RNA–Protein interactions for RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 SH3RF1Q7Z6J0 888 aa6.7□□□□□ -1.34
RDX-213ENST00000532461 LCORLQ8N3X6 602 aa6.7□□□□□ -1.34
RDX-213ENST00000532461 MAGEB6Q8N7X4 407 aa6.7□□□□□ -1.34
RDX-213ENST00000532461 NACAP1Q9BZK3 213 aa6.7□□□□□ -1.34
RDX-213ENST00000532461 FAM53CQ9NYF3 392 aa6.7□□□□□ -1.34
RDX-213ENST00000532461 MYH8P13535 1937 aa6.69□□□□□ -1.34
RDX-213ENST00000532461 B4E1Z4 1266 aa6.69□□□□□ -1.34
RDX-213ENST00000532461 MBD4O95243 580 aa6.69□□□□□ -1.34
RDX-213ENST00000532461 SLC3A2P08195 630 aaKnown RBP6.69□□□□□ -1.34
RDX-213ENST00000532461 ZNF18P17022 549 aa6.69□□□□□ -1.34
RDX-213ENST00000532461 CHRNDQ07001 517 aa6.69□□□□□ -1.34
RDX-213ENST00000532461 SSRP1Q08945 709 aaKnown RBP6.69□□□□□ -1.34
RDX-213ENST00000532461 SEMA3FQ13275 785 aa6.69□□□□□ -1.34
RDX-213ENST00000532461 SYNE3Q6ZMZ3 975 aa6.69□□□□□ -1.34
RDX-213ENST00000532461 KRBA2Q6ZNG9 492 aa6.69□□□□□ -1.34
RDX-213ENST00000532461 MFSD6Q6ZSS7 791 aa6.69□□□□□ -1.34
RDX-213ENST00000532461 METTL16Q86W50 562 aaKnown RBP6.69□□□□□ -1.34
RDX-213ENST00000532461 ZNF384Q8TF68 577 aa6.69□□□□□ -1.34
RDX-213ENST00000532461 PHF20Q9BVI0 1012 aa6.69□□□□□ -1.34
RDX-213ENST00000532461 L2HGDHQ9H9P8 463 aa6.69□□□□□ -1.34
RDX-213ENST00000532461 ZNF652Q9Y2D9 606 aa6.69□□□□□ -1.34
RDX-213ENST00000532461 SRPRBQ9Y5M8 271 aaKnown RBP6.69□□□□□ -1.34
RDX-213ENST00000532461 PRPF3O43395 683 aaKnown RBP6.69□□□□□ -1.34
RDX-213ENST00000532461 TMEM67Q5HYA8 995 aa6.69□□□□□ -1.34
RDX-213ENST00000532461 ADGRA1Q86SQ6 560 aa6.69□□□□□ -1.34
RDX-213ENST00000532461 CCAR2Q8N163 923 aaKnown RBP6.69□□□□□ -1.34
RDX-213ENST00000532461 SHISA4Q96DD7 197 aa6.69□□□□□ -1.34
RDX-213ENST00000532461 CCDC94Q9BW85 323 aaPredicted RBP6.69□□□□□ -1.34
RDX-213ENST00000532461 NAPBQ9H115 298 aa6.69□□□□□ -1.34
RDX-213ENST00000532461 DDAH1O94760 285 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 IGHMBP2P38935 993 aaKnown RBP6.68□□□□□ -1.34
RDX-213ENST00000532461 PPARAQ07869 468 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 LRMPQ12912 555 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 MORC3Q14149 939 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 NPY5RQ15761 445 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 PKN1Q16512 942 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 DDB1Q16531 1140 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 CCDC93Q567U6 631 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 C17orf53Q8N3J3 647 aaPredicted RBP6.68□□□□□ -1.34
RDX-213ENST00000532461 KRI1Q8N9T8 703 aaKnown RBP6.68□□□□□ -1.34
RDX-213ENST00000532461 RBM28Q9NW13 759 aaKnown RBP6.68□□□□□ -1.34
RDX-213ENST00000532461 AATFQ9NY61 560 aaKnown RBP eCLIP6.68□□□□□ -1.34
RDX-213ENST00000532461 MKRN1Q9UHC7 482 aaKnown RBP6.68□□□□□ -1.34
RDX-213ENST00000532461 SLC12A7Q9Y666 1083 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 GOLGA8AA7E2F4 631 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 RIOK3O14730 519 aaKnown RBP6.68□□□□□ -1.34
RDX-213ENST00000532461 IDH1O75874 414 aaKnown RBP6.68□□□□□ -1.34
RDX-213ENST00000532461 CALM1P0DP23 149 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 CALM2P0DP24 149 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 CALM3P0DP25 149 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 FECHP22830 423 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 SYKP43405 635 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 OTUD7BQ6GQQ9 843 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 FOXP4Q8IVH2 680 aaPredicted RBP6.68□□□□□ -1.34
RDX-213ENST00000532461 AOPEPQ8N6M6 819 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 FANCBQ8NB91 859 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 ARMT1Q9H993 441 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 BCL2L12Q9HB09 334 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 SEC31BQ9NQW1 1179 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 RGPD3A6NKT7 1758 aaPredicted RBP6.68□□□□□ -1.34
RDX-213ENST00000532461 RGPD4Q7Z3J3 1758 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 ACTN4O43707 911 aaKnown RBP6.68□□□□□ -1.34
RDX-213ENST00000532461 BMP15O95972 392 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 BMP6P22004 513 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 ATP6V1AP38606 617 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 GUCY1B3Q02153 619 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 SART3Q15020 963 aaKnown RBP6.68□□□□□ -1.34
RDX-213ENST00000532461 KANK3Q6NY19 840 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 ARMCX5Q6P1M9 558 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 SPC24Q8NBT2 197 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 MPHOSPH8Q99549 860 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 GJB4Q9NTQ9 266 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 ANKRD31Q8N7Z5 1873 aa6.68□□□□□ -1.34
RDX-213ENST00000532461 CCDC69A6NI79 296 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 POLR3DP05423 398 aaPredicted RBP6.67□□□□□ -1.34
RDX-213ENST00000532461 BCAMP50895 628 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 CEBPZQ03701 1054 aaKnown RBP6.67□□□□□ -1.34
RDX-213ENST00000532461 CTDSPL2Q05D32 466 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 TROAPQ12815 778 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 WTAPQ15007 396 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 RTN1Q16799 776 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 TMEM139Q8IV31 216 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 ZNF654Q8IZM8 581 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 CCDC112Q8NEF3 446 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 ENOX1Q8TC92 643 aaKnown RBP6.67□□□□□ -1.34
RDX-213ENST00000532461 AIFM3Q96NN9 605 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 CEP131Q9UPN4 1083 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 IQSEC3Q9UPP2 1182 aaPredicted RBP6.67□□□□□ -1.34
RDX-213ENST00000532461 CCDC9Q9Y3X0 531 aaKnown RBP6.67□□□□□ -1.34
RDX-213ENST00000532461 ARFGEF1Q9Y6D6 1849 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 IFIT3O14879 490 aaKnown RBP6.67□□□□□ -1.34
RDX-213ENST00000532461 ERCC5P28715 1186 aaPredicted RBP6.67□□□□□ -1.34
RDX-213ENST00000532461 NOVP48745 357 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 MYL5Q02045 173 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 CHAF1AQ13111 956 aaPredicted RBP6.67□□□□□ -1.34
RDX-213ENST00000532461 VSTM4Q8IW00 320 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 MLKLQ8NB16 471 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 PHKBQ93100 1093 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 SDF4Q9BRK5 362 aa6.67□□□□□ -1.34
RDX-213ENST00000532461 SH3GLB2Q9NR46 395 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms