RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 AXDND1Q5T1B0 1012 aaPredicted RBP15.5■□□□□ 0.07
VPS33B-202ENST00000535906 CTR9Q6PD62 1173 aa15.5■□□□□ 0.07
VPS33B-202ENST00000535906 ZNF654Q8IZM8 581 aa15.5■□□□□ 0.07
VPS33B-202ENST00000535906 ERCC4Q92889 916 aaPredicted RBP15.5■□□□□ 0.07
VPS33B-202ENST00000535906 TNKSO95271 1327 aa15.5■□□□□ 0.07
VPS33B-202ENST00000535906 A0A087WWV3 80 aa15.49■□□□□ 0.07
VPS33B-202ENST00000535906 EVX2Q03828 476 aa15.49■□□□□ 0.07
VPS33B-202ENST00000535906 TRIM29Q14134 588 aa15.49■□□□□ 0.07
VPS33B-202ENST00000535906 DNTTIP2Q5QJE6 756 aaKnown RBP15.49■□□□□ 0.07
VPS33B-202ENST00000535906 NBPF11Q86T75 865 aa15.49■□□□□ 0.07
VPS33B-202ENST00000535906 SEPT12Q8IYM1 358 aa15.49■□□□□ 0.07
VPS33B-202ENST00000535906 FANCBQ8NB91 859 aa15.49■□□□□ 0.07
VPS33B-202ENST00000535906 TDRD7Q8NHU6 1098 aaKnown RBP15.49■□□□□ 0.07
VPS33B-202ENST00000535906 KCNF1Q9H3M0 494 aa15.49■□□□□ 0.07
VPS33B-202ENST00000535906 AATFQ9NY61 560 aaKnown RBP eCLIP15.49■□□□□ 0.07
VPS33B-202ENST00000535906 PRDM1O75626 825 aa15.49■□□□□ 0.07
VPS33B-202ENST00000535906 WDHD1O75717 1129 aaPredicted RBP15.49■□□□□ 0.07
VPS33B-202ENST00000535906 MARCKSP29966 332 aaPredicted RBP15.49■□□□□ 0.07
VPS33B-202ENST00000535906 GNL2Q13823 731 aaKnown RBP15.49■□□□□ 0.07
VPS33B-202ENST00000535906 SLC39A14Q15043 492 aa15.49■□□□□ 0.07
VPS33B-202ENST00000535906 C11orf57Q6ZUT1 292 aaPredicted RBP15.49■□□□□ 0.07
VPS33B-202ENST00000535906 SPC24Q8NBT2 197 aa15.49■□□□□ 0.07
VPS33B-202ENST00000535906 NUP133Q8WUM0 1156 aa15.49■□□□□ 0.07
VPS33B-202ENST00000535906 USP17L12C9JPN9 530 aa15.48■□□□□ 0.07
VPS33B-202ENST00000535906 USP17L21D6R901 530 aa15.48■□□□□ 0.07
VPS33B-202ENST00000535906 CRACR2BQ8N4Y2 399 aaPredicted RBP15.48■□□□□ 0.07
VPS33B-202ENST00000535906 KIAA1524Q8TCG1 905 aa15.48■□□□□ 0.07
VPS33B-202ENST00000535906 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.48■□□□□ 0.07
VPS33B-202ENST00000535906 DUOX1Q9NRD9 1551 aa15.48■□□□□ 0.07
VPS33B-202ENST00000535906 DYNC1I1O14576 645 aa15.48■□□□□ 0.07
VPS33B-202ENST00000535906 ENAHQ8N8S7 591 aaPredicted RBP15.48■□□□□ 0.07
VPS33B-202ENST00000535906 MAP3K14Q99558 947 aa15.48■□□□□ 0.07
VPS33B-202ENST00000535906 FGRP09769 529 aa15.47■□□□□ 0.07
VPS33B-202ENST00000535906 GRAPQ13588 217 aa15.47■□□□□ 0.07
VPS33B-202ENST00000535906 IQCB1Q15051 598 aa15.47■□□□□ 0.07
VPS33B-202ENST00000535906 PTPAQ15257 358 aa15.47■□□□□ 0.07
VPS33B-202ENST00000535906 STX1AQ16623 288 aa15.47■□□□□ 0.07
VPS33B-202ENST00000535906 TRIM22Q8IYM9 498 aa15.47■□□□□ 0.07
VPS33B-202ENST00000535906 CNBD1Q8NA66 436 aa15.47■□□□□ 0.07
VPS33B-202ENST00000535906 GRAPLQ8TC17 118 aaPredicted RBP15.47■□□□□ 0.07
VPS33B-202ENST00000535906 ZSCAN10Q96SZ4 725 aaPredicted RBP15.47■□□□□ 0.07
VPS33B-202ENST00000535906 SDF4Q9BRK5 362 aa15.47■□□□□ 0.07
VPS33B-202ENST00000535906 BCL11BQ9C0K0 894 aaPredicted RBP15.47■□□□□ 0.07
VPS33B-202ENST00000535906 ANKIB1Q9P2G1 1089 aa15.47■□□□□ 0.07
VPS33B-202ENST00000535906 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.47■□□□□ 0.07
VPS33B-202ENST00000535906 CCDC196A0A1B0GTZ2 297 aa15.47■□□□□ 0.07
VPS33B-202ENST00000535906 RCAN1P53805 252 aa15.47■□□□□ 0.07
VPS33B-202ENST00000535906 PLA2G4DQ86XP0 818 aa15.47■□□□□ 0.07
VPS33B-202ENST00000535906 C17orf53Q8N3J3 647 aaPredicted RBP15.47■□□□□ 0.07
VPS33B-202ENST00000535906 WASF1Q92558 559 aa15.47■□□□□ 0.07
VPS33B-202ENST00000535906 PRIMPOLQ96LW4 560 aa15.47■□□□□ 0.07
VPS33B-202ENST00000535906 DCP1AQ9NPI6 582 aaPredicted RBP15.47■□□□□ 0.07
VPS33B-202ENST00000535906 KCNJ14Q9UNX9 436 aa15.47■□□□□ 0.07
VPS33B-202ENST00000535906 BTBD18B2RXH4 712 aa15.46■□□□□ 0.07
VPS33B-202ENST00000535906 MMP1P03956 469 aa15.46■□□□□ 0.07
VPS33B-202ENST00000535906 CMA1P23946 247 aa15.46■□□□□ 0.07
VPS33B-202ENST00000535906 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.46■□□□□ 0.07
VPS33B-202ENST00000535906 PDCL3Q9H2J4 239 aa15.46■□□□□ 0.07
VPS33B-202ENST00000535906 MROH7-TTC4A0A0A0MT08 1334 aa15.46■□□□□ 0.07
VPS33B-202ENST00000535906 ZNF202O95125 648 aa15.46■□□□□ 0.07
VPS33B-202ENST00000535906 PFKFB1P16118 471 aa15.46■□□□□ 0.07
VPS33B-202ENST00000535906 DEXIO95424 95 aa15.45■□□□□ 0.06
VPS33B-202ENST00000535906 HSPA1LP34931 641 aa15.45■□□□□ 0.06
VPS33B-202ENST00000535906 ZNF75DP51815 510 aa15.45■□□□□ 0.06
VPS33B-202ENST00000535906 PRR5LQ6MZQ0 368 aa15.45■□□□□ 0.06
VPS33B-202ENST00000535906 NOSTRINQ8IVI9 506 aa15.45■□□□□ 0.06
VPS33B-202ENST00000535906 MYRIPQ8NFW9 859 aa15.45■□□□□ 0.06
VPS33B-202ENST00000535906 CRNKL1Q9BZJ0 848 aaKnown RBP15.45■□□□□ 0.06
VPS33B-202ENST00000535906 TRPC5Q9UL62 973 aaPredicted RBP15.45■□□□□ 0.06
VPS33B-202ENST00000535906 PYCARDQ9ULZ3 195 aa15.45■□□□□ 0.06
VPS33B-202ENST00000535906 CCDC88AQ3V6T2 1871 aa15.45■□□□□ 0.06
VPS33B-202ENST00000535906 PPP6R2O75170 966 aa15.45■□□□□ 0.06
VPS33B-202ENST00000535906 DIS3L2Q8IYB7 885 aaKnown RBP15.45■□□□□ 0.06
VPS33B-202ENST00000535906 TRIM5Q9C035 493 aa15.45■□□□□ 0.06
VPS33B-202ENST00000535906 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.45■□□□□ 0.06
VPS33B-202ENST00000535906 PCP11498 1178 aaKnown RBP15.44■□□□□ 0.06
VPS33B-202ENST00000535906 IFIT1BQ5T764 474 aaKnown RBP15.44■□□□□ 0.06
VPS33B-202ENST00000535906 SHC4Q6S5L8 630 aa15.44■□□□□ 0.06
VPS33B-202ENST00000535906 IQCA1Q86XH1 822 aa15.44■□□□□ 0.06
VPS33B-202ENST00000535906 GPR101Q96P66 508 aaPredicted RBP15.44■□□□□ 0.06
VPS33B-202ENST00000535906 ATP8A2Q9NTI2 1148 aa15.44■□□□□ 0.06
VPS33B-202ENST00000535906 ANO10Q9NW15 660 aa15.44■□□□□ 0.06
VPS33B-202ENST00000535906 KIAA1468Q9P260 1216 aa15.44■□□□□ 0.06
VPS33B-202ENST00000535906 LEMD3Q9Y2U8 911 aa15.44■□□□□ 0.06
VPS33B-202ENST00000535906 CYP2D6P10635 497 aa15.44■□□□□ 0.06
VPS33B-202ENST00000535906 GYS1P13807 737 aa15.44■□□□□ 0.06
VPS33B-202ENST00000535906 ADRA2BP18089 450 aa15.44■□□□□ 0.06
VPS33B-202ENST00000535906 PTGS1P23219 599 aa15.44■□□□□ 0.06
VPS33B-202ENST00000535906 TOB1P50616 345 aaPredicted RBP15.44■□□□□ 0.06
VPS33B-202ENST00000535906 DZIP1Q86YF9 867 aaKnown RBP15.44■□□□□ 0.06
VPS33B-202ENST00000535906 FBXW7Q969H0 707 aa15.44■□□□□ 0.06
VPS33B-202ENST00000535906 CLIC6Q96NY7 704 aa15.44■□□□□ 0.06
VPS33B-202ENST00000535906 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.44■□□□□ 0.06
VPS33B-202ENST00000535906 UBR3Q6ZT12 1888 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 NMT2O60551 498 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 RBM10P98175 930 aaKnown RBP15.43■□□□□ 0.06
VPS33B-202ENST00000535906 TROAPQ12815 778 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 NR5A1Q13285 461 aa15.43■□□□□ 0.06
VPS33B-202ENST00000535906 SAFBQ15424 915 aaKnown RBP eCLIP15.43■□□□□ 0.06
VPS33B-202ENST00000535906 DHX40Q8IX18 779 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms