RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 THBS1P07996 1170 aa5.84□□□□□ -1.47
SNHG1-203ENST00000537024 SLURP2P0DP57 97 aa5.84□□□□□ -1.47
SNHG1-203ENST00000537024 XRCC5P13010 732 aaKnown RBP5.84□□□□□ -1.47
SNHG1-203ENST00000537024 SOX18P35713 384 aa5.84□□□□□ -1.47
SNHG1-203ENST00000537024 MLLT1Q03111 559 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-203ENST00000537024 PLAURQ03405 335 aa5.84□□□□□ -1.47
SNHG1-203ENST00000537024 ARID5AQ03989 594 aa5.84□□□□□ -1.47
SNHG1-203ENST00000537024 NEUROD1Q13562 356 aa5.84□□□□□ -1.47
SNHG1-203ENST00000537024 SLC15A2Q16348 729 aa5.84□□□□□ -1.47
SNHG1-203ENST00000537024 DBN1Q16643 649 aa5.84□□□□□ -1.47
SNHG1-203ENST00000537024 PRPF40BQ6NWY9 871 aaKnown RBP5.84□□□□□ -1.47
SNHG1-203ENST00000537024 DTHD1Q6ZMT9 781 aa5.84□□□□□ -1.47
SNHG1-203ENST00000537024 TRIM22Q8IYM9 498 aa5.84□□□□□ -1.47
SNHG1-203ENST00000537024 GLIS3Q8NEA6 775 aa5.84□□□□□ -1.47
SNHG1-203ENST00000537024 BHMTQ93088 406 aa5.84□□□□□ -1.47
SNHG1-203ENST00000537024 SPACA7Q96KW9 195 aa5.84□□□□□ -1.47
SNHG1-203ENST00000537024 NOC4LQ9BVI4 516 aaKnown RBP5.84□□□□□ -1.47
SNHG1-203ENST00000537024 OXCT2Q9BYC2 517 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-203ENST00000537024 SRA1Q9HD15 236 aaKnown RBP5.84□□□□□ -1.47
SNHG1-203ENST00000537024 STRN4Q9NRL3 753 aa5.84□□□□□ -1.47
SNHG1-203ENST00000537024 TLR7Q9NYK1 1049 aaKnown RBP5.84□□□□□ -1.47
SNHG1-203ENST00000537024 AKAP2Q9Y2D5 859 aa5.84□□□□□ -1.47
SNHG1-203ENST00000537024 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-203ENST00000537024 TRPM3Q9HCF6 1732 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-203ENST00000537024 ALS2Q96Q42 1657 aa5.84□□□□□ -1.47
SNHG1-203ENST00000537024 USP19O94966 1318 aa5.83□□□□□ -1.48
SNHG1-203ENST00000537024 BNIP3LO60238 219 aa5.83□□□□□ -1.48
SNHG1-203ENST00000537024 MAP3K6O95382 1288 aa5.83□□□□□ -1.48
SNHG1-203ENST00000537024 PWP1Q13610 501 aa5.83□□□□□ -1.48
SNHG1-203ENST00000537024 UBAP2LQ14157 1087 aaKnown RBP5.83□□□□□ -1.48
SNHG1-203ENST00000537024 CCDC85BQ15834 202 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-203ENST00000537024 ERMP1Q7Z2K6 904 aa5.83□□□□□ -1.48
SNHG1-203ENST00000537024 KRT28Q7Z3Y7 464 aa5.83□□□□□ -1.48
SNHG1-203ENST00000537024 SVOPQ8N4V2 548 aa5.83□□□□□ -1.48
SNHG1-203ENST00000537024 CCDC155Q8N6L0 562 aa5.83□□□□□ -1.48
SNHG1-203ENST00000537024 C3orf58Q8NDZ4 430 aa5.83□□□□□ -1.48
SNHG1-203ENST00000537024 ABHD17AQ96GS6 310 aa5.83□□□□□ -1.48
SNHG1-203ENST00000537024 GMCL1Q96IK5 515 aa5.83□□□□□ -1.48
SNHG1-203ENST00000537024 OSMRQ99650 979 aa5.83□□□□□ -1.48
SNHG1-203ENST00000537024 ZFYVE1Q9HBF4 777 aa5.83□□□□□ -1.48
SNHG1-203ENST00000537024 PPM1HQ9ULR3 514 aa5.83□□□□□ -1.48
SNHG1-203ENST00000537024 PHF24Q9UPV7 400 aa5.83□□□□□ -1.48
SNHG1-203ENST00000537024 LRRC37A3O60309 1634 aa5.83□□□□□ -1.48
SNHG1-203ENST00000537024 ATP7BP35670 1465 aa5.83□□□□□ -1.48
SNHG1-203ENST00000537024 NAIPQ13075 1403 aa5.82□□□□□ -1.48
SNHG1-203ENST00000537024 PDE4DIPQ5VU43 2346 aa5.82□□□□□ -1.48
SNHG1-203ENST00000537024 CICQ96RK0 1608 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-203ENST00000537024 TMEM238LA0A1B0GVL6 79 aa5.82□□□□□ -1.48
SNHG1-203ENST00000537024 KIF4AO95239 1232 aa5.82□□□□□ -1.48
SNHG1-203ENST00000537024 CD33P20138 364 aa5.82□□□□□ -1.48
SNHG1-203ENST00000537024 GTF2F1P35269 517 aaKnown RBP eCLIP5.82□□□□□ -1.48
SNHG1-203ENST00000537024 GRIN2CQ14957 1233 aa5.82□□□□□ -1.48
SNHG1-203ENST00000537024 KANK3Q6NY19 840 aa5.82□□□□□ -1.48
SNHG1-203ENST00000537024 DHX32Q7L7V1 743 aaKnown RBP5.82□□□□□ -1.48
SNHG1-203ENST00000537024 RAB44Q7Z6P3 723 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-203ENST00000537024 RELL1Q8IUW5 271 aa5.82□□□□□ -1.48
SNHG1-203ENST00000537024 NSUN5Q96P11 429 aaKnown RBP5.82□□□□□ -1.48
SNHG1-203ENST00000537024 GMLQ99445 158 aa5.82□□□□□ -1.48
SNHG1-203ENST00000537024 ZKSCAN3Q9BRR0 538 aa5.82□□□□□ -1.48
SNHG1-203ENST00000537024 ABCB6Q9NP58 842 aa5.82□□□□□ -1.48
SNHG1-203ENST00000537024 COPRSQ9NQ92 184 aa5.82□□□□□ -1.48
SNHG1-203ENST00000537024 KBTBD4Q9NVX7 518 aa5.82□□□□□ -1.48
SNHG1-203ENST00000537024 ATXN7L1Q9ULK2 861 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-203ENST00000537024 NRXN1Q9ULB1 1477 aa5.82□□□□□ -1.48
SNHG1-203ENST00000537024 TUBGCP6Q96RT7 1819 aa5.81□□□□□ -1.48
SNHG1-203ENST00000537024 RGPD8O14715 1765 aaPredicted RBP5.81□□□□□ -1.48
SNHG1-203ENST00000537024 RLBP1P12271 317 aa5.81□□□□□ -1.48
SNHG1-203ENST00000537024 RGS19P49795 217 aa5.81□□□□□ -1.48
SNHG1-203ENST00000537024 PAK2Q13177 524 aa5.81□□□□□ -1.48
SNHG1-203ENST00000537024 CCNJLQ8IV13 435 aa5.81□□□□□ -1.48
SNHG1-203ENST00000537024 DHX38Q92620 1227 aaKnown RBP5.81□□□□□ -1.48
SNHG1-203ENST00000537024 ARMC5Q96C12 935 aa5.81□□□□□ -1.48
SNHG1-203ENST00000537024 ZNF837Q96EG3 531 aaPredicted RBP5.81□□□□□ -1.48
SNHG1-203ENST00000537024 TCF12Q99081 682 aa5.81□□□□□ -1.48
SNHG1-203ENST00000537024 DNAJC2Q99543 621 aaKnown RBP5.81□□□□□ -1.48
SNHG1-203ENST00000537024 SLC30A3Q99726 388 aa5.81□□□□□ -1.48
SNHG1-203ENST00000537024 RSRP1Q9BUV0 290 aa5.81□□□□□ -1.48
SNHG1-203ENST00000537024 RRP7BPQ9NSQ0 103 aa5.81□□□□□ -1.48
SNHG1-203ENST00000537024 NDFIP2Q9NV92 336 aa5.81□□□□□ -1.48
SNHG1-203ENST00000537024 CUEDC1Q9NWM3 386 aaPredicted RBP5.81□□□□□ -1.48
SNHG1-203ENST00000537024 IFT172Q9UG01 1749 aa5.81□□□□□ -1.48
SNHG1-203ENST00000537024 MYOM3Q5VTT5 1437 aa5.81□□□□□ -1.48
SNHG1-203ENST00000537024 PHRF1Q9P1Y6 1649 aaKnown RBP5.81□□□□□ -1.48
SNHG1-203ENST00000537024 HOXD8P13378 290 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-203ENST00000537024 ACPPP15309 386 aa5.8□□□□□ -1.48
SNHG1-203ENST00000537024 FGFR3P22607 806 aa5.8□□□□□ -1.48
SNHG1-203ENST00000537024 ITGA6P23229 1130 aa5.8□□□□□ -1.48
SNHG1-203ENST00000537024 GBP2P32456 591 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-203ENST00000537024 GJA8P48165 433 aa5.8□□□□□ -1.48
SNHG1-203ENST00000537024 NRLP54845 237 aa5.8□□□□□ -1.48
SNHG1-203ENST00000537024 FOXR1Q6PIV2 292 aa5.8□□□□□ -1.48
SNHG1-203ENST00000537024 PTF1AQ7RTS3 328 aa5.8□□□□□ -1.48
SNHG1-203ENST00000537024 ANKRD24Q8TF21 1146 aa5.8□□□□□ -1.48
SNHG1-203ENST00000537024 GTPBP3Q969Y2 492 aaKnown RBP5.8□□□□□ -1.48
SNHG1-203ENST00000537024 GPRASP2Q96D09 838 aa5.8□□□□□ -1.48
SNHG1-203ENST00000537024 TRERF1Q96PN7 1200 aa5.8□□□□□ -1.48
SNHG1-203ENST00000537024 SPON2Q9BUD6 331 aa5.8□□□□□ -1.48
SNHG1-203ENST00000537024 CEP44Q9C0F1 390 aa5.8□□□□□ -1.48
SNHG1-203ENST00000537024 DZANK1Q9NVP4 752 aa5.8□□□□□ -1.48
SNHG1-203ENST00000537024 PRR12Q9ULL5 1215 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms