RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 TTLL12Q14166 644 aaPredicted RBP9.39□□□□□ -0.91
SSBP3-211ENST00000528787 CTR9Q6PD62 1173 aa9.39□□□□□ -0.91
SSBP3-211ENST00000528787 ZNF589Q86UQ0 364 aaPredicted RBP9.39□□□□□ -0.91
SSBP3-211ENST00000528787 METTL16Q86W50 562 aaKnown RBP9.39□□□□□ -0.91
SSBP3-211ENST00000528787 IQCA1Q86XH1 822 aa9.39□□□□□ -0.91
SSBP3-211ENST00000528787 NCOA7Q8NI08 942 aa9.39□□□□□ -0.91
SSBP3-211ENST00000528787 ESR2Q92731 530 aa9.39□□□□□ -0.91
SSBP3-211ENST00000528787 SH2D4AQ9H788 454 aa9.39□□□□□ -0.91
SSBP3-211ENST00000528787 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.39□□□□□ -0.91
SSBP3-211ENST00000528787 FAM198AQ9UFP1 575 aa9.39□□□□□ -0.91
SSBP3-211ENST00000528787 MKRN1Q9UHC7 482 aaKnown RBP9.39□□□□□ -0.91
SSBP3-211ENST00000528787 PAPPA2Q9BXP8 1791 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 SHTN1A0MZ66 631 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 KIF3CO14782 793 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 ORC4O43929 436 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 CTNND1O60716 968 aaKnown RBP9.38□□□□□ -0.91
SSBP3-211ENST00000528787 EGFRP00533 1210 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 MAP3K10Q02779 954 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 NFIAQ12857 509 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 TSGA10IPQ3SY00 556 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 AKNAD1Q5T1N1 836 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 C16orf86Q6ZW13 317 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 ANKRD13AQ8IZ07 590 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 TMTC2Q8N394 836 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 STAG1Q8WVM7 1258 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 CDCA5Q96FF9 252 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 LSG1Q9H089 658 aaKnown RBP9.38□□□□□ -0.91
SSBP3-211ENST00000528787 AS3MTQ9HBK9 375 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 PICK1Q9NRD5 415 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 PALD1Q9ULE6 856 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 SYNPO2Q9UMS6 1093 aa9.38□□□□□ -0.91
SSBP3-211ENST00000528787 RBM8AQ9Y5S9 174 aaKnown RBP9.38□□□□□ -0.91
SSBP3-211ENST00000528787 DDX60LQ5H9U9 1706 aaKnown RBP9.38□□□□□ -0.91
SSBP3-211ENST00000528787 CNTNAP1P78357 1384 aa9.37□□□□□ -0.91
SSBP3-211ENST00000528787 PRKAB2O43741 272 aa9.37□□□□□ -0.91
SSBP3-211ENST00000528787 HSPA4P34932 840 aa9.37□□□□□ -0.91
SSBP3-211ENST00000528787 CACNB3P54284 484 aa9.37□□□□□ -0.91
SSBP3-211ENST00000528787 MAP3K11Q16584 847 aa9.37□□□□□ -0.91
SSBP3-211ENST00000528787 CERKLQ49MI3 558 aaPredicted RBP9.37□□□□□ -0.91
SSBP3-211ENST00000528787 MAP1SQ66K74 1059 aaPredicted RBP9.37□□□□□ -0.91
SSBP3-211ENST00000528787 TATDN1Q6P1N9 297 aa9.37□□□□□ -0.91
SSBP3-211ENST00000528787 CCDC129Q6ZRS4 1044 aa9.37□□□□□ -0.91
SSBP3-211ENST00000528787 TMEM179Q6ZVK1 233 aa9.37□□□□□ -0.91
SSBP3-211ENST00000528787 SKAP1Q86WV1 359 aa9.37□□□□□ -0.91
SSBP3-211ENST00000528787 REM2Q8IYK8 340 aaPredicted RBP9.37□□□□□ -0.91
SSBP3-211ENST00000528787 HHIPL1Q96JK4 782 aa9.37□□□□□ -0.91
SSBP3-211ENST00000528787 UBAC1Q9BSL1 405 aa9.37□□□□□ -0.91
SSBP3-211ENST00000528787 USP26Q9BXU7 913 aa9.37□□□□□ -0.91
SSBP3-211ENST00000528787 TMEM39BQ9GZU3 492 aa9.37□□□□□ -0.91
SSBP3-211ENST00000528787 DDX4Q9NQI0 724 aaKnown RBP9.37□□□□□ -0.91
SSBP3-211ENST00000528787 TOMM22Q9NS69 142 aa9.37□□□□□ -0.91
SSBP3-211ENST00000528787 SAP30BPQ9UHR5 308 aaKnown RBP9.37□□□□□ -0.91
SSBP3-211ENST00000528787 WDR19Q8NEZ3 1342 aa9.36□□□□□ -0.91
SSBP3-211ENST00000528787 TSPY2A6NKD2 308 aa9.36□□□□□ -0.91
SSBP3-211ENST00000528787 FGRP09769 529 aa9.36□□□□□ -0.91
SSBP3-211ENST00000528787 TSPY3P0CV98 308 aa9.36□□□□□ -0.91
SSBP3-211ENST00000528787 TSPY8P0CW00 308 aa9.36□□□□□ -0.91
SSBP3-211ENST00000528787 MCM5P33992 734 aa9.36□□□□□ -0.91
SSBP3-211ENST00000528787 MAP3K9P80192 1104 aa9.36□□□□□ -0.91
SSBP3-211ENST00000528787 NECTIN1Q15223 517 aa9.36□□□□□ -0.91
SSBP3-211ENST00000528787 ANKRD1Q15327 319 aa9.36□□□□□ -0.91
SSBP3-211ENST00000528787 ABCB5Q2M3G0 1257 aa9.36□□□□□ -0.91
SSBP3-211ENST00000528787 C8orf34Q49A92 452 aa9.36□□□□□ -0.91
SSBP3-211ENST00000528787 CREB3L3Q68CJ9 461 aa9.36□□□□□ -0.91
SSBP3-211ENST00000528787 TEPSINQ96N21 525 aa9.36□□□□□ -0.91
SSBP3-211ENST00000528787 TTC14Q96N46 770 aa9.36□□□□□ -0.91
SSBP3-211ENST00000528787 BACH2Q9BYV9 841 aa9.36□□□□□ -0.91
SSBP3-211ENST00000528787 GLIS2Q9BZE0 524 aaPredicted RBP9.36□□□□□ -0.91
SSBP3-211ENST00000528787 KANSL2Q9H9L4 492 aa9.36□□□□□ -0.91
SSBP3-211ENST00000528787 ARHGEF10LQ9HCE6 1279 aa9.36□□□□□ -0.91
SSBP3-211ENST00000528787 GBA2Q9HCG7 927 aaPredicted RBP9.36□□□□□ -0.91
SSBP3-211ENST00000528787 DDTLA6NHG4 134 aaPredicted RBP9.35□□□□□ -0.91
SSBP3-211ENST00000528787 TMEM88BA6NKF7 163 aa9.35□□□□□ -0.91
SSBP3-211ENST00000528787 RANBP6O60518 1105 aaKnown RBP9.35□□□□□ -0.91
SSBP3-211ENST00000528787 CELF2O95319 508 aaKnown RBP9.35□□□□□ -0.91
SSBP3-211ENST00000528787 CDK8P49336 464 aa9.35□□□□□ -0.91
SSBP3-211ENST00000528787 USP14P54578 494 aa9.35□□□□□ -0.91
SSBP3-211ENST00000528787 FGD1P98174 961 aa9.35□□□□□ -0.91
SSBP3-211ENST00000528787 GABPAQ06546 454 aa9.35□□□□□ -0.91
SSBP3-211ENST00000528787 DOCK1Q14185 1865 aa9.35□□□□□ -0.91
SSBP3-211ENST00000528787 SLFNL1Q499Z3 407 aa9.35□□□□□ -0.91
SSBP3-211ENST00000528787 NOL9Q5SY16 702 aaKnown RBP9.35□□□□□ -0.91
SSBP3-211ENST00000528787 NBPF12Q5TAG4 269 aaPredicted RBP9.35□□□□□ -0.91
SSBP3-211ENST00000528787 VPS53Q5VIR6 699 aa9.35□□□□□ -0.91
SSBP3-211ENST00000528787 SCYL3Q8IZE3 742 aa9.35□□□□□ -0.91
SSBP3-211ENST00000528787 CCDC102AQ96A19 550 aa9.35□□□□□ -0.91
SSBP3-211ENST00000528787 TMEM87BQ96K49 555 aa9.35□□□□□ -0.91
SSBP3-211ENST00000528787 WRNIP1Q96S55 665 aa9.35□□□□□ -0.91
SSBP3-211ENST00000528787 C22orf23Q9BZE7 217 aa9.35□□□□□ -0.91
SSBP3-211ENST00000528787 TM6SF1Q9BZW5 370 aa9.35□□□□□ -0.91
SSBP3-211ENST00000528787 EPB41L4AQ9HCS5 686 aaPredicted RBP9.35□□□□□ -0.91
SSBP3-211ENST00000528787 TCP11L1Q9NUJ3 509 aa9.35□□□□□ -0.91
SSBP3-211ENST00000528787 ZNF112Q9UJU3 913 aa9.35□□□□□ -0.91
SSBP3-211ENST00000528787 ANGEL1Q9UNK9 670 aaKnown RBP9.35□□□□□ -0.91
SSBP3-211ENST00000528787 PCDHAC2Q9Y5I4 1007 aa9.35□□□□□ -0.91
SSBP3-211ENST00000528787 PASKQ96RG2 1323 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 ATAD5Q96QE3 1844 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 ADM5C9JUS6 153 aa9.34□□□□□ -0.91
SSBP3-211ENST00000528787 MPHOSPH10O00566 681 aaKnown RBP9.34□□□□□ -0.91
SSBP3-211ENST00000528787 SLC27A2O14975 620 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms