RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 MLKLQ8NB16 471 aa10.26□□□□□ -0.77
SNHG1-209ENST00000538654 METTL14Q9HCE5 456 aaKnown RBP10.26□□□□□ -0.77
SNHG1-209ENST00000538654 INTS13Q9NVM9 706 aa10.26□□□□□ -0.77
SNHG1-209ENST00000538654 PUF60Q9UHX1 559 aaKnown RBP10.26□□□□□ -0.77
SNHG1-209ENST00000538654 MAP3K15Q6ZN16 1313 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 USP8P40818 1118 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 ZC3H6P61129 1189 aaKnown RBP10.25□□□□□ -0.77
SNHG1-209ENST00000538654 KIF23Q02241 960 aaPredicted RBP10.25□□□□□ -0.77
SNHG1-209ENST00000538654 NEXNQ0ZGT2 675 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 KIF4BQ2VIQ3 1234 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 MCTP2Q6DN12 878 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 TADA2BQ86TJ2 420 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 NGDNQ8NEJ9 315 aaKnown RBP10.25□□□□□ -0.77
SNHG1-209ENST00000538654 ENOX1Q8TC92 643 aaKnown RBP10.25□□□□□ -0.77
SNHG1-209ENST00000538654 AFAP1L1Q8TED9 768 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 PNKPQ96T60 521 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 ZSWIM4Q9H7M6 989 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 RAI14Q9P0K7 980 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 MYO1AQ9UBC5 1043 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 MROH7-TTC4A0A0A0MT08 1334 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 hCG_2014768A0A024R1R8 64 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 CPLX1O14810 134 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 SCNN1AP37088 669 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 AARSP49588 968 aaKnown RBP eCLIP10.25□□□□□ -0.775e-21■□□□□ 9.8
SNHG1-209ENST00000538654 ADKP55263 362 aaKnown RBP10.25□□□□□ -0.77
SNHG1-209ENST00000538654 PNOCQ13519 176 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 RESP18Q5W5W9 173 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 WDR93Q6P2C0 686 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 CLEC4GQ6UXB4 293 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 FAM204AQ9H8W3 233 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 TTF2Q9UNY4 1162 aaKnown RBP10.25□□□□□ -0.77
SNHG1-209ENST00000538654 ADGRG1Q9Y653 693 aa10.25□□□□□ -0.77
SNHG1-209ENST00000538654 OVOS2A0A0G2JMS6 1433 aa10.24□□□□□ -0.77
SNHG1-209ENST00000538654 ZNF18P17022 549 aa10.24□□□□□ -0.77
SNHG1-209ENST00000538654 NLRP6P59044 892 aa10.24□□□□□ -0.77
SNHG1-209ENST00000538654 PPFIBP1Q86W92 1011 aa10.24□□□□□ -0.77
SNHG1-209ENST00000538654 MRPL44Q9H9J2 332 aaKnown RBP10.24□□□□□ -0.77
SNHG1-209ENST00000538654 PLEKHG1Q9ULL1 1385 aa10.24□□□□□ -0.77
SNHG1-209ENST00000538654 N4BP1O75113 896 aaKnown RBP10.24□□□□□ -0.77
SNHG1-209ENST00000538654 EVA1CP58658 441 aa10.24□□□□□ -0.77
SNHG1-209ENST00000538654 CT47A1Q5JQC4 288 aaPredicted RBP10.24□□□□□ -0.77
SNHG1-209ENST00000538654 AKAP4Q5JQC9 854 aa10.24□□□□□ -0.77
SNHG1-209ENST00000538654 FOXR1Q6PIV2 292 aa10.24□□□□□ -0.77
SNHG1-209ENST00000538654 TRIML1Q8N9V2 468 aa10.24□□□□□ -0.77
SNHG1-209ENST00000538654 ZBTB9Q96C00 473 aa10.24□□□□□ -0.77
SNHG1-209ENST00000538654 CCDC51Q96ER9 411 aa10.24□□□□□ -0.77
SNHG1-209ENST00000538654 DESI2Q9BSY9 194 aa10.24□□□□□ -0.77
SNHG1-209ENST00000538654 LZTFL1Q9NQ48 299 aa10.24□□□□□ -0.77
SNHG1-209ENST00000538654 CTDP1Q9Y5B0 961 aaPredicted RBP10.24□□□□□ -0.77
SNHG1-209ENST00000538654 DIP2BQ9P265 1576 aa10.24□□□□□ -0.77
SNHG1-209ENST00000538654 BDNFP23560 247 aa10.23□□□□□ -0.77
SNHG1-209ENST00000538654 ZNF569Q5MCW4 686 aa10.23□□□□□ -0.77
SNHG1-209ENST00000538654 RASGRP2Q7LDG7 609 aa10.23□□□□□ -0.77
SNHG1-209ENST00000538654 PROCA1Q8NCQ7 364 aaPredicted RBP10.23□□□□□ -0.77
SNHG1-209ENST00000538654 NAPGQ99747 312 aaPredicted RBP10.23□□□□□ -0.77
SNHG1-209ENST00000538654 LGR6Q9HBX8 967 aa10.23□□□□□ -0.77
SNHG1-209ENST00000538654 NFE2L3Q9Y4A8 694 aa10.23□□□□□ -0.77
SNHG1-209ENST00000538654 PCDHA5Q9Y5H7 936 aa10.23□□□□□ -0.77
SNHG1-209ENST00000538654 MARCKSP29966 332 aaPredicted RBP10.23□□□□□ -0.77
SNHG1-209ENST00000538654 VSNL1P62760 191 aa10.23□□□□□ -0.77
SNHG1-209ENST00000538654 NR1I3Q14994 352 aa10.23□□□□□ -0.77
SNHG1-209ENST00000538654 ZMYM1Q5SVZ6 1142 aa10.23□□□□□ -0.77
SNHG1-209ENST00000538654 NBPF6Q5VWK0 638 aa10.23□□□□□ -0.77
SNHG1-209ENST00000538654 OTUD7BQ6GQQ9 843 aa10.23□□□□□ -0.77
SNHG1-209ENST00000538654 SHC4Q6S5L8 630 aa10.23□□□□□ -0.77
SNHG1-209ENST00000538654 DDX46Q7L014 1031 aaKnown RBP10.23□□□□□ -0.77
SNHG1-209ENST00000538654 METTL16Q86W50 562 aaKnown RBP10.23□□□□□ -0.77
SNHG1-209ENST00000538654 CCDC148Q8NFR7 591 aa10.23□□□□□ -0.77
SNHG1-209ENST00000538654 NBPF4Q96M43 638 aa10.23□□□□□ -0.77
SNHG1-209ENST00000538654 DDX21Q9NR30 783 aaKnown RBP eCLIP10.23□□□□□ -0.771e-323■■■□□ 15.6
SNHG1-209ENST00000538654 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.23□□□□□ -0.77
SNHG1-209ENST00000538654 GOLGA8BA8MQT2 603 aa10.22□□□□□ -0.77
SNHG1-209ENST00000538654 KCNQ3O43525 872 aa10.22□□□□□ -0.77
SNHG1-209ENST00000538654 RNF40O75150 1001 aa10.22□□□□□ -0.77
SNHG1-209ENST00000538654 CDKL5O76039 1030 aa10.22□□□□□ -0.77
SNHG1-209ENST00000538654 RHOXF2BP0C7M4 288 aa10.22□□□□□ -0.77
SNHG1-209ENST00000538654 HSPD1P10809 573 aaKnown RBP10.22□□□□□ -0.77
SNHG1-209ENST00000538654 TFCP2Q12800 502 aa10.22□□□□□ -0.77
SNHG1-209ENST00000538654 RPAINQ86UA6 219 aa10.22□□□□□ -0.77
SNHG1-209ENST00000538654 RHOXF2Q9BQY4 288 aa10.22□□□□□ -0.77
SNHG1-209ENST00000538654 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.22□□□□□ -0.77
SNHG1-209ENST00000538654 TOMM22Q9NS69 142 aa10.22□□□□□ -0.77
SNHG1-209ENST00000538654 KCNH3Q9ULD8 1083 aa10.22□□□□□ -0.77
SNHG1-209ENST00000538654 WDR19Q8NEZ3 1342 aa10.22□□□□□ -0.77
SNHG1-209ENST00000538654 HEG1Q9ULI3 1381 aa10.22□□□□□ -0.77
SNHG1-209ENST00000538654 SPEF2Q9C093 1822 aa10.22□□□□□ -0.77
SNHG1-209ENST00000538654 A0A1B0GTH6 734 aa10.22□□□□□ -0.77
SNHG1-209ENST00000538654 RIC3Q7Z5B4 369 aa10.22□□□□□ -0.77
SNHG1-209ENST00000538654 LTV1Q96GA3 475 aaPredicted RBP10.22□□□□□ -0.77
SNHG1-209ENST00000538654 PAG1Q9NWQ8 432 aa10.22□□□□□ -0.77
SNHG1-209ENST00000538654 KLF18A0A0U1RQI7 1052 aa10.21□□□□□ -0.77
SNHG1-209ENST00000538654 SOWAHDA6NJG2 315 aa10.21□□□□□ -0.77
SNHG1-209ENST00000538654 KIF28PB7ZC32 967 aa10.21□□□□□ -0.77
SNHG1-209ENST00000538654 ERLIN2O94905 339 aa10.21□□□□□ -0.77
SNHG1-209ENST00000538654 ERCC5P28715 1186 aaPredicted RBP10.21□□□□□ -0.77
SNHG1-209ENST00000538654 PROSER3Q2NL68 480 aa10.21□□□□□ -0.77
SNHG1-209ENST00000538654 TSNAXIP1Q2TAA8 658 aa10.21□□□□□ -0.77
SNHG1-209ENST00000538654 NT5DC1Q5TFE4 455 aa10.21□□□□□ -0.77
SNHG1-209ENST00000538654 KANK3Q6NY19 840 aa10.21□□□□□ -0.77
SNHG1-209ENST00000538654 CNGA4Q8IV77 575 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms