RNA–Protein interactions for RNA: ENST00000529199.1

CTSF-206, Transcript of cathepsin F, humanhuman

TSL 4

Gene CTSF, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-206ENST00000529199 U2AF1L4Q8WU68 220 aaKnown RBP24.52■■□□□ 1.52
CTSF-206ENST00000529199 NOL10Q9BSC4 688 aaKnown RBP24.52■■□□□ 1.52
CTSF-206ENST00000529199 HTATIP2Q9BUP3 242 aa24.52■■□□□ 1.52
CTSF-206ENST00000529199 OSBPL5Q9H0X9 879 aaPredicted RBP24.52■■□□□ 1.52
CTSF-206ENST00000529199 MAP4K4O95819 1239 aaPredicted RBP24.51■■□□□ 1.51
CTSF-206ENST00000529199 INHAP05111 366 aa24.51■■□□□ 1.51
CTSF-206ENST00000529199 MCAMP43121 646 aa24.51■■□□□ 1.51
CTSF-206ENST00000529199 COA7Q96BR5 231 aa24.51■■□□□ 1.51
CTSF-206ENST00000529199 SNRKQ9NRH2 765 aa24.51■■□□□ 1.51
CTSF-206ENST00000529199 PNMA3Q9UL41 463 aa24.51■■□□□ 1.51
CTSF-206ENST00000529199 FARP2O94887 1054 aaPredicted RBP24.5■■□□□ 1.51
CTSF-206ENST00000529199 SGPL1O95470 568 aa24.5■■□□□ 1.51
CTSF-206ENST00000529199 TFRCP02786 760 aaKnown RBP24.5■■□□□ 1.51
CTSF-206ENST00000529199 UQCRFS1P1P0C7P4 283 aa24.5■■□□□ 1.51
CTSF-206ENST00000529199 ZNF280CQ8ND82 737 aa24.5■■□□□ 1.51
CTSF-206ENST00000529199 SH3RF3Q8TEJ3 882 aaPredicted RBP24.5■■□□□ 1.51
CTSF-206ENST00000529199 TRIOBPQ9H2D6 2365 aa24.49■■□□□ 1.51
CTSF-206ENST00000529199 CCER2I3L3R5 266 aa24.49■■□□□ 1.51
CTSF-206ENST00000529199 HMGCS2P54868 508 aa24.49■■□□□ 1.51
CTSF-206ENST00000529199 UBE2Q1Q7Z7E8 422 aa24.49■■□□□ 1.51
CTSF-206ENST00000529199 PROCA1Q8NCQ7 364 aaPredicted RBP24.49■■□□□ 1.51
CTSF-206ENST00000529199 PXYLP1Q8TE99 480 aa24.49■■□□□ 1.51
CTSF-206ENST00000529199 CAP2P40123 477 aa24.48■■□□□ 1.51
CTSF-206ENST00000529199 OS9Q13438 667 aaPredicted RBP24.48■■□□□ 1.51
CTSF-206ENST00000529199 IRF5Q13568 498 aa24.48■■□□□ 1.51
CTSF-206ENST00000529199 RRP1BQ14684 758 aaKnown RBP24.48■■□□□ 1.51
CTSF-206ENST00000529199 TTC39AQ5SRH9 613 aa24.48■■□□□ 1.51
CTSF-206ENST00000529199 DEFB118Q96PH6 123 aa24.48■■□□□ 1.51
CTSF-206ENST00000529199 USP17L5A8MUK1 530 aa24.47■■□□□ 1.51
CTSF-206ENST00000529199 PABPC4Q13310 644 aaKnown RBP eCLIP24.47■■□□□ 1.51
CTSF-206ENST00000529199 NAA16Q6N069 864 aaPredicted RBP24.47■■□□□ 1.51
CTSF-206ENST00000529199 AATFQ9NY61 560 aaKnown RBP eCLIP24.47■■□□□ 1.51
CTSF-206ENST00000529199 NR2E3Q9Y5X4 410 aa24.47■■□□□ 1.51
CTSF-206ENST00000529199 BAG3O95817 575 aa24.46■■□□□ 1.51
CTSF-206ENST00000529199 FAM110CQ1W6H9 321 aa24.46■■□□□ 1.51
CTSF-206ENST00000529199 CCDC158Q5M9N0 1113 aa24.46■■□□□ 1.51
CTSF-206ENST00000529199 RBM27Q9P2N5 1060 aaKnown RBP24.46■■□□□ 1.51
CTSF-206ENST00000529199 PI4KBQ9UBF8 816 aa24.46■■□□□ 1.51
CTSF-206ENST00000529199 HERC5Q9UII4 1024 aaKnown RBP24.46■■□□□ 1.51
CTSF-206ENST00000529199 DOCK1Q14185 1865 aa24.45■■□□□ 1.51
CTSF-206ENST00000529199 GCLCP48506 637 aaPredicted RBP24.45■■□□□ 1.5
CTSF-206ENST00000529199 TMEM57Q8N5G2 664 aa24.45■■□□□ 1.5
CTSF-206ENST00000529199 TGFBRAP1Q8WUH2 860 aa24.45■■□□□ 1.5
CTSF-206ENST00000529199 TBC1D2Q9BYX2 928 aa24.45■■□□□ 1.5
CTSF-206ENST00000529199 ASCC2Q9H1I8 757 aaPredicted RBP24.45■■□□□ 1.5
CTSF-206ENST00000529199 AS3MTQ9HBK9 375 aa24.45■■□□□ 1.5
CTSF-206ENST00000529199 MAPKAPK5Q8IW41 473 aa24.44■■□□□ 1.5
CTSF-206ENST00000529199 DBNDD2Q9BQY9 259 aa24.44■■□□□ 1.5
CTSF-206ENST00000529199 DHX36Q9H2U1 1008 aaKnown RBP24.44■■□□□ 1.5
CTSF-206ENST00000529199 MGAMO43451 1857 aa24.44■■□□□ 1.5
CTSF-206ENST00000529199 SURF6O75683 361 aaKnown RBP24.43■■□□□ 1.5
CTSF-206ENST00000529199 PLCG2P16885 1265 aa24.43■■□□□ 1.5
CTSF-206ENST00000529199 TNNI3KQ59H18 835 aa24.43■■□□□ 1.5
CTSF-206ENST00000529199 ZKSCAN2Q63HK3 967 aa24.43■■□□□ 1.5
CTSF-206ENST00000529199 TRIM34Q9BYJ4 488 aa24.43■■□□□ 1.5
CTSF-206ENST00000529199 FPGT-TNNI3KV9GXZ4 949 aa24.43■■□□□ 1.5
CTSF-206ENST00000529199 CRACR2BQ8N4Y2 399 aaPredicted RBP24.42■■□□□ 1.5
CTSF-206ENST00000529199 GPR108Q9NPR9 543 aa24.42■■□□□ 1.5
CTSF-206ENST00000529199 COL2A1P02458 1487 aaPredicted RBP24.42■■□□□ 1.5
CTSF-206ENST00000529199 PHIPQ8WWQ0 1821 aa24.42■■□□□ 1.5
CTSF-206ENST00000529199 EVI5O60447 810 aa24.41■■□□□ 1.5
CTSF-206ENST00000529199 CYP2E1P05181 493 aaPredicted RBP24.41■■□□□ 1.5
CTSF-206ENST00000529199 ATP8B2P98198 1209 aa24.41■■□□□ 1.5
CTSF-206ENST00000529199 MTMR2Q13614 643 aa24.41■■□□□ 1.5
CTSF-206ENST00000529199 POLA2Q14181 598 aa24.41■■□□□ 1.5
CTSF-206ENST00000529199 SH3D19Q5HYK7 790 aa24.41■■□□□ 1.5
CTSF-206ENST00000529199 C1orf115Q9H7X2 142 aa24.41■■□□□ 1.5
CTSF-206ENST00000529199 PAK6Q9NQU5 681 aaPredicted RBP24.41■■□□□ 1.5
CTSF-206ENST00000529199 TMOD4Q9NZQ9 345 aa24.41■■□□□ 1.5
CTSF-206ENST00000529199 RANBP2P49792 3224 aaKnown RBP24.4■■□□□ 1.5
CTSF-206ENST00000529199 PTPRFP10586 1907 aa24.4■■□□□ 1.5
CTSF-206ENST00000529199 ZBTB7BO15156 539 aaPredicted RBP24.4■■□□□ 1.5
CTSF-206ENST00000529199 PPP4CP60510 307 aa24.4■■□□□ 1.5
CTSF-206ENST00000529199 IRX3P78415 501 aaPredicted RBP24.4■■□□□ 1.5
CTSF-206ENST00000529199 ADGRA1Q86SQ6 560 aa24.4■■□□□ 1.5
CTSF-206ENST00000529199 WDR18Q9BV38 432 aa24.4■■□□□ 1.5
CTSF-206ENST00000529199 SAP30BPQ9UHR5 308 aaKnown RBP24.4■■□□□ 1.5
CTSF-206ENST00000529199 PALD1Q9ULE6 856 aa24.4■■□□□ 1.5
CTSF-206ENST00000529199 GDF11O95390 407 aa24.39■■□□□ 1.49
CTSF-206ENST00000529199 ASNSP08243 561 aa24.39■■□□□ 1.49
CTSF-206ENST00000529199 ZAP70P43403 619 aa24.39■■□□□ 1.49
CTSF-206ENST00000529199 JAG1P78504 1218 aa24.39■■□□□ 1.49
CTSF-206ENST00000529199 FOXP4Q8IVH2 680 aaPredicted RBP24.39■■□□□ 1.49
CTSF-206ENST00000529199 SSH3Q8TE77 659 aa24.39■■□□□ 1.49
CTSF-206ENST00000529199 PAWRQ96IZ0 340 aaKnown RBP24.39■■□□□ 1.49
CTSF-206ENST00000529199 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.39■■□□□ 1.49
CTSF-206ENST00000529199 FLT1P17948 1338 aa24.38■■□□□ 1.49
CTSF-206ENST00000529199 CAPN2P17655 700 aa24.38■■□□□ 1.49
CTSF-206ENST00000529199 BACE1P56817 501 aa24.38■■□□□ 1.49
CTSF-206ENST00000529199 P2RX7Q99572 595 aaKnown RBP24.38■■□□□ 1.49
CTSF-206ENST00000529199 GJD2Q9UKL4 321 aa24.38■■□□□ 1.49
CTSF-206ENST00000529199 PEX10O60683 326 aa24.37■■□□□ 1.49
CTSF-206ENST00000529199 HMGCRP04035 888 aa24.37■■□□□ 1.49
CTSF-206ENST00000529199 SHROOM1Q2M3G4 852 aaPredicted RBP24.37■■□□□ 1.49
CTSF-206ENST00000529199 CRISPLD2Q9H0B8 497 aa24.37■■□□□ 1.49
CTSF-206ENST00000529199 PIH1D3Q9NQM4 214 aaKnown RBP24.37■■□□□ 1.49
CTSF-206ENST00000529199 CYP7A1P22680 504 aa24.36■■□□□ 1.49
CTSF-206ENST00000529199 DYNLL1P63167 89 aaKnown RBP24.36■■□□□ 1.49
CTSF-206ENST00000529199 TRIM32Q13049 653 aa24.36■■□□□ 1.49
CTSF-206ENST00000529199 NECAB2Q7Z6G3 386 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms