 ZNF710Q8N1W2 664 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 MARCH10Q8NA82 808 aaPredicted RBP14.31□□□□□ -0.12
PAAF1-215ENST00000544909 SPATA20Q8TB22 786 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 XPO4Q9C0E2 1151 aaKnown RBP14.31□□□□□ -0.12
PAAF1-215ENST00000544909 SENP2Q9HC62 589 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 FBXO2Q9UK22 296 aaPredicted RBP14.31□□□□□ -0.12
PAAF1-215ENST00000544909 KAT6BQ8WYB5 2073 aa14.31□□□□□ -0.12
PAAF1-215ENST00000544909 PRPF3O43395 683 aaKnown RBP14.3□□□□□ -0.12
PAAF1-215ENST00000544909 MDM2Q00987 491 aaPredicted RBP14.3□□□□□ -0.12
PAAF1-215ENST00000544909 AKAP17AQ02040 695 aaKnown RBP14.3□□□□□ -0.12
PAAF1-215ENST00000544909 METTL16Q86W50 562 aaKnown RBP14.3□□□□□ -0.12
PAAF1-215ENST00000544909 KIF18AQ8NI77 898 aa14.3□□□□□ -0.12
PAAF1-215ENST00000544909 FERMT2Q96AC1 680 aa14.3□□□□□ -0.12
PAAF1-215ENST00000544909 FEZ1Q99689 392 aa14.3□□□□□ -0.12
PAAF1-215ENST00000544909 BRMS1Q9HCU9 246 aa14.3□□□□□ -0.12
PAAF1-215ENST00000544909 IFNKQ9P0W0 207 aa14.3□□□□□ -0.12
PAAF1-215ENST00000544909 TNKSO95271 1327 aa14.3□□□□□ -0.12
PAAF1-215ENST00000544909 SMC2O95347 1197 aa14.29□□□□□ -0.12
PAAF1-215ENST00000544909 TRAPPC10P48553 1259 aa14.29□□□□□ -0.12
PAAF1-215ENST00000544909 SARSP49591 514 aaKnown RBP14.29□□□□□ -0.12
PAAF1-215ENST00000544909 FANCCQ00597 558 aa14.29□□□□□ -0.12
PAAF1-215ENST00000544909 CATIPQ7Z7H3 387 aa14.29□□□□□ -0.12
PAAF1-215ENST00000544909 RAB11FIP4Q86YS3 637 aa14.29□□□□□ -0.12
PAAF1-215ENST00000544909 STK11IPQ8N1F8 1099 aa14.29□□□□□ -0.12
PAAF1-215ENST00000544909 NKX2-3Q8TAU0 364 aa14.29□□□□□ -0.12
PAAF1-215ENST00000544909 ZSCAN10Q96SZ4 725 aaPredicted RBP14.29□□□□□ -0.12
PAAF1-215ENST00000544909 ANKRD2Q9GZV1 360 aa14.29□□□□□ -0.12
PAAF1-215ENST00000544909 ATP8A2Q9NTI2 1148 aa14.29□□□□□ -0.12
PAAF1-215ENST00000544909 AATFQ9NY61 560 aaKnown RBP eCLIP14.29□□□□□ -0.12
PAAF1-215ENST00000544909 BTBD18B2RXH4 712 aa14.29□□□□□ -0.12
PAAF1-215ENST00000544909 RXRAP19793 462 aa14.29□□□□□ -0.12
PAAF1-215ENST00000544909 ERCC5P28715 1186 aaPredicted RBP14.29□□□□□ -0.12
PAAF1-215ENST00000544909 TOB1P50616 345 aaPredicted RBP14.29□□□□□ -0.12
PAAF1-215ENST00000544909 POSTNQ15063 836 aa14.29□□□□□ -0.12
PAAF1-215ENST00000544909 FBXO33Q7Z6M2 555 aa14.29□□□□□ -0.12
PAAF1-215ENST00000544909 ENOX1Q8TC92 643 aaKnown RBP14.29□□□□□ -0.12
PAAF1-215ENST00000544909 HSD3B7Q9H2F3 369 aa14.29□□□□□ -0.12
PAAF1-215ENST00000544909 TACC3Q9Y6A5 838 aa14.29□□□□□ -0.12
PAAF1-215ENST00000544909 GOLGA6L9A6NEM1 432 aa14.28□□□□□ -0.12
PAAF1-215ENST00000544909 PRKAB2O43741 272 aa14.28□□□□□ -0.12
PAAF1-215ENST00000544909 FUT2Q10981 343 aa14.28□□□□□ -0.12
PAAF1-215ENST00000544909 SEMA3FQ13275 785 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms