RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 PANX2Q96RD6 677 aa12.82□□□□□ -0.36
CPT1A-206ENST00000540367 PLEKHG2Q9H7P9 1386 aa12.82□□□□□ -0.36
CPT1A-206ENST00000540367 POTEB2H3BUK9 544 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 IARSP41252 1262 aaKnown RBP12.81□□□□□ -0.36
CPT1A-206ENST00000540367 TBC1D10CQ8IV04 446 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 TRIML1Q8N9V2 468 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 UBN2Q6ZU65 1347 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 STK36Q9NRP7 1315 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 ATRNO75882 1429 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 PARP4Q9UKK3 1724 aaKnown RBP12.81□□□□□ -0.36
CPT1A-206ENST00000540367 A0A1B0GTH6 734 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 AKR1B15C9JRZ8 316 aaPredicted RBP12.81□□□□□ -0.36
CPT1A-206ENST00000540367 RANBP6O60518 1105 aaKnown RBP12.81□□□□□ -0.36
CPT1A-206ENST00000540367 PRR29P0C7W0 189 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 MTF1Q14872 753 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 NR1I3Q14994 352 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 MICU3Q86XE3 530 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 TRMT44Q8IYL2 757 aaKnown RBP12.81□□□□□ -0.36
CPT1A-206ENST00000540367 STK11IPQ8N1F8 1099 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 MSL3Q8N5Y2 521 aaKnown RBP12.81□□□□□ -0.36
CPT1A-206ENST00000540367 IQUBQ8NA54 791 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 NKX2-3Q8TAU0 364 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 TRIM34Q9BYJ4 488 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 ANKZF1Q9H8Y5 726 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 PRDM11Q9NQV5 511 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
CPT1A-206ENST00000540367 TNS3Q68CZ2 1445 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 ZBTB43O43298 467 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 USP5P45974 858 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 LMAN1P49257 510 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 GYS2P54840 703 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 NOSTRINQ8IVI9 506 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 CEP112Q8N8E3 955 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 MSANTD4Q8NCY6 345 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 TMEM87BQ96K49 555 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 NAA15Q9BXJ9 866 aaKnown RBP12.8□□□□□ -0.36
CPT1A-206ENST00000540367 TEX13AQ9BXU3 409 aaPredicted RBP12.8□□□□□ -0.36
CPT1A-206ENST00000540367 IRX2Q9BZI1 471 aaPredicted RBP12.8□□□□□ -0.36
CPT1A-206ENST00000540367 SLAIN2Q9P270 581 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 CDC23Q9UJX2 597 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 RAB21Q9UL25 225 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 ADGRG1Q9Y653 693 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 SOWAHDA6NJG2 315 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 GOLGA8AA7E2F4 631 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 ZNF827Q17R98 1081 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 SPECC1Q5M775 1068 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 BEND6Q5SZJ8 279 aaPredicted RBP12.8□□□□□ -0.36
CPT1A-206ENST00000540367 TOM1L2Q6ZVM7 507 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 MED15Q96RN5 788 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.8□□□□□ -0.36
CPT1A-206ENST00000540367 SENP2Q9HC62 589 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 SAMSN1Q9NSI8 373 aaKnown RBP12.8□□□□□ -0.36
CPT1A-206ENST00000540367 SERTAD1Q9UHV2 236 aa12.8□□□□□ -0.36
CPT1A-206ENST00000540367 FBXO2Q9UK22 296 aaPredicted RBP12.8□□□□□ -0.36
CPT1A-206ENST00000540367 PTPREP23469 700 aa12.79□□□□□ -0.36
CPT1A-206ENST00000540367 PLCD1P51178 756 aa12.79□□□□□ -0.36
CPT1A-206ENST00000540367 TUBB2AQ13885 445 aa12.79□□□□□ -0.36
CPT1A-206ENST00000540367 CCDC57Q2TAC2 916 aa12.79□□□□□ -0.36
CPT1A-206ENST00000540367 SGMS1Q86VZ5 419 aa12.79□□□□□ -0.36
CPT1A-206ENST00000540367 TUBB2BQ9BVA1 445 aa12.79□□□□□ -0.36
CPT1A-206ENST00000540367 ZSWIM4Q9H7M6 989 aa12.79□□□□□ -0.36
CPT1A-206ENST00000540367 LZTFL1Q9NQ48 299 aa12.79□□□□□ -0.36
CPT1A-206ENST00000540367 FAM217BQ9NTX9 383 aaPredicted RBP12.79□□□□□ -0.36
CPT1A-206ENST00000540367 XIRP1Q702N8 1843 aaKnown RBP12.79□□□□□ -0.36
CPT1A-206ENST00000540367 POLR2DO15514 142 aaKnown RBP12.79□□□□□ -0.36
CPT1A-206ENST00000540367 KIF5CO60282 957 aa12.79□□□□□ -0.36
CPT1A-206ENST00000540367 ERCC5P28715 1186 aaPredicted RBP12.79□□□□□ -0.36
CPT1A-206ENST00000540367 ACTN2P35609 894 aa12.79□□□□□ -0.36
CPT1A-206ENST00000540367 TUBB4BP68371 445 aa12.79□□□□□ -0.36
CPT1A-206ENST00000540367 RAD9BQ6WBX8 426 aa12.79□□□□□ -0.36
CPT1A-206ENST00000540367 HDXQ7Z353 690 aa12.79□□□□□ -0.36
CPT1A-206ENST00000540367 RASSF4Q9H2L5 321 aa12.79□□□□□ -0.36
CPT1A-206ENST00000540367 AKAP11Q9UKA4 1901 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 B4E1Z4 1266 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 MYO1CO00159 1063 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 ERLIN1O75477 346 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 ADD2P35612 726 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 TOB1P50616 345 aaPredicted RBP12.78□□□□□ -0.36
CPT1A-206ENST00000540367 GRIN1Q05586 938 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 KANK3Q6NY19 840 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 SPATA20Q8TB22 786 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 IGDCC4Q8TDY8 1250 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 LY9Q9HBG7 655 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 PDE11AQ9HCR9 933 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 COL18A1P39060 1754 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 UBR2Q8IWV8 1755 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 EIF3JO75822 258 aaKnown RBP12.78□□□□□ -0.36
CPT1A-206ENST00000540367 FMNL1O95466 1100 aaPredicted RBP12.78□□□□□ -0.36
CPT1A-206ENST00000540367 SSRP1Q08945 709 aaKnown RBP12.78□□□□□ -0.36
CPT1A-206ENST00000540367 SLC9C2Q5TAH2 1124 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 NFXL1Q6ZNB6 911 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 APTXQ7Z2E3 356 aaKnown RBP12.78□□□□□ -0.36
CPT1A-206ENST00000540367 ZNF579Q8NAF0 562 aaKnown RBP12.78□□□□□ -0.36
CPT1A-206ENST00000540367 WASF1Q92558 559 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 PNKPQ96T60 521 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 SLC26A6Q9BXS9 759 aa12.78□□□□□ -0.36
CPT1A-206ENST00000540367 PUF60Q9UHX1 559 aaKnown RBP12.78□□□□□ -0.36
CPT1A-206ENST00000540367 MYO5AQ9Y4I1 1855 aaKnown RBP12.78□□□□□ -0.36
CPT1A-206ENST00000540367 LRP6O75581 1613 aa12.77□□□□□ -0.36
CPT1A-206ENST00000540367 UBE2Q2LH0YL09 131 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms