RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 PPM1JQ5JR12 505 aa3.87□□□□□ -1.79
YBX3-214ENST00000544501 FBLIM1Q8WUP2 373 aa3.87□□□□□ -1.79
YBX3-214ENST00000544501 C7orf69Q9H7B7 122 aa3.87□□□□□ -1.79
YBX3-214ENST00000544501 PICK1Q9NRD5 415 aa3.87□□□□□ -1.79
YBX3-214ENST00000544501 ADAM30Q9UKF2 790 aa3.87□□□□□ -1.79
YBX3-214ENST00000544501 PCDHGB7Q9Y5F8 929 aa3.87□□□□□ -1.79
YBX3-214ENST00000544501 PRR36Q9H6K5 1346 aa3.87□□□□□ -1.79
YBX3-214ENST00000544501 DYRK3O43781 588 aa3.86□□□□□ -1.79
YBX3-214ENST00000544501 RNGTTO60942 597 aaKnown RBP3.86□□□□□ -1.79
YBX3-214ENST00000544501 HCLS1P14317 486 aaPredicted RBP3.86□□□□□ -1.79
YBX3-214ENST00000544501 RAB6AP20340 208 aa3.86□□□□□ -1.79
YBX3-214ENST00000544501 ERCC5P28715 1186 aaPredicted RBP3.86□□□□□ -1.79
YBX3-214ENST00000544501 APOBRQ0VD83 1088 aa3.86□□□□□ -1.79
YBX3-214ENST00000544501 COL9A2Q14055 689 aaPredicted RBP3.86□□□□□ -1.79
YBX3-214ENST00000544501 NFKBIBQ15653 356 aa3.86□□□□□ -1.79
YBX3-214ENST00000544501 C9orf131Q5VYM1 1079 aa3.86□□□□□ -1.79
YBX3-214ENST00000544501 RNF43Q68DV7 783 aa3.86□□□□□ -1.79
YBX3-214ENST00000544501 SEZ6L2Q6UXD5 910 aa3.86□□□□□ -1.79
YBX3-214ENST00000544501 CDC37L1Q7L3B6 337 aa3.86□□□□□ -1.79
YBX3-214ENST00000544501 REC114Q7Z4M0 266 aa3.86□□□□□ -1.79
YBX3-214ENST00000544501 NPM2Q86SE8 214 aaKnown RBP3.86□□□□□ -1.79
YBX3-214ENST00000544501 HID1Q8IV36 788 aa3.86□□□□□ -1.79
YBX3-214ENST00000544501 SLITRK4Q8IW52 837 aa3.86□□□□□ -1.79
YBX3-214ENST00000544501 REXO1Q8N1G1 1221 aaKnown RBP3.86□□□□□ -1.79
YBX3-214ENST00000544501 GIMAP7Q8NHV1 300 aa3.86□□□□□ -1.79
YBX3-214ENST00000544501 ISL2Q96A47 359 aa3.86□□□□□ -1.79
YBX3-214ENST00000544501 EAF1Q96JC9 268 aaPredicted RBP3.86□□□□□ -1.79
YBX3-214ENST00000544501 SSU72Q9NP77 194 aaKnown RBP3.86□□□□□ -1.79
YBX3-214ENST00000544501 DAGLAQ9Y4D2 1042 aa3.86□□□□□ -1.79
YBX3-214ENST00000544501 CSADQ9Y600 493 aa3.86□□□□□ -1.79
YBX3-214ENST00000544501 HMX2A2RU54 273 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 PRAMEF27A3QJZ7 478 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 ATE1O95260 518 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 FSTP19883 344 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 GRK4P32298 578 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 CRKP46108 304 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 GJA8P48165 433 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 CDK8P49336 464 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 ETF1P62495 437 aaKnown RBP3.85□□□□□ -1.79
YBX3-214ENST00000544501 NFIAQ12857 509 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 CPSF6Q16630 551 aaKnown RBP eCLIP3.85□□□□□ -1.79
YBX3-214ENST00000544501 TMEM201Q5SNT2 666 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 MCATQ8IVS2 390 aaKnown RBP3.85□□□□□ -1.79
YBX3-214ENST00000544501 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.85□□□□□ -1.79
YBX3-214ENST00000544501 FBXO27Q8NI29 283 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 RASGRP4Q8TDF6 673 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 NKD1Q969G9 470 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 PSMG3-AS1Q96PY0 264 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 DBNDD2Q9BQY9 259 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 CCSER2Q9H7U1 834 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 EHMT1Q9H9B1 1298 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 C1GALT1Q9NS00 363 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 UBP1Q9NZI7 540 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 PRKAG2Q9UGJ0 569 aa3.85□□□□□ -1.79
YBX3-214ENST00000544501 LRIG2O94898 1065 aa3.84□□□□□ -1.79
YBX3-214ENST00000544501 IGLV1-40P01703 118 aa3.84□□□□□ -1.79
YBX3-214ENST00000544501 PGRP06401 933 aa3.84□□□□□ -1.79
YBX3-214ENST00000544501 FURINP09958 794 aa3.84□□□□□ -1.79
YBX3-214ENST00000544501 ZNF165P49910 485 aa3.84□□□□□ -1.79
YBX3-214ENST00000544501 CYP27A1Q02318 531 aa3.84□□□□□ -1.79
YBX3-214ENST00000544501 PAK2Q13177 524 aa3.84□□□□□ -1.79
YBX3-214ENST00000544501 GNL2Q13823 731 aaKnown RBP3.84□□□□□ -1.79
YBX3-214ENST00000544501 MLECQ14165 292 aa3.84□□□□□ -1.79
YBX3-214ENST00000544501 SEZ6Q53EL9 994 aa3.84□□□□□ -1.79
YBX3-214ENST00000544501 SLC6A19Q695T7 634 aa3.84□□□□□ -1.79
YBX3-214ENST00000544501 ZAR1Q86SH2 424 aa3.84□□□□□ -1.79
YBX3-214ENST00000544501 MRPL41Q8IXM3 137 aaKnown RBP3.84□□□□□ -1.79
YBX3-214ENST00000544501 MFSD2AQ8NA29 543 aa3.84□□□□□ -1.79
YBX3-214ENST00000544501 GPRASP2Q96D09 838 aa3.84□□□□□ -1.79
YBX3-214ENST00000544501 SEMA6BQ9H3T3 888 aa3.84□□□□□ -1.79
YBX3-214ENST00000544501 BRMS1Q9HCU9 246 aa3.84□□□□□ -1.79
YBX3-214ENST00000544501 POLR3KQ9Y2Y1 108 aaPredicted RBP3.84□□□□□ -1.79
YBX3-214ENST00000544501 K7ELQ4 463 aaPredicted RBP3.83□□□□□ -1.8
YBX3-214ENST00000544501 TLR3O15455 904 aaKnown RBP3.83□□□□□ -1.8
YBX3-214ENST00000544501 DYNC1LI2O43237 492 aaPredicted RBP3.83□□□□□ -1.8
YBX3-214ENST00000544501 HTR3BO95264 441 aa3.83□□□□□ -1.8
YBX3-214ENST00000544501 IMPDH2P12268 514 aa3.83□□□□□ -1.8
YBX3-214ENST00000544501 PLCG1P19174 1290 aa3.83□□□□□ -1.8
YBX3-214ENST00000544501 YARSP54577 528 aaKnown RBP3.83□□□□□ -1.8
YBX3-214ENST00000544501 SLBPQ14493 270 aaKnown RBP eCLIP3.83□□□□□ -1.8
YBX3-214ENST00000544501 LRRFIP1Q32MZ4 808 aaKnown RBP3.83□□□□□ -1.8
YBX3-214ENST00000544501 PRSS36Q5K4E3 855 aa3.83□□□□□ -1.8
YBX3-214ENST00000544501 OGFOD3Q6PK18 319 aa3.83□□□□□ -1.8
YBX3-214ENST00000544501 SLFN12Q8IYM2 578 aa3.83□□□□□ -1.8
YBX3-214ENST00000544501 GATA6Q92908 595 aa3.83□□□□□ -1.8
YBX3-214ENST00000544501 SEC16BQ96JE7 1060 aa3.83□□□□□ -1.8
YBX3-214ENST00000544501 TBC1D32Q96NH3 1257 aa3.83□□□□□ -1.8
YBX3-214ENST00000544501 METTL22Q9BUU2 404 aaPredicted RBP3.83□□□□□ -1.8
YBX3-214ENST00000544501 FOXQ1Q9C009 403 aa3.83□□□□□ -1.8
YBX3-214ENST00000544501 ACBD3Q9H3P7 528 aa3.83□□□□□ -1.8
YBX3-214ENST00000544501 FBRSQ9HAH7 460 aa3.83□□□□□ -1.8
YBX3-214ENST00000544501 TJP2Q9UDY2 1190 aa3.83□□□□□ -1.8
YBX3-214ENST00000544501 INPP5FQ9Y2H2 1132 aa3.83□□□□□ -1.8
YBX3-214ENST00000544501 PCDHB14Q9Y5E9 798 aa3.83□□□□□ -1.8
YBX3-214ENST00000544501 GRIN3BO60391 1043 aa3.82□□□□□ -1.8
YBX3-214ENST00000544501 CST3P01034 146 aaPredicted RBP3.82□□□□□ -1.8
YBX3-214ENST00000544501 MCM4P33991 863 aa3.82□□□□□ -1.8
YBX3-214ENST00000544501 SOX9P48436 509 aa3.82□□□□□ -1.8
YBX3-214ENST00000544501 ZC3H6P61129 1189 aaKnown RBP3.82□□□□□ -1.8
YBX3-214ENST00000544501 NKG7Q16617 165 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms