RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 FOXP1Q9H334 677 aaPredicted RBP15.72■□□□□ 0.11
SMG6-203ENST00000536871 PCDHA7Q9UN72 937 aa15.72■□□□□ 0.11
SMG6-203ENST00000536871 MRVI1Q9Y6F6 885 aa15.72■□□□□ 0.11
SMG6-203ENST00000536871 TNKSO95271 1327 aa15.72■□□□□ 0.11
SMG6-203ENST00000536871 LDHBP07195 334 aaKnown RBP15.71■□□□□ 0.11
SMG6-203ENST00000536871 TPM2P07951 284 aa15.71■□□□□ 0.11
SMG6-203ENST00000536871 GYS1P13807 737 aa15.71■□□□□ 0.11
SMG6-203ENST00000536871 CMA1P23946 247 aa15.71■□□□□ 0.11
SMG6-203ENST00000536871 STX1AQ16623 288 aa15.71■□□□□ 0.11
SMG6-203ENST00000536871 FAM182BQ5T319 152 aa15.71■□□□□ 0.11
SMG6-203ENST00000536871 CTR9Q6PD62 1173 aa15.71■□□□□ 0.11
SMG6-203ENST00000536871 SLF2Q8IX21 1173 aa15.71■□□□□ 0.11
SMG6-203ENST00000536871 CRAMP1Q96RY5 1269 aa15.71■□□□□ 0.11
SMG6-203ENST00000536871 LRRC4BQ9NT99 713 aa15.71■□□□□ 0.11
SMG6-203ENST00000536871 ZNF500O60304 480 aaPredicted RBP15.71■□□□□ 0.11
SMG6-203ENST00000536871 ADCY5O95622 1261 aa15.71■□□□□ 0.11
SMG6-203ENST00000536871 SERPINB2P05120 415 aa15.71■□□□□ 0.11
SMG6-203ENST00000536871 POLR3DP05423 398 aaPredicted RBP15.71■□□□□ 0.11
SMG6-203ENST00000536871 HOXA10P31260 410 aaPredicted RBP15.71■□□□□ 0.11
SMG6-203ENST00000536871 SNW1Q13573 536 aaKnown RBP15.71■□□□□ 0.11
SMG6-203ENST00000536871 IFIT1BQ5T764 474 aaKnown RBP15.71■□□□□ 0.11
SMG6-203ENST00000536871 CRACR2BQ8N4Y2 399 aaPredicted RBP15.71■□□□□ 0.11
SMG6-203ENST00000536871 TIGD1Q96MW7 591 aa15.71■□□□□ 0.11
SMG6-203ENST00000536871 NAT10Q9H0A0 1025 aaKnown RBP15.71■□□□□ 0.11
SMG6-203ENST00000536871 DCP1AQ9NPI6 582 aaPredicted RBP15.71■□□□□ 0.11
SMG6-203ENST00000536871 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.71■□□□□ 0.11
SMG6-203ENST00000536871 ANO10Q9NW15 660 aa15.71■□□□□ 0.11
SMG6-203ENST00000536871 PODXL2Q9NZ53 605 aa15.71■□□□□ 0.11
SMG6-203ENST00000536871 TFCP2L1Q9NZI6 479 aa15.71■□□□□ 0.11
SMG6-203ENST00000536871 MORC2Q9Y6X9 1032 aaPredicted RBP15.71■□□□□ 0.11
SMG6-203ENST00000536871 KIAA1551Q9HCM1 1747 aa15.7■□□□□ 0.1
SMG6-203ENST00000536871 RANBP6O60518 1105 aaKnown RBP15.7■□□□□ 0.1
SMG6-203ENST00000536871 PPP4CP60510 307 aa15.7■□□□□ 0.1
SMG6-203ENST00000536871 DYNLL1P63167 89 aaKnown RBP15.7■□□□□ 0.1
SMG6-203ENST00000536871 CHAF1AQ13111 956 aaPredicted RBP15.7■□□□□ 0.1
SMG6-203ENST00000536871 AMIGO3Q86WK7 504 aa15.7■□□□□ 0.1
SMG6-203ENST00000536871 RAB11FIP4Q86YS3 637 aa15.7■□□□□ 0.1
SMG6-203ENST00000536871 NAP1L5Q96NT1 182 aaPredicted RBP15.7■□□□□ 0.1
SMG6-203ENST00000536871 ZNF287Q9HBT7 754 aa15.7■□□□□ 0.1
SMG6-203ENST00000536871 SENP2Q9HC62 589 aa15.7■□□□□ 0.1
SMG6-203ENST00000536871 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.7■□□□□ 0.1
SMG6-203ENST00000536871 TACC3Q9Y6A5 838 aa15.7■□□□□ 0.1
SMG6-203ENST00000536871 KLRG2A4D1S0 409 aaPredicted RBP15.69■□□□□ 0.1
SMG6-203ENST00000536871 USP17L12C9JPN9 530 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 USP17L21D6R901 530 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 MMP1P03956 469 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 ZRSR1Q15695 479 aaKnown RBP15.69■□□□□ 0.1
SMG6-203ENST00000536871 RILPL1Q5EBL4 403 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 OTUD7BQ6GQQ9 843 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 SMIM5Q71RC9 77 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 CKAP2LQ8IYA6 745 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 FMR1NBQ8N0W7 255 aaPredicted RBP15.69■□□□□ 0.1
SMG6-203ENST00000536871 PHKBQ93100 1093 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.69■□□□□ 0.1
SMG6-203ENST00000536871 CEP131Q9UPN4 1083 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 CLIC4Q9Y696 253 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 TNRC6CQ9HCJ0 1690 aaKnown RBP15.69■□□□□ 0.1
SMG6-203ENST00000536871 PLCG2P16885 1265 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 KLRK1P26718 216 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 ZNF165P49910 485 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 ANO6Q4KMQ2 910 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.69■□□□□ 0.1
SMG6-203ENST00000536871 NOSTRINQ8IVI9 506 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 FLAD1Q8NFF5 587 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 ZNF384Q8TF68 577 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 TBC1D22AQ8WUA7 517 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 MAP3K14Q99558 947 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 INCENPQ9NQS7 918 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 AATFQ9NY61 560 aaKnown RBP eCLIP15.69■□□□□ 0.1
SMG6-203ENST00000536871 GGA1Q9UJY5 639 aa15.69■□□□□ 0.1
SMG6-203ENST00000536871 MYH13Q9UKX3 1938 aa15.68■□□□□ 0.1
SMG6-203ENST00000536871 FAM237AA0A1B0GTK4 181 aa15.68■□□□□ 0.1
SMG6-203ENST00000536871 KIF28PB7ZC32 967 aa15.68■□□□□ 0.1
SMG6-203ENST00000536871 RXRAP19793 462 aa15.68■□□□□ 0.1
SMG6-203ENST00000536871 PRDX5P30044 214 aa15.68■□□□□ 0.1
SMG6-203ENST00000536871 NBPF11Q86T75 865 aa15.68■□□□□ 0.1
SMG6-203ENST00000536871 ENAHQ8N8S7 591 aaPredicted RBP15.68■□□□□ 0.1
SMG6-203ENST00000536871 SDF4Q9BRK5 362 aa15.68■□□□□ 0.1
SMG6-203ENST00000536871 FTOQ9C0B1 505 aaKnown RBP eCLIP15.68■□□□□ 0.1
SMG6-203ENST00000536871 UBR3Q6ZT12 1888 aa15.68■□□□□ 0.1
SMG6-203ENST00000536871 PRPF3O43395 683 aaKnown RBP15.67■□□□□ 0.1
SMG6-203ENST00000536871 CUTAO60888 179 aa15.67■□□□□ 0.1
SMG6-203ENST00000536871 PPFIA3O75145 1194 aa15.67■□□□□ 0.1
SMG6-203ENST00000536871 BMP15O95972 392 aa15.67■□□□□ 0.1
SMG6-203ENST00000536871 IL1R1P14778 569 aa15.67■□□□□ 0.1
SMG6-203ENST00000536871 CCDC144CPQ8IYA2 1237 aa15.67■□□□□ 0.1
SMG6-203ENST00000536871 ELOA2Q8IYF1 753 aaPredicted RBP15.67■□□□□ 0.1
SMG6-203ENST00000536871 NKX2-3Q8TAU0 364 aa15.67■□□□□ 0.1
SMG6-203ENST00000536871 NUP133Q8WUM0 1156 aa15.67■□□□□ 0.1
SMG6-203ENST00000536871 MYL10Q9BUA6 226 aa15.67■□□□□ 0.1
SMG6-203ENST00000536871 GOLPH3LQ9H4A5 285 aa15.67■□□□□ 0.1
SMG6-203ENST00000536871 CBX8Q9HC52 389 aa15.67■□□□□ 0.1
SMG6-203ENST00000536871 BRMS1Q9HCU9 246 aa15.67■□□□□ 0.1
SMG6-203ENST00000536871 ROBO3Q96MS0 1386 aa15.67■□□□□ 0.1
SMG6-203ENST00000536871 WTIPA6NIX2 430 aaPredicted RBP15.67■□□□□ 0.1
SMG6-203ENST00000536871 GOLGA6L19H0YKK7 550 aa15.67■□□□□ 0.1
SMG6-203ENST00000536871 KIAA2012Q0VF49 1180 aa15.67■□□□□ 0.1
SMG6-203ENST00000536871 FAM177A1Q8N128 213 aaPredicted RBP15.67■□□□□ 0.1
SMG6-203ENST00000536871 CTCFLQ8NI51 663 aaPredicted RBP15.67■□□□□ 0.1
SMG6-203ENST00000536871 ZKSCAN3Q9BRR0 538 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms