RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 RRP12Q5JTH9 1297 aaKnown RBP9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 ALS2CLQ60I27 953 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 MTHFD1LQ6UB35 978 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 CCNI2Q6ZMN8 369 aaPredicted RBP9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 TSHZ1Q6ZSZ6 1077 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 SLC35F6Q8N357 371 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 DTNBP1Q96EV8 351 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 PANX2Q96RD6 677 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 NOD2Q9HC29 1040 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 HAUS2Q9NVX0 235 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 MAST1Q9Y2H9 1570 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 CHD2O14647 1828 aaKnown RBP9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 TPP2P29144 1249 aaPredicted RBP9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 ADD1P35611 737 aaKnown RBP9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 ADKP55263 362 aaKnown RBP9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 ACCSLQ4AC99 568 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 NLRP14Q86W24 1093 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 EHBP1Q8NDI1 1231 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 CCT8L2Q96SF2 557 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 B4DLN1 442 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 TMEM232C9JQI7 657 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 SMIM24O75264 130 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 PPP1R37O75864 691 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 ATP6V1G2O95670 118 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 NBPF14Q5TI25 921 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 MSL1Q68DK7 614 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 NAA16Q6N069 864 aaPredicted RBP9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 OLFM4Q6UX06 510 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 TBC1D5Q92609 795 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 HSD3B7Q9H2F3 369 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 G3BP2Q9UN86 482 aaKnown RBP9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 CKAP4Q07065 602 aaKnown RBP9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 CUL3Q13618 768 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 NECTIN1Q15223 517 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 ZRSR2Q15696 482 aaKnown RBP9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 CADPS2Q86UW7 1296 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 GALNT15Q8N3T1 639 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 USP28Q96RU2 1077 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 NOP53Q9NZM5 478 aaKnown RBP9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 BAIAP2L1Q9UHR4 511 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 PLCH2O75038 1416 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 CDC42BPBQ9Y5S2 1711 aa9.59□□□□□ -0.87
SRGAP1-202ENST00000537556 AKR1B15C9JRZ8 316 aaPredicted RBP9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 HSF2BPO75031 334 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 ANP32DO95626 131 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 SFSWAPQ12872 951 aaKnown RBP9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 BLMHQ13867 455 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 PTGISQ16647 500 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 KDM7AQ6ZMT4 941 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 RASGRP2Q7LDG7 609 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 MYCBPAPQ8TBZ2 947 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 ATRIPQ8WXE1 791 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 RBM41Q96IZ5 413 aaKnown RBP9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 GDAP1L1Q96MZ0 367 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 GORASP1Q9BQQ3 440 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 CPSF1Q10570 1443 aaKnown RBP9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 A0A1B0GVL5 298 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 RNF8O76064 485 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 GNAT1P11488 350 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 NDUFA8P51970 172 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 ATP8B2P98198 1209 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 FAM69CQ0P6D2 419 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 RIPK1Q13546 671 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 ANKRD20A8PQ5CZ79 823 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 ACBD5Q5T8D3 534 aaPredicted RBP9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 IQCEQ6IPM2 695 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 RUBCNQ92622 972 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 TSPAN18Q96SJ8 248 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 TRIM4Q9C037 500 aa9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 IQCGQ9H095 443 aaKnown RBP9.58□□□□□ -0.88
SRGAP1-202ENST00000537556 NPHP4O75161 1426 aaPredicted RBP9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 DNAJC8O75937 253 aaPredicted RBP9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 KIF4AO95239 1232 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 LACTB2Q53H82 288 aaPredicted RBP9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 CCDC178Q5BJE1 867 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 EMC10Q5UCC4 262 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 CREB3L3Q68CJ9 461 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 UBE3BQ7Z3V4 1068 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 STAMBPL1Q96FJ0 436 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 NUP58Q9BVL2 599 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 RMI1Q9H9A7 625 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 PCDHA7Q9UN72 937 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 TRPM2O94759 1503 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 A6NHS1 94 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 PDLIM1O00151 329 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 FMNL1O95466 1100 aaPredicted RBP9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 PDE6BP35913 854 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 APBA1Q02410 837 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 PTH1RQ03431 593 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 STK3Q13188 491 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 GNPTABQ3T906 1256 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 NCAPH2Q6IBW4 605 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 RINLQ6ZS11 566 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 TRIM42Q8IWZ5 723 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 NBPF15Q8N660 670 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 TEX9Q8N6V9 391 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 RTEL1Q9NZ71 1219 aa9.57□□□□□ -0.88
SRGAP1-202ENST00000537556 SETD1AO15047 1707 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms