RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 BSDC1Q9NW68 430 aaPredicted RBP8.31□□□□□ -1.08
SSPN-206ENST00000539019 FAM8A1Q9UBU6 413 aa8.31□□□□□ -1.08
SSPN-206ENST00000539019 DISP1Q96F81 1524 aa8.3□□□□□ -1.08
SSPN-206ENST00000539019 FAM87AP0C7U9 286 aa8.3□□□□□ -1.08
SSPN-206ENST00000539019 ERVK-24P63145 666 aa8.3□□□□□ -1.08
SSPN-206ENST00000539019 RASIP1Q5U651 963 aa8.3□□□□□ -1.08
SSPN-206ENST00000539019 NFXL1Q6ZNB6 911 aa8.3□□□□□ -1.08
SSPN-206ENST00000539019 ANGEL1Q9UNK9 670 aaKnown RBP8.3□□□□□ -1.08
SSPN-206ENST00000539019 ARHGEF11O15085 1522 aa8.3□□□□□ -1.08
SSPN-206ENST00000539019 UGGT2Q9NYU1 1516 aa8.3□□□□□ -1.08
SSPN-206ENST00000539019 TRIM37O94972 964 aa8.29□□□□□ -1.08
SSPN-206ENST00000539019 CYP27C1Q4G0S4 372 aa8.29□□□□□ -1.08
SSPN-206ENST00000539019 RNF214Q8ND24 703 aa8.29□□□□□ -1.08
SSPN-206ENST00000539019 ISL2Q96A47 359 aa8.29□□□□□ -1.08
SSPN-206ENST00000539019 SSU72Q9NP77 194 aaKnown RBP8.29□□□□□ -1.08
SSPN-206ENST00000539019 CSADQ9Y600 493 aa8.29□□□□□ -1.08
SSPN-206ENST00000539019 CELA3AP09093 270 aa8.28□□□□□ -1.08
SSPN-206ENST00000539019 PDIA4P13667 645 aaKnown RBP8.28□□□□□ -1.08
SSPN-206ENST00000539019 TAL1P17542 331 aaPredicted RBP8.28□□□□□ -1.08
SSPN-206ENST00000539019 LLGL2Q6P1M3 1020 aa8.28□□□□□ -1.08
SSPN-206ENST00000539019 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.28□□□□□ -1.08
SSPN-206ENST00000539019 FRMD6Q96NE9 622 aa8.28□□□□□ -1.08
SSPN-206ENST00000539019 RNF19AQ9NV58 838 aa8.28□□□□□ -1.08
SSPN-206ENST00000539019 ARAP1Q96P48 1450 aa8.28□□□□□ -1.08
SSPN-206ENST00000539019 PRG4Q92954 1404 aaPredicted RBP8.27□□□□□ -1.09
SSPN-206ENST00000539019 ANKRD33BA6NCL7 494 aa8.27□□□□□ -1.09
SSPN-206ENST00000539019 DCDC2CA8MYV0 355 aa8.27□□□□□ -1.09
SSPN-206ENST00000539019 LEFTY1O75610 366 aa8.27□□□□□ -1.09
SSPN-206ENST00000539019 LRRC14Q15048 493 aa8.27□□□□□ -1.09
SSPN-206ENST00000539019 PPM1JQ5JR12 505 aa8.27□□□□□ -1.09
SSPN-206ENST00000539019 SND1Q7KZF4 910 aaKnown RBP eCLIP8.27□□□□□ -1.09
SSPN-206ENST00000539019 VSIG10LQ86VR7 867 aa8.27□□□□□ -1.09
SSPN-206ENST00000539019 C12orf40Q86WS4 652 aa8.27□□□□□ -1.09
SSPN-206ENST00000539019 ABI1Q8IZP0 508 aa8.27□□□□□ -1.09
SSPN-206ENST00000539019 ADGRE2Q9UHX3 823 aa8.27□□□□□ -1.09
SSPN-206ENST00000539019 GNA15P30679 374 aa8.26□□□□□ -1.09
SSPN-206ENST00000539019 PCNX4Q63HM2 1172 aa8.26□□□□□ -1.09
SSPN-206ENST00000539019 KRTAP9-2Q9BYQ4 174 aa8.26□□□□□ -1.09
SSPN-206ENST00000539019 PCDHA4Q9UN74 947 aa8.26□□□□□ -1.09
SSPN-206ENST00000539019 CYP8B1Q9UNU6 501 aa8.26□□□□□ -1.09
SSPN-206ENST00000539019 GOLGA3Q08378 1498 aa8.26□□□□□ -1.09
SSPN-206ENST00000539019 PRPF40AO75400 957 aaKnown RBP8.25□□□□□ -1.09
SSPN-206ENST00000539019 EIF4BP23588 611 aaKnown RBP8.25□□□□□ -1.09
SSPN-206ENST00000539019 COL19A1Q14993 1142 aa8.25□□□□□ -1.09
SSPN-206ENST00000539019 SV2BQ7L1I2 683 aa8.25□□□□□ -1.09
SSPN-206ENST00000539019 TP53INP2Q8IXH6 220 aa8.25□□□□□ -1.09
SSPN-206ENST00000539019 FBXL18Q96ME1 805 aa8.25□□□□□ -1.09
SSPN-206ENST00000539019 DUSP23Q9BVJ7 150 aa8.25□□□□□ -1.09
SSPN-206ENST00000539019 TTF2Q9UNY4 1162 aaKnown RBP8.25□□□□□ -1.09
SSPN-206ENST00000539019 LOC105371045A0A1W2PR82 267 aa8.24□□□□□ -1.09
SSPN-206ENST00000539019 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.24□□□□□ -1.09
SSPN-206ENST00000539019 RING1Q06587 406 aa8.24□□□□□ -1.09
SSPN-206ENST00000539019 FAM181AQ8N9Y4 354 aa8.24□□□□□ -1.09
SSPN-206ENST00000539019 DUSP9Q99956 384 aaKnown RBP8.24□□□□□ -1.09
SSPN-206ENST00000539019 AK5Q9Y6K8 562 aa8.24□□□□□ -1.09
SSPN-206ENST00000539019 U3KQE9 123 aa8.24□□□□□ -1.09
SSPN-206ENST00000539019 RIMBP3CA6NJZ7 1639 aa8.24□□□□□ -1.09
SSPN-206ENST00000539019 RIMBP3BA6NNM3 1639 aa8.24□□□□□ -1.09
SSPN-206ENST00000539019 RIMBP3Q9UFD9 1639 aa8.24□□□□□ -1.09
SSPN-206ENST00000539019 IQGAP2Q13576 1575 aa8.24□□□□□ -1.09
SSPN-206ENST00000539019 TNIKQ9UKE5 1360 aa8.24□□□□□ -1.09
SSPN-206ENST00000539019 NTF4P34130 210 aa8.23□□□□□ -1.09
SSPN-206ENST00000539019 PTPN11Q06124 597 aaPredicted RBP8.23□□□□□ -1.09
SSPN-206ENST00000539019 EAPPQ56P03 285 aaPredicted RBP8.23□□□□□ -1.09
SSPN-206ENST00000539019 SCARA3Q6AZY7 606 aa8.23□□□□□ -1.09
SSPN-206ENST00000539019 UBE3DQ7Z6J8 389 aa8.23□□□□□ -1.09
SSPN-206ENST00000539019 FLCNQ8NFG4 579 aa8.23□□□□□ -1.09
SSPN-206ENST00000539019 PICK1Q9NRD5 415 aa8.23□□□□□ -1.09
SSPN-206ENST00000539019 INPP5AQ14642 412 aa8.22□□□□□ -1.09
SSPN-206ENST00000539019 PLD6Q8N2A8 252 aaKnown RBP8.22□□□□□ -1.09
SSPN-206ENST00000539019 TOP6BLQ8N6T0 577 aa8.22□□□□□ -1.09
SSPN-206ENST00000539019 BCL7CQ8WUZ0 217 aaPredicted RBP8.22□□□□□ -1.09
SSPN-206ENST00000539019 PAK6Q9NQU5 681 aaPredicted RBP8.22□□□□□ -1.09
SSPN-206ENST00000539019 FANCGO15287 622 aa8.22□□□□□ -1.09
SSPN-206ENST00000539019 FGD1P98174 961 aa8.22□□□□□ -1.09
SSPN-206ENST00000539019 BNIP3Q12983 259 aa8.22□□□□□ -1.09
SSPN-206ENST00000539019 ZBTB37Q5TC79 503 aa8.22□□□□□ -1.09
SSPN-206ENST00000539019 NETO1Q8TDF5 533 aa8.22□□□□□ -1.09
SSPN-206ENST00000539019 ELMO3Q96BJ8 720 aa8.22□□□□□ -1.09
SSPN-206ENST00000539019 SLC5A6Q9Y289 635 aa8.22□□□□□ -1.09
SSPN-206ENST00000539019 SAMD9Q5K651 1589 aa8.21□□□□□ -1.09
SSPN-206ENST00000539019 ARHGAP35Q9NRY4 1499 aa8.21□□□□□ -1.1
SSPN-206ENST00000539019 KRTAP9-6A0A140TA67 174 aa8.21□□□□□ -1.1
SSPN-206ENST00000539019 TTBK2Q6IQ55 1244 aa8.21□□□□□ -1.1
SSPN-206ENST00000539019 LRFN4Q6PJG9 635 aa8.21□□□□□ -1.1
SSPN-206ENST00000539019 SPRED2Q7Z698 418 aa8.21□□□□□ -1.1
SSPN-206ENST00000539019 PAX4O43316 350 aa8.2□□□□□ -1.1
SSPN-206ENST00000539019 CCDC85BQ15834 202 aaPredicted RBP8.2□□□□□ -1.1
SSPN-206ENST00000539019 DNAJC14Q6Y2X3 702 aaPredicted RBP8.2□□□□□ -1.1
SSPN-206ENST00000539019 ZNF574Q6ZN55 896 aaPredicted RBP8.2□□□□□ -1.1
SSPN-206ENST00000539019 CDC37L1Q7L3B6 337 aa8.2□□□□□ -1.1
SSPN-206ENST00000539019 FAM214BQ7L5A3 538 aa8.2□□□□□ -1.1
SSPN-206ENST00000539019 WFDC3Q8IUB2 231 aa8.2□□□□□ -1.1
SSPN-206ENST00000539019 HEXIM2Q96MH2 286 aaKnown RBP8.2□□□□□ -1.1
SSPN-206ENST00000539019 PARP2Q9UGN5 583 aa8.2□□□□□ -1.1
SSPN-206ENST00000539019 KIAA0556O60303 1618 aa8.19□□□□□ -1.1
SSPN-206ENST00000539019 OXCT1P55809 520 aa8.19□□□□□ -1.1
SSPN-206ENST00000539019 CYB5RLQ6IPT4 315 aa8.19□□□□□ -1.1
SSPN-206ENST00000539019 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.19□□□□□ -1.1
SSPN-206ENST00000539019 CBLL1Q75N03 491 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms