RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 CCDC77Q9BR77 488 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 SMYD2Q9NRG4 433 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.04□□□□□ -1.28
DMD-228ENST00000541735 GRM8O00222 908 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 GTF2F1P35269 517 aaKnown RBP eCLIP7.04□□□□□ -1.28
DMD-228ENST00000541735 OSTNP61366 133 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 KRT81Q14533 505 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 NXNQ6DKJ4 435 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 ATRIPQ8WXE1 791 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 PSPC1Q8WXF1 523 aaKnown RBP7.04□□□□□ -1.28
DMD-228ENST00000541735 GUCA1BQ9UMX6 200 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 CDR2Q01850 454 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 LRRC47Q8N1G4 583 aaKnown RBP7.04□□□□□ -1.28
DMD-228ENST00000541735 NOX5Q96PH1 765 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 TIMM10P62072 90 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 SND1Q7KZF4 910 aaKnown RBP eCLIP7.04□□□□□ -1.28
DMD-228ENST00000541735 DENND2AQ9ULE3 1009 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 CTNND2Q9UQB3 1225 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 LRRIQ4A6NIV6 560 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 ZEB2O60315 1214 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 ATP6V1E1P36543 226 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 NFX1Q12986 1120 aaKnown RBP7.04□□□□□ -1.28
DMD-228ENST00000541735 HP1BP3Q5SSJ5 553 aaPredicted RBP7.04□□□□□ -1.28
DMD-228ENST00000541735 SEL1L2Q5TEA6 688 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 GIMAP6Q6P9H5 292 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 SCYL1Q96KG9 808 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 SCAND2PQ9GZW5 306 aaPredicted RBP7.04□□□□□ -1.28
DMD-228ENST00000541735 MRPL44Q9H9J2 332 aaKnown RBP7.04□□□□□ -1.28
DMD-228ENST00000541735 NESP48681 1621 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 PABPC4Q13310 644 aaKnown RBP eCLIP7.04□□□□□ -1.28
DMD-228ENST00000541735 KCTD2Q14681 263 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 MCMDC2Q4G0Z9 681 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 MUM1L1Q5H9M0 696 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 FASTKD5Q7L8L6 764 aaKnown RBP7.04□□□□□ -1.28
DMD-228ENST00000541735 PHLDB2Q86SQ0 1253 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 TRIM50Q86XT4 487 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 MORC4Q8TE76 937 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 ZNF830Q96NB3 372 aaPredicted RBP7.04□□□□□ -1.28
DMD-228ENST00000541735 MYL10Q9BUA6 226 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 POLR3EQ9NVU0 708 aa7.04□□□□□ -1.28
DMD-228ENST00000541735 FAM135AQ9P2D6 1515 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 GSTA1P08263 222 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 GSTA2P09210 222 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 RPS6KA2Q15349 733 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 MFSD14BQ5SR56 506 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 SV2BQ7L1I2 683 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 KIF18AQ8NI77 898 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 MBIPQ9NS73 344 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 GOLGA8CPA6NN73 597 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 NEMP1O14524 444 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 GOLGA8FQ08AF8 430 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 GOLGA8DPQ0D2H9 430 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 RBBP5Q15291 538 aaKnown RBP7.03□□□□□ -1.28
DMD-228ENST00000541735 CLUL1Q15846 466 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 KLHDC4Q8TBB5 520 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 GRPEL1Q9HAV7 217 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 AKNAQ7Z591 1439 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 UPP2O95045 317 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 SEC24BO95487 1268 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 RARSP54136 660 aaKnown RBP7.03□□□□□ -1.28
DMD-228ENST00000541735 NMIQ13287 307 aaPredicted RBP7.03□□□□□ -1.28
DMD-228ENST00000541735 STX1AQ16623 288 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 SH2D4BQ5SQS7 431 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 CCDC183Q5T5S1 534 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 RETREG2Q8NC44 543 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 NLRP7Q8WX94 980 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 ADPGKQ9BRR6 497 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 DLATP10515 647 aaKnown RBP7.03□□□□□ -1.28
DMD-228ENST00000541735 SSFA2P28290 1259 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 CYP2J2P51589 502 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 C2orf69Q8N8R5 385 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 KCNG4Q8TDN1 519 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 DPF3Q92784 378 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 ORAI2Q96SN7 254 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 HAUS2Q9NVX0 235 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 TNRQ92752 1358 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 ADGRF5Q8IZF2 1346 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 CYLC1P35663 651 aaPredicted RBP7.03□□□□□ -1.28
DMD-228ENST00000541735 BRD3Q15059 726 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 BEND3Q5T5X7 828 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 SDCCAG8Q86SQ7 713 aaPredicted RBP7.03□□□□□ -1.28
DMD-228ENST00000541735 MMTAG2Q9BU76 263 aaKnown RBP7.03□□□□□ -1.28
DMD-228ENST00000541735 BICC1Q9H694 974 aaKnown RBP7.03□□□□□ -1.28
DMD-228ENST00000541735 SH2B1Q9NRF2 756 aaPredicted RBP7.03□□□□□ -1.28
DMD-228ENST00000541735 SUFUQ9UMX1 484 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 CAMSAP2Q08AD1 1489 aa7.03□□□□□ -1.28
DMD-228ENST00000541735 TNFAIP1Q13829 316 aa7.02□□□□□ -1.28
DMD-228ENST00000541735 PNMA8AQ86V59 439 aaPredicted RBP7.02□□□□□ -1.28
DMD-228ENST00000541735 TMTC2Q8N394 836 aa7.02□□□□□ -1.28
DMD-228ENST00000541735 FAM49AQ9H0Q0 323 aaPredicted RBP7.02□□□□□ -1.28
DMD-228ENST00000541735 DISC1Q9NRI5 854 aa7.02□□□□□ -1.28
DMD-228ENST00000541735 RNF181Q9P0P0 153 aa7.02□□□□□ -1.28
DMD-228ENST00000541735 SMARCA4P51532 1647 aa7.02□□□□□ -1.28
DMD-228ENST00000541735 RTL9Q8NET4 1388 aa7.02□□□□□ -1.29
DMD-228ENST00000541735 PIK3R4Q99570 1358 aa7.02□□□□□ -1.29
DMD-228ENST00000541735 LIN9Q5TKA1 542 aa7.02□□□□□ -1.29
DMD-228ENST00000541735 MIER3Q7Z3K6 550 aa7.02□□□□□ -1.29
DMD-228ENST00000541735 LZTFL1Q9NQ48 299 aa7.02□□□□□ -1.29
DMD-228ENST00000541735 CNPY2Q9Y2B0 182 aa7.02□□□□□ -1.29
DMD-228ENST00000541735 ERBB3P21860 1342 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms