RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 CD209Q9NNX6 404 aa13.88□□□□□ -0.19
CLP1-205ENST00000533682 MCM9Q9NXL9 1143 aa13.88□□□□□ -0.19
CLP1-205ENST00000533682 USP25Q9UHP3 1055 aa13.88□□□□□ -0.19
CLP1-205ENST00000533682 KCNJ14Q9UNX9 436 aa13.88□□□□□ -0.19
CLP1-205ENST00000533682 CDKL5O76039 1030 aa13.88□□□□□ -0.19
CLP1-205ENST00000533682 SSRP1Q08945 709 aaKnown RBP13.88□□□□□ -0.19
CLP1-205ENST00000533682 SNW1Q13573 536 aaKnown RBP13.88□□□□□ -0.19
CLP1-205ENST00000533682 MSL1Q68DK7 614 aa13.88□□□□□ -0.19
CLP1-205ENST00000533682 CPLX2Q6PUV4 134 aaKnown RBP13.88□□□□□ -0.19
CLP1-205ENST00000533682 ZSCAN10Q96SZ4 725 aaPredicted RBP13.88□□□□□ -0.19
CLP1-205ENST00000533682 RTEL1Q9NZ71 1219 aa13.88□□□□□ -0.19
CLP1-205ENST00000533682 GGA1Q9UJY5 639 aa13.88□□□□□ -0.19
CLP1-205ENST00000533682 A0A1B0GVL5 298 aa13.87□□□□□ -0.19
CLP1-205ENST00000533682 C6orf229H3BNL8 230 aa13.87□□□□□ -0.19
CLP1-205ENST00000533682 IFNAR1P17181 557 aa13.87□□□□□ -0.19
CLP1-205ENST00000533682 RBM6P78332 1123 aaKnown RBP13.87□□□□□ -0.19
CLP1-205ENST00000533682 ZNF804AQ7Z570 1209 aa13.87□□□□□ -0.19
CLP1-205ENST00000533682 NBPF11Q86T75 865 aa13.87□□□□□ -0.19
CLP1-205ENST00000533682 TBC1D16Q8TBP0 767 aa13.87□□□□□ -0.19
CLP1-205ENST00000533682 CLSTN2Q9H4D0 955 aa13.87□□□□□ -0.19
CLP1-205ENST00000533682 RIMBP2O15034 1052 aa13.86□□□□□ -0.19
CLP1-205ENST00000533682 AP5Z1O43299 807 aa13.86□□□□□ -0.19
CLP1-205ENST00000533682 WDR66Q8TBY9 1149 aa13.86□□□□□ -0.19
CLP1-205ENST00000533682 DYNLL2Q96FJ2 89 aa13.86□□□□□ -0.19
CLP1-205ENST00000533682 MRVI1Q9Y6F6 885 aa13.86□□□□□ -0.19
CLP1-205ENST00000533682 DUOX1Q9NRD9 1551 aa13.86□□□□□ -0.19
CLP1-205ENST00000533682 A0A0U1RQG5 324 aaPredicted RBP13.86□□□□□ -0.19
CLP1-205ENST00000533682 FMNL1O95466 1100 aaPredicted RBP13.86□□□□□ -0.19
CLP1-205ENST00000533682 FGRP09769 529 aa13.86□□□□□ -0.19
CLP1-205ENST00000533682 MARCKSP29966 332 aaPredicted RBP13.86□□□□□ -0.19
CLP1-205ENST00000533682 HOXA10P31260 410 aaPredicted RBP13.86□□□□□ -0.19
CLP1-205ENST00000533682 PLCB2Q00722 1185 aa13.86□□□□□ -0.19
CLP1-205ENST00000533682 TYRO3Q06418 890 aa13.86□□□□□ -0.19
CLP1-205ENST00000533682 STK38Q15208 465 aa13.86□□□□□ -0.19
CLP1-205ENST00000533682 CRACR2BQ8N4Y2 399 aaPredicted RBP13.86□□□□□ -0.19
CLP1-205ENST00000533682 BTBD18B2RXH4 712 aa13.85□□□□□ -0.19
CLP1-205ENST00000533682 BBOX1O75936 387 aa13.85□□□□□ -0.19
CLP1-205ENST00000533682 CCDC192P0DO97 292 aa13.85□□□□□ -0.19
CLP1-205ENST00000533682 IFIT1BQ5T764 474 aaKnown RBP13.85□□□□□ -0.19
CLP1-205ENST00000533682 SPTY2D1Q68D10 685 aaPredicted RBP13.85□□□□□ -0.19
CLP1-205ENST00000533682 FSIP1Q8NA03 581 aa13.85□□□□□ -0.19
CLP1-205ENST00000533682 TGFBRAP1Q8WUH2 860 aa13.85□□□□□ -0.19
CLP1-205ENST00000533682 AKT1S1Q96B36 256 aa13.85□□□□□ -0.19
CLP1-205ENST00000533682 SHISA4Q96DD7 197 aa13.85□□□□□ -0.19
CLP1-205ENST00000533682 ATP8A2Q9NTI2 1148 aa13.85□□□□□ -0.19
CLP1-205ENST00000533682 DDX19AQ9NUU7 478 aaKnown RBP13.85□□□□□ -0.19
CLP1-205ENST00000533682 MKRN1Q9UHC7 482 aaKnown RBP13.85□□□□□ -0.19
CLP1-205ENST00000533682 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.85□□□□□ -0.19
CLP1-205ENST00000533682 MYH6P13533 1939 aa13.85□□□□□ -0.19
CLP1-205ENST00000533682 PLEKHA8P1O95397 391 aa13.85□□□□□ -0.19
CLP1-205ENST00000533682 USP5P45974 858 aa13.85□□□□□ -0.19
CLP1-205ENST00000533682 SF3A1Q15459 793 aaKnown RBP13.85□□□□□ -0.19
CLP1-205ENST00000533682 BRAPQ7Z569 592 aa13.85□□□□□ -0.19
CLP1-205ENST00000533682 TMTC2Q8N394 836 aa13.85□□□□□ -0.19
CLP1-205ENST00000533682 ENGASEQ8NFI3 743 aa13.85□□□□□ -0.19
CLP1-205ENST00000533682 SAP30BPQ9UHR5 308 aaKnown RBP13.85□□□□□ -0.19
CLP1-205ENST00000533682 ANKRD31Q8N7Z5 1873 aa13.85□□□□□ -0.19
CLP1-205ENST00000533682 SRCAPQ6ZRS2 3230 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 KLRG2A4D1S0 409 aaPredicted RBP13.84□□□□□ -0.19
CLP1-205ENST00000533682 ATP2B4P23634 1241 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 NDUFA8P51970 172 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 GNL2Q13823 731 aaKnown RBP13.84□□□□□ -0.19
CLP1-205ENST00000533682 ANO1Q5XXA6 986 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 ATL3Q6DD88 541 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 LUZP1Q86V48 1076 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 SLC44A5Q8NCS7 719 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 POLR3EQ9NVU0 708 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 SPTLC2O15270 562 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 WDHD1O75717 1129 aaPredicted RBP13.84□□□□□ -0.19
CLP1-205ENST00000533682 MMP10P09238 476 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 PLCD1P51178 756 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 TROAPQ12815 778 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 NR5A1Q13285 461 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 ANO6Q4KMQ2 910 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 MFSD14BQ5SR56 506 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 IQCA1Q86XH1 822 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 MAPKAPK5Q8IW41 473 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 OXER1Q8TDS5 423 aa13.84□□□□□ -0.19
CLP1-205ENST00000533682 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.84□□□□□ -0.19
CLP1-205ENST00000533682 PLSCR1O15162 318 aa13.83□□□□□ -0.19
CLP1-205ENST00000533682 ADALQ6DHV7 355 aa13.83□□□□□ -0.19
CLP1-205ENST00000533682 RBM43Q6ZSC3 357 aaKnown RBP13.83□□□□□ -0.19
CLP1-205ENST00000533682 C15orf52Q6ZUT6 534 aaKnown RBP13.83□□□□□ -0.19
CLP1-205ENST00000533682 PIBF1Q8WXW3 757 aa13.83□□□□□ -0.19
CLP1-205ENST00000533682 CRAMP1Q96RY5 1269 aa13.83□□□□□ -0.19
CLP1-205ENST00000533682 MXD3Q9BW11 206 aa13.83□□□□□ -0.19
CLP1-205ENST00000533682 RTFDC1Q9BY42 306 aaPredicted RBP13.83□□□□□ -0.19
CLP1-205ENST00000533682 PPEF1O14829 653 aaPredicted RBP13.83□□□□□ -0.2
CLP1-205ENST00000533682 SRGNP10124 158 aa13.83□□□□□ -0.2
CLP1-205ENST00000533682 IL1R1P14778 569 aa13.83□□□□□ -0.2
CLP1-205ENST00000533682 U2AF2P26368 475 aaKnown RBP eCLIP13.83□□□□□ -0.2
CLP1-205ENST00000533682 TRIM29Q14134 588 aa13.83□□□□□ -0.2
CLP1-205ENST00000533682 KIAA1551Q9HCM1 1747 aa13.83□□□□□ -0.2
CLP1-205ENST00000533682 TSPY2A6NKD2 308 aa13.82□□□□□ -0.2
CLP1-205ENST00000533682 ADCY5O95622 1261 aa13.82□□□□□ -0.2
CLP1-205ENST00000533682 VEGFAP15692 232 aaPredicted RBP13.82□□□□□ -0.2
CLP1-205ENST00000533682 GTF2IP78347 998 aa13.82□□□□□ -0.2
CLP1-205ENST00000533682 FAM160A1Q05DH4 1040 aa13.82□□□□□ -0.2
CLP1-205ENST00000533682 FUT2Q10981 343 aa13.82□□□□□ -0.2
CLP1-205ENST00000533682 AXDND1Q5T1B0 1012 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms