RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 NLRP12P59046 1061 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 CCDC186Q7Z3E2 898 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 MPNDQ8N594 471 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 ZNF579Q8NAF0 562 aaKnown RBP8.32□□□□□ -1.08
RNPC3-209ENST00000533834 DPF2Q92785 391 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 PHKBQ93100 1093 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 ARMT1Q9H993 441 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 CCDC9Q9Y3X0 531 aaKnown RBP8.32□□□□□ -1.08
RNPC3-209ENST00000533834 MYH4Q9Y623 1939 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 SPTLC2O15270 562 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 EDIL3O43854 480 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 MBD4O95243 580 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 TPM3P06753 285 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 E2F4Q16254 413 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 ERFEQ4G0M1 354 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 SLX4Q8IY92 1834 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 FNBP4Q8N3X1 1017 aaPredicted RBP8.32□□□□□ -1.08
RNPC3-209ENST00000533834 LRRC15Q8TF66 581 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 CNTNAP5Q8WYK1 1306 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 NAP1L5Q96NT1 182 aaPredicted RBP8.32□□□□□ -1.08
RNPC3-209ENST00000533834 MTRQ99707 1265 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 BRIP1Q9BX63 1249 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 ORC3Q9UBD5 711 aaPredicted RBP8.32□□□□□ -1.08
RNPC3-209ENST00000533834 MINPP1Q9UNW1 487 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 FOXN1O15353 648 aa8.31□□□□□ -1.08
RNPC3-209ENST00000533834 PTPREP23469 700 aa8.31□□□□□ -1.08
RNPC3-209ENST00000533834 NCBP1Q09161 790 aaKnown RBP8.31□□□□□ -1.08
RNPC3-209ENST00000533834 LONRF3Q496Y0 759 aa8.31□□□□□ -1.08
RNPC3-209ENST00000533834 RC3H1Q5TC82 1133 aaKnown RBP8.31□□□□□ -1.08
RNPC3-209ENST00000533834 TRIM65Q6PJ69 517 aa8.31□□□□□ -1.08
RNPC3-209ENST00000533834 MAGEB6Q8N7X4 407 aa8.31□□□□□ -1.08
RNPC3-209ENST00000533834 FSIP1Q8NA03 581 aa8.31□□□□□ -1.08
RNPC3-209ENST00000533834 HELBQ8NG08 1087 aaPredicted RBP8.31□□□□□ -1.08
RNPC3-209ENST00000533834 TSC1Q92574 1164 aa8.31□□□□□ -1.08
RNPC3-209ENST00000533834 ANKS1AQ92625 1134 aa8.31□□□□□ -1.08
RNPC3-209ENST00000533834 NSUN4Q96CB9 384 aaKnown RBP8.31□□□□□ -1.08
RNPC3-209ENST00000533834 UTP14AQ9BVJ6 771 aaKnown RBP8.31□□□□□ -1.08
RNPC3-209ENST00000533834 FOXP1Q9H334 677 aaPredicted RBP8.31□□□□□ -1.08
RNPC3-209ENST00000533834 L2HGDHQ9H9P8 463 aa8.31□□□□□ -1.08
RNPC3-209ENST00000533834 SCN9AQ15858 1988 aa8.31□□□□□ -1.08
RNPC3-209ENST00000533834 EXOC5O00471 708 aa8.31□□□□□ -1.08
RNPC3-209ENST00000533834 SF3A1Q15459 793 aaKnown RBP8.31□□□□□ -1.08
RNPC3-209ENST00000533834 NOM1Q5C9Z4 860 aaKnown RBP8.31□□□□□ -1.08
RNPC3-209ENST00000533834 C15orf52Q6ZUT6 534 aaKnown RBP8.31□□□□□ -1.08
RNPC3-209ENST00000533834 ENAHQ8N8S7 591 aaPredicted RBP8.31□□□□□ -1.08
RNPC3-209ENST00000533834 OXER1Q8TDS5 423 aa8.31□□□□□ -1.08
RNPC3-209ENST00000533834 ZNF396Q96N95 335 aaPredicted RBP8.31□□□□□ -1.08
RNPC3-209ENST00000533834 GOLGB1Q14789 3259 aaKnown RBP8.31□□□□□ -1.08
RNPC3-209ENST00000533834 LOC285556D6RIA3 1793 aa8.31□□□□□ -1.08
RNPC3-209ENST00000533834 RIOK3O14730 519 aaKnown RBP8.31□□□□□ -1.08
RNPC3-209ENST00000533834 ONECUT3O60422 494 aaPredicted RBP8.31□□□□□ -1.08
RNPC3-209ENST00000533834 MORC3Q14149 939 aa8.31□□□□□ -1.08
RNPC3-209ENST00000533834 TBC1D9BQ66K14 1250 aa8.31□□□□□ -1.08
RNPC3-209ENST00000533834 CTR9Q6PD62 1173 aa8.31□□□□□ -1.08
RNPC3-209ENST00000533834 C8orf76Q96K31 380 aa8.31□□□□□ -1.08
RNPC3-209ENST00000533834 VEGFAP15692 232 aaPredicted RBP8.3□□□□□ -1.08
RNPC3-209ENST00000533834 MYL10Q9BUA6 226 aa8.3□□□□□ -1.08
RNPC3-209ENST00000533834 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.3□□□□□ -1.08
RNPC3-209ENST00000533834 ORC4O43929 436 aa8.3□□□□□ -1.08
RNPC3-209ENST00000533834 PRR29P0C7W0 189 aa8.3□□□□□ -1.08
RNPC3-209ENST00000533834 RXRAP19793 462 aa8.3□□□□□ -1.08
RNPC3-209ENST00000533834 EVA1CP58658 441 aa8.3□□□□□ -1.08
RNPC3-209ENST00000533834 CUL4BQ13620 913 aa8.3□□□□□ -1.08
RNPC3-209ENST00000533834 RAB11FIP4Q86YS3 637 aa8.3□□□□□ -1.08
RNPC3-209ENST00000533834 CELF1Q92879 486 aaKnown RBP8.3□□□□□ -1.08
RNPC3-209ENST00000533834 CLIC6Q96NY7 704 aa8.3□□□□□ -1.08
RNPC3-209ENST00000533834 PARP14Q460N5 1801 aa8.3□□□□□ -1.08
RNPC3-209ENST00000533834 FAM205CA6NFA0 338 aa8.3□□□□□ -1.08
RNPC3-209ENST00000533834 SBK1Q52WX2 424 aa8.3□□□□□ -1.08
RNPC3-209ENST00000533834 NOSTRINQ8IVI9 506 aa8.3□□□□□ -1.08
RNPC3-209ENST00000533834 IMPACTQ9P2X3 320 aa8.3□□□□□ -1.08
RNPC3-209ENST00000533834 HSP90B1P14625 803 aaKnown RBP8.29□□□□□ -1.08
RNPC3-209ENST00000533834 METAP2P50579 478 aaKnown RBP eCLIP8.29□□□□□ -1.08
RNPC3-209ENST00000533834 FMR1Q06787 632 aaKnown RBP eCLIP8.29□□□□□ -1.08
RNPC3-209ENST00000533834 PPARAQ07869 468 aa8.29□□□□□ -1.08
RNPC3-209ENST00000533834 UBE4AQ14139 1066 aa8.29□□□□□ -1.08
RNPC3-209ENST00000533834 VPS72Q15906 364 aa8.29□□□□□ -1.08
RNPC3-209ENST00000533834 LRRFIP1Q32MZ4 808 aaKnown RBP8.29□□□□□ -1.08
RNPC3-209ENST00000533834 TXNRD3Q86VQ6 643 aa8.29□□□□□ -1.08
RNPC3-209ENST00000533834 POLR3DP05423 398 aaPredicted RBP8.29□□□□□ -1.08
RNPC3-209ENST00000533834 GNAT2P19087 354 aa8.29□□□□□ -1.08
RNPC3-209ENST00000533834 DPYDQ12882 1025 aa8.29□□□□□ -1.08
RNPC3-209ENST00000533834 KRBA2Q6ZNG9 492 aa8.29□□□□□ -1.08
RNPC3-209ENST00000533834 USP49Q70CQ1 688 aa8.29□□□□□ -1.08
RNPC3-209ENST00000533834 REXO1L1PQ8IX06 675 aa8.29□□□□□ -1.08
RNPC3-209ENST00000533834 ALG1Q9BT22 464 aa8.29□□□□□ -1.08
RNPC3-209ENST00000533834 IL17RBQ9NRM6 502 aa8.29□□□□□ -1.08
RNPC3-209ENST00000533834 ATP1A3P13637 1013 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 CEBPZQ03701 1054 aaKnown RBP8.28□□□□□ -1.08
RNPC3-209ENST00000533834 CCAR2Q8N163 923 aaKnown RBP8.28□□□□□ -1.08
RNPC3-209ENST00000533834 AOPEPQ8N6M6 819 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 PRDM4Q9UKN5 801 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 PCDHB6Q9Y5E3 794 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 SRPRBQ9Y5M8 271 aaKnown RBP8.28□□□□□ -1.08
RNPC3-209ENST00000533834 H3BQV1 296 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 CUTAO60888 179 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 GRIK5Q16478 980 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 WASHC4Q2M389 1173 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 IFFO2Q5TF58 517 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 SMIM5Q71RC9 77 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms