RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 RAET1EQ8TD07 263 aa15.38■□□□□ 0.05
VAMP1-206ENST00000538970 DBNDD2Q9BQY9 259 aa15.38■□□□□ 0.05
VAMP1-206ENST00000538970 C1orf115Q9H7X2 142 aa15.38■□□□□ 0.05
VAMP1-206ENST00000538970 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.38■□□□□ 0.05
VAMP1-206ENST00000538970 LRP2BPQ9P2M1 347 aa15.38■□□□□ 0.05
VAMP1-206ENST00000538970 PTPRFP10586 1907 aa15.38■□□□□ 0.05
VAMP1-206ENST00000538970 GRK4P32298 578 aa15.37■□□□□ 0.05
VAMP1-206ENST00000538970 PRKCZQ05513 592 aa15.37■□□□□ 0.05
VAMP1-206ENST00000538970 OS9Q13438 667 aaPredicted RBP15.37■□□□□ 0.05
VAMP1-206ENST00000538970 MTFR1Q15390 333 aa15.37■□□□□ 0.05
VAMP1-206ENST00000538970 TTC39AQ5SRH9 613 aa15.37■□□□□ 0.05
VAMP1-206ENST00000538970 FTSJ3Q8IY81 847 aaKnown RBP15.37■□□□□ 0.05
VAMP1-206ENST00000538970 TEX11Q8IYF3 940 aa15.37■□□□□ 0.05
VAMP1-206ENST00000538970 SH3RF3Q8TEJ3 882 aaPredicted RBP15.37■□□□□ 0.05
VAMP1-206ENST00000538970 DPF3Q92784 378 aa15.37■□□□□ 0.05
VAMP1-206ENST00000538970 SNRKQ9NRH2 765 aa15.37■□□□□ 0.05
VAMP1-206ENST00000538970 AGTPBP1Q9UPW5 1226 aa15.37■□□□□ 0.05
VAMP1-206ENST00000538970 SURF6O75683 361 aaKnown RBP15.36■□□□□ 0.05
VAMP1-206ENST00000538970 RLBP1P12271 317 aa15.36■□□□□ 0.05
VAMP1-206ENST00000538970 CCDC158Q5M9N0 1113 aa15.36■□□□□ 0.05
VAMP1-206ENST00000538970 NAA16Q6N069 864 aaPredicted RBP15.36■□□□□ 0.05
VAMP1-206ENST00000538970 LRCH3Q96II8 777 aa15.36■□□□□ 0.05
VAMP1-206ENST00000538970 LAMA3Q16787 3333 aa15.36■□□□□ 0.05
VAMP1-206ENST00000538970 LOC285556D6RIA3 1793 aa15.36■□□□□ 0.05
VAMP1-206ENST00000538970 ZBTB7BO15156 539 aaPredicted RBP15.35■□□□□ 0.05
VAMP1-206ENST00000538970 CYP2E1P05181 493 aaPredicted RBP15.35■□□□□ 0.05
VAMP1-206ENST00000538970 RRP1BQ14684 758 aaKnown RBP15.35■□□□□ 0.05
VAMP1-206ENST00000538970 TREML2Q5T2D2 321 aa15.35■□□□□ 0.05
VAMP1-206ENST00000538970 ADGRA1Q86SQ6 560 aa15.35■□□□□ 0.05
VAMP1-206ENST00000538970 ITPRIPQ8IWB1 547 aa15.35■□□□□ 0.05
VAMP1-206ENST00000538970 SMCR8Q8TEV9 937 aaPredicted RBP15.35■□□□□ 0.05
VAMP1-206ENST00000538970 ZNF512BQ96KM6 892 aaPredicted RBP15.35■□□□□ 0.05
VAMP1-206ENST00000538970 NOL10Q9BSC4 688 aaKnown RBP15.35■□□□□ 0.05
VAMP1-206ENST00000538970 AATFQ9NY61 560 aaKnown RBP eCLIP15.35■□□□□ 0.05
VAMP1-206ENST00000538970 HERC5Q9UII4 1024 aaKnown RBP15.35■□□□□ 0.05
VAMP1-206ENST00000538970 NOP58Q9Y2X3 529 aaKnown RBP15.35■□□□□ 0.05
VAMP1-206ENST00000538970 SIPA1L1O43166 1804 aa15.35■□□□□ 0.05
VAMP1-206ENST00000538970 BAG3O95817 575 aa15.34■□□□□ 0.05
VAMP1-206ENST00000538970 CAP2P40123 477 aa15.34■□□□□ 0.05
VAMP1-206ENST00000538970 PPP4CP60510 307 aa15.34■□□□□ 0.05
VAMP1-206ENST00000538970 MIER1Q8N108 512 aa15.34■□□□□ 0.05
VAMP1-206ENST00000538970 PROCA1Q8NCQ7 364 aaPredicted RBP15.34■□□□□ 0.05
VAMP1-206ENST00000538970 ZNF280CQ8ND82 737 aa15.34■□□□□ 0.05
VAMP1-206ENST00000538970 SLAIN1Q8ND83 568 aa15.34■□□□□ 0.05
VAMP1-206ENST00000538970 TBC1D2Q9BYX2 928 aa15.34■□□□□ 0.05
VAMP1-206ENST00000538970 TLR7Q9NYK1 1049 aaKnown RBP15.34■□□□□ 0.05
VAMP1-206ENST00000538970 DBNLQ9UJU6 430 aaKnown RBP15.34■□□□□ 0.05
VAMP1-206ENST00000538970 PNMA3Q9UL41 463 aa15.34■□□□□ 0.05
VAMP1-206ENST00000538970 GABRQQ9UN88 632 aa15.34■□□□□ 0.05
VAMP1-206ENST00000538970 FLT1P17948 1338 aa15.34■□□□□ 0.05
VAMP1-206ENST00000538970 ATAD5Q96QE3 1844 aa15.33■□□□□ 0.05
VAMP1-206ENST00000538970 MGAMO43451 1857 aa15.33■□□□□ 0.05
VAMP1-206ENST00000538970 IGSF3O75054 1194 aa15.33■□□□□ 0.04
VAMP1-206ENST00000538970 PLCG2P16885 1265 aa15.33■□□□□ 0.04
VAMP1-206ENST00000538970 ZAP70P43403 619 aa15.33■□□□□ 0.04
VAMP1-206ENST00000538970 SPP2Q13103 211 aa15.33■□□□□ 0.04
VAMP1-206ENST00000538970 DHX36Q9H2U1 1008 aaKnown RBP15.33■□□□□ 0.04
VAMP1-206ENST00000538970 PIH1D3Q9NQM4 214 aaKnown RBP15.33■□□□□ 0.04
VAMP1-206ENST00000538970 PI4KBQ9UBF8 816 aa15.33■□□□□ 0.04
VAMP1-206ENST00000538970 FOCADQ5VW36 1801 aa15.32■□□□□ 0.04
VAMP1-206ENST00000538970 USP17L5A8MUK1 530 aa15.32■□□□□ 0.04
VAMP1-206ENST00000538970 TNPO2O14787 897 aaKnown RBP15.32■□□□□ 0.04
VAMP1-206ENST00000538970 CCL5P13501 91 aa15.32■□□□□ 0.04
VAMP1-206ENST00000538970 GJA8P48165 433 aa15.32■□□□□ 0.04
VAMP1-206ENST00000538970 MNX1P50219 401 aaPredicted RBP15.32■□□□□ 0.04
VAMP1-206ENST00000538970 HMGCS2P54868 508 aa15.32■□□□□ 0.04
VAMP1-206ENST00000538970 UBXN2AP68543 259 aa15.32■□□□□ 0.04
VAMP1-206ENST00000538970 FAM110CQ1W6H9 321 aa15.32■□□□□ 0.04
VAMP1-206ENST00000538970 CEP85Q6P2H3 762 aa15.32■□□□□ 0.04
VAMP1-206ENST00000538970 MAPKAPK5Q8IW41 473 aa15.32■□□□□ 0.04
VAMP1-206ENST00000538970 ANKRD13CQ8N6S4 541 aa15.32■□□□□ 0.04
VAMP1-206ENST00000538970 NKX2-3Q8TAU0 364 aa15.32■□□□□ 0.04
VAMP1-206ENST00000538970 EAF2Q96CJ1 260 aaPredicted RBP15.32■□□□□ 0.04
VAMP1-206ENST00000538970 DNAJC18Q9H819 358 aa15.32■□□□□ 0.04
VAMP1-206ENST00000538970 GJB1P08034 283 aa15.31■□□□□ 0.04
VAMP1-206ENST00000538970 FLT3LGP49771 235 aa15.31■□□□□ 0.04
VAMP1-206ENST00000538970 IRF5Q13568 498 aa15.31■□□□□ 0.04
VAMP1-206ENST00000538970 SH3D19Q5HYK7 790 aa15.31■□□□□ 0.04
VAMP1-206ENST00000538970 UBE2Q1Q7Z7E8 422 aa15.31■□□□□ 0.04
VAMP1-206ENST00000538970 METTL16Q86W50 562 aaKnown RBP15.31■□□□□ 0.04
VAMP1-206ENST00000538970 TGFBRAP1Q8WUH2 860 aa15.31■□□□□ 0.04
VAMP1-206ENST00000538970 CCDC8Q9H0W5 538 aaPredicted RBP15.31■□□□□ 0.04
VAMP1-206ENST00000538970 RNF208Q9H0X6 261 aa15.31■□□□□ 0.04
VAMP1-206ENST00000538970 AS3MTQ9HBK9 375 aa15.31■□□□□ 0.04
VAMP1-206ENST00000538970 BIN2Q9UBW5 565 aaPredicted RBP15.31■□□□□ 0.04
VAMP1-206ENST00000538970 ZBED9Q6R2W3 1325 aa15.31■□□□□ 0.04
VAMP1-206ENST00000538970 CDK5RAP2Q96SN8 1893 aa15.31■□□□□ 0.04
VAMP1-206ENST00000538970 CUL9Q8IWT3 2517 aa15.31■□□□□ 0.04
VAMP1-206ENST00000538970 ADCY3O60266 1144 aa15.3■□□□□ 0.04
VAMP1-206ENST00000538970 PABPC4Q13310 644 aaKnown RBP eCLIP15.3■□□□□ 0.04
VAMP1-206ENST00000538970 UNC80Q8N2C7 3258 aa15.3■□□□□ 0.04
VAMP1-206ENST00000538970 PXYLP1Q8TE99 480 aa15.3■□□□□ 0.04
VAMP1-206ENST00000538970 WDR18Q9BV38 432 aa15.3■□□□□ 0.04
VAMP1-206ENST00000538970 INHAP05111 366 aa15.29■□□□□ 0.04
VAMP1-206ENST00000538970 ASNSP08243 561 aa15.29■□□□□ 0.04
VAMP1-206ENST00000538970 ELNP15502 786 aa15.29■□□□□ 0.04
VAMP1-206ENST00000538970 GCLCP48506 637 aaPredicted RBP15.29■□□□□ 0.04
VAMP1-206ENST00000538970 JAG1P78504 1218 aa15.29■□□□□ 0.04
VAMP1-206ENST00000538970 MTMR2Q13614 643 aa15.29■□□□□ 0.04
VAMP1-206ENST00000538970 UNC93B1Q9H1C4 597 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms