RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 LCORLQ8N3X6 602 aa11.69□□□□□ -0.54
CTNND1-228ENST00000531007 FBXL16Q8N461 479 aa11.69□□□□□ -0.54
CTNND1-228ENST00000531007 SYT17Q9BSW7 474 aa11.69□□□□□ -0.54
CTNND1-228ENST00000531007 MTA3Q9BTC8 594 aa11.69□□□□□ -0.54
CTNND1-228ENST00000531007 TAOK3Q9H2K8 898 aa11.69□□□□□ -0.54
CTNND1-228ENST00000531007 RNF41Q9H4P4 317 aaPredicted RBP11.69□□□□□ -0.54
CTNND1-228ENST00000531007 CNNM2Q9H8M5 875 aa11.69□□□□□ -0.54
CTNND1-228ENST00000531007 ARMT1Q9H993 441 aa11.69□□□□□ -0.54
CTNND1-228ENST00000531007 ANAPC4Q9UJX5 808 aa11.69□□□□□ -0.54
CTNND1-228ENST00000531007 VPS9D1Q9Y2B5 631 aa11.69□□□□□ -0.54
CTNND1-228ENST00000531007 PPP1R3GB7ZBB8 358 aa11.68□□□□□ -0.54
CTNND1-228ENST00000531007 SLC3A2P08195 630 aaKnown RBP11.68□□□□□ -0.54
CTNND1-228ENST00000531007 RPS6KB1P23443 525 aa11.68□□□□□ -0.54
CTNND1-228ENST00000531007 IARSP41252 1262 aaKnown RBP11.68□□□□□ -0.54
CTNND1-228ENST00000531007 TDO2P48775 406 aa11.68□□□□□ -0.54
CTNND1-228ENST00000531007 AOC3Q16853 763 aa11.68□□□□□ -0.54
CTNND1-228ENST00000531007 SLFNL1Q499Z3 407 aa11.68□□□□□ -0.54
CTNND1-228ENST00000531007 DACT2Q5SW24 774 aa11.68□□□□□ -0.54
CTNND1-228ENST00000531007 DHX32Q7L7V1 743 aaKnown RBP11.68□□□□□ -0.54
CTNND1-228ENST00000531007 NIM1KQ8IY84 436 aa11.68□□□□□ -0.54
CTNND1-228ENST00000531007 LARGE2Q8N3Y3 721 aa11.68□□□□□ -0.54
CTNND1-228ENST00000531007 NCOA7Q8NI08 942 aa11.68□□□□□ -0.54
CTNND1-228ENST00000531007 ZNF384Q8TF68 577 aa11.68□□□□□ -0.54
CTNND1-228ENST00000531007 JDP2Q8WYK2 163 aa11.68□□□□□ -0.54
CTNND1-228ENST00000531007 ZSCAN31Q96LW9 406 aaPredicted RBP11.68□□□□□ -0.54
CTNND1-228ENST00000531007 ZBED2Q9BTP6 218 aa11.68□□□□□ -0.54
CTNND1-228ENST00000531007 PDRG1Q9NUG6 133 aa11.68□□□□□ -0.54
CTNND1-228ENST00000531007 ARPP21Q9UBL0 812 aaPredicted RBP11.68□□□□□ -0.54
CTNND1-228ENST00000531007 ZNRF3Q9ULT6 936 aa11.68□□□□□ -0.54
CTNND1-228ENST00000531007 E7EWF7 191 aa11.67□□□□□ -0.54
CTNND1-228ENST00000531007 NBR1Q14596 966 aa11.67□□□□□ -0.54
CTNND1-228ENST00000531007 SBK1Q52WX2 424 aa11.67□□□□□ -0.54
CTNND1-228ENST00000531007 RALYLQ86SE5 291 aaKnown RBP11.67□□□□□ -0.54
CTNND1-228ENST00000531007 ADGRA1Q86SQ6 560 aa11.67□□□□□ -0.54
CTNND1-228ENST00000531007 SLC51AQ86UW1 340 aa11.67□□□□□ -0.54
CTNND1-228ENST00000531007 MIGA1Q8NAN2 632 aa11.67□□□□□ -0.54
CTNND1-228ENST00000531007 TEKT1Q969V4 418 aa11.67□□□□□ -0.54
CTNND1-228ENST00000531007 TTC14Q96N46 770 aa11.67□□□□□ -0.54
CTNND1-228ENST00000531007 KRT23Q9C075 422 aa11.67□□□□□ -0.54
CTNND1-228ENST00000531007 DBNDD1Q9H9R9 158 aa11.67□□□□□ -0.54
CTNND1-228ENST00000531007 SH2B1Q9NRF2 756 aaPredicted RBP11.67□□□□□ -0.54
CTNND1-228ENST00000531007 AATFQ9NY61 560 aaKnown RBP eCLIP11.67□□□□□ -0.54
CTNND1-228ENST00000531007 LIMCH1Q9UPQ0 1083 aa11.67□□□□□ -0.54
CTNND1-228ENST00000531007 LAMA4Q16363 1823 aa11.67□□□□□ -0.54
CTNND1-228ENST00000531007 ARFGEF1Q9Y6D6 1849 aa11.67□□□□□ -0.54
CTNND1-228ENST00000531007 FER1L6Q2WGJ9 1857 aa11.66□□□□□ -0.54
CTNND1-228ENST00000531007 HSP90AA1P07900 732 aaKnown RBP11.66□□□□□ -0.54
CTNND1-228ENST00000531007 TNIP1Q15025 636 aa11.66□□□□□ -0.54
CTNND1-228ENST00000531007 ADCK5Q3MIX3 580 aa11.66□□□□□ -0.54
CTNND1-228ENST00000531007 AGBL3Q8NEM8 1001 aa11.66□□□□□ -0.54
CTNND1-228ENST00000531007 INTS4Q96HW7 963 aaKnown RBP11.66□□□□□ -0.54
CTNND1-228ENST00000531007 ZNF287Q9HBT7 754 aa11.66□□□□□ -0.54
CTNND1-228ENST00000531007 CWC22Q9HCG8 908 aaKnown RBP11.66□□□□□ -0.54
CTNND1-228ENST00000531007 SERPINA10Q9UK55 444 aa11.66□□□□□ -0.54
CTNND1-228ENST00000531007 TTF2Q9UNY4 1162 aaKnown RBP11.66□□□□□ -0.54
CTNND1-228ENST00000531007 BCS1LQ9Y276 419 aa11.66□□□□□ -0.54
CTNND1-228ENST00000531007 PSME4Q14997 1843 aa11.65□□□□□ -0.54
CTNND1-228ENST00000531007 VIL1P09327 827 aaKnown RBP11.65□□□□□ -0.54
CTNND1-228ENST00000531007 PDIA4P13667 645 aaKnown RBP11.65□□□□□ -0.54
CTNND1-228ENST00000531007 MCM5P33992 734 aa11.65□□□□□ -0.54
CTNND1-228ENST00000531007 BTDP43251 543 aa11.65□□□□□ -0.54
CTNND1-228ENST00000531007 USP5P45974 858 aa11.65□□□□□ -0.54
CTNND1-228ENST00000531007 C6orf132Q5T0Z8 1188 aa11.65□□□□□ -0.54
CTNND1-228ENST00000531007 AKNAD1Q5T1N1 836 aa11.65□□□□□ -0.54
CTNND1-228ENST00000531007 RSBN1LQ6PCB5 846 aaPredicted RBP11.65□□□□□ -0.54
CTNND1-228ENST00000531007 MFSD6Q6ZSS7 791 aa11.65□□□□□ -0.54
CTNND1-228ENST00000531007 CERS5Q8N5B7 392 aa11.65□□□□□ -0.54
CTNND1-228ENST00000531007 KCNV2Q8TDN2 545 aa11.65□□□□□ -0.54
CTNND1-228ENST00000531007 STAG1Q8WVM7 1258 aa11.65□□□□□ -0.54
CTNND1-228ENST00000531007 ZDHHC15Q96MV8 337 aa11.65□□□□□ -0.54
CTNND1-228ENST00000531007 UPF3BQ9BZI7 483 aaKnown RBP11.65□□□□□ -0.54
CTNND1-228ENST00000531007 EPB41L4AQ9HCS5 686 aaPredicted RBP11.65□□□□□ -0.54
CTNND1-228ENST00000531007 HDAC9Q9UKV0 1011 aa11.65□□□□□ -0.54
CTNND1-228ENST00000531007 TIAM2Q8IVF5 1701 aa11.65□□□□□ -0.54
CTNND1-228ENST00000531007 MYH2Q9UKX2 1941 aa11.64□□□□□ -0.55
CTNND1-228ENST00000531007 FGRP09769 529 aa11.64□□□□□ -0.55
CTNND1-228ENST00000531007 RPS12P25398 132 aaKnown RBP11.64□□□□□ -0.55
CTNND1-228ENST00000531007 DYNLL1P63167 89 aaKnown RBP11.64□□□□□ -0.55
CTNND1-228ENST00000531007 EXOSC10Q01780 885 aaKnown RBP11.64□□□□□ -0.55
CTNND1-228ENST00000531007 PDE4BQ07343 736 aa11.64□□□□□ -0.55
CTNND1-228ENST00000531007 PPARAQ07869 468 aa11.64□□□□□ -0.55
CTNND1-228ENST00000531007 AGXT2Q9BYV1 514 aa11.64□□□□□ -0.55
CTNND1-228ENST00000531007 DCP1AQ9NPI6 582 aaPredicted RBP11.64□□□□□ -0.55
CTNND1-228ENST00000531007 ZNF277Q9NRM2 450 aaPredicted RBP11.64□□□□□ -0.55
CTNND1-228ENST00000531007 MKRN1Q9UHC7 482 aaKnown RBP11.64□□□□□ -0.55
CTNND1-228ENST00000531007 JAG2Q9Y219 1238 aa11.64□□□□□ -0.55
CTNND1-228ENST00000531007 CHD4Q14839 1912 aa11.64□□□□□ -0.55
CTNND1-228ENST00000531007 PRKAB2O43741 272 aa11.63□□□□□ -0.55
CTNND1-228ENST00000531007 CRKP46108 304 aa11.63□□□□□ -0.55
CTNND1-228ENST00000531007 AK2P54819 239 aa11.63□□□□□ -0.55
CTNND1-228ENST00000531007 RHBDL3P58872 404 aa11.63□□□□□ -0.55
CTNND1-228ENST00000531007 CUL4AQ13619 759 aa11.63□□□□□ -0.55
CTNND1-228ENST00000531007 SART3Q15020 963 aaKnown RBP11.63□□□□□ -0.55
CTNND1-228ENST00000531007 DIXDC1Q155Q3 683 aa11.63□□□□□ -0.55
CTNND1-228ENST00000531007 TEX11Q8IYF3 940 aa11.63□□□□□ -0.55
CTNND1-228ENST00000531007 TMTC2Q8N394 836 aa11.63□□□□□ -0.55
CTNND1-228ENST00000531007 OGFOD1Q8N543 542 aa11.63□□□□□ -0.55
CTNND1-228ENST00000531007 SDR42E1Q8WUS8 393 aa11.63□□□□□ -0.55
CTNND1-228ENST00000531007 TMEM87BQ96K49 555 aa11.63□□□□□ -0.55
CTNND1-228ENST00000531007 DAGLAQ9Y4D2 1042 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms