RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 PLCL1Q15111 1095 aa4.98□□□□□ -1.61
BRCA2-203ENST00000528762 CPSF6Q16630 551 aaKnown RBP eCLIP4.98□□□□□ -1.61
BRCA2-203ENST00000528762 PRPF40BQ6NWY9 871 aaKnown RBP4.98□□□□□ -1.61
BRCA2-203ENST00000528762 OGFOD3Q6PK18 319 aa4.98□□□□□ -1.61
BRCA2-203ENST00000528762 MPRIPQ6WCQ1 1025 aa4.98□□□□□ -1.61
BRCA2-203ENST00000528762 CBLL1Q75N03 491 aa4.98□□□□□ -1.61
BRCA2-203ENST00000528762 USP48Q86UV5 1035 aa4.98□□□□□ -1.61
BRCA2-203ENST00000528762 WFDC3Q8IUB2 231 aa4.98□□□□□ -1.61
BRCA2-203ENST00000528762 BCL7CQ8WUZ0 217 aaPredicted RBP4.98□□□□□ -1.61
BRCA2-203ENST00000528762 PUS7Q96PZ0 661 aaKnown RBP4.98□□□□□ -1.61
BRCA2-203ENST00000528762 GMLQ99445 158 aa4.98□□□□□ -1.61
BRCA2-203ENST00000528762 GSX1Q9H4S2 264 aaPredicted RBP4.98□□□□□ -1.61
BRCA2-203ENST00000528762 CRIM1Q9NZV1 1036 aa4.98□□□□□ -1.61
BRCA2-203ENST00000528762 INPP5FQ9Y2H2 1132 aa4.98□□□□□ -1.61
BRCA2-203ENST00000528762 GSTP1P09211 210 aaKnown RBP4.97□□□□□ -1.61
BRCA2-203ENST00000528762 YBX3P16989 372 aaKnown RBP eCLIP4.97□□□□□ -1.61
BRCA2-203ENST00000528762 TNNI2P48788 182 aa4.97□□□□□ -1.61
BRCA2-203ENST00000528762 CYP27A1Q02318 531 aa4.97□□□□□ -1.61
BRCA2-203ENST00000528762 ID3Q02535 119 aa4.97□□□□□ -1.61
BRCA2-203ENST00000528762 MEI1Q5TIA1 1274 aa4.97□□□□□ -1.61
BRCA2-203ENST00000528762 DISC1Q9NRI5 854 aa4.97□□□□□ -1.61
BRCA2-203ENST00000528762 TRAK1Q9UPV9 953 aa4.97□□□□□ -1.61
BRCA2-203ENST00000528762 AKAP2Q9Y2D5 859 aa4.97□□□□□ -1.61
BRCA2-203ENST00000528762 CSADQ9Y600 493 aa4.97□□□□□ -1.61
BRCA2-203ENST00000528762 RBAK-RBAKDNI3L0D1 243 aa4.96□□□□□ -1.62
BRCA2-203ENST00000528762 NEFMP07197 916 aa4.96□□□□□ -1.62
BRCA2-203ENST00000528762 ITIH2P19823 946 aa4.96□□□□□ -1.62
BRCA2-203ENST00000528762 GSTT1P30711 240 aa4.96□□□□□ -1.62
BRCA2-203ENST00000528762 ARID5AQ03989 594 aa4.96□□□□□ -1.62
BRCA2-203ENST00000528762 ZNF394Q53GI3 561 aa4.96□□□□□ -1.62
BRCA2-203ENST00000528762 MAP1SQ66K74 1059 aaPredicted RBP4.96□□□□□ -1.62
BRCA2-203ENST00000528762 RELL1Q8IUW5 271 aa4.96□□□□□ -1.62
BRCA2-203ENST00000528762 SMYD4Q8IYR2 804 aaPredicted RBP4.96□□□□□ -1.62
BRCA2-203ENST00000528762 ZFYVE1Q9HBF4 777 aa4.96□□□□□ -1.62
BRCA2-203ENST00000528762 SLC5A6Q9Y289 635 aa4.96□□□□□ -1.62
BRCA2-203ENST00000528762 KRTAP4-8A0A0G2JLE6 195 aa4.95□□□□□ -1.62
BRCA2-203ENST00000528762 EIF4EBP3O60516 100 aaPredicted RBP4.95□□□□□ -1.62
BRCA2-203ENST00000528762 FBXO24O75426 580 aa4.95□□□□□ -1.62
BRCA2-203ENST00000528762 SLFN14P0C7P3 912 aa4.95□□□□□ -1.62
BRCA2-203ENST00000528762 DNAJA1P31689 397 aaKnown RBP4.95□□□□□ -1.62
BRCA2-203ENST00000528762 ZNF792Q3KQV3 632 aa4.95□□□□□ -1.62
BRCA2-203ENST00000528762 SULF2Q8IWU5 870 aa4.95□□□□□ -1.62
BRCA2-203ENST00000528762 TOP6BLQ8N6T0 577 aa4.95□□□□□ -1.62
BRCA2-203ENST00000528762 AGBL5Q8NDL9 886 aa4.95□□□□□ -1.62
BRCA2-203ENST00000528762 RSRP1Q9BUV0 290 aa4.95□□□□□ -1.62
BRCA2-203ENST00000528762 NOC4LQ9BVI4 516 aaKnown RBP4.95□□□□□ -1.62
BRCA2-203ENST00000528762 ATXN3LQ9H3M9 355 aa4.95□□□□□ -1.62
BRCA2-203ENST00000528762 CBX8Q9HC52 389 aa4.95□□□□□ -1.62
BRCA2-203ENST00000528762 SSU72Q9NP77 194 aaKnown RBP4.95□□□□□ -1.62
BRCA2-203ENST00000528762 PCDHGC5Q9Y5F6 944 aa4.95□□□□□ -1.62
BRCA2-203ENST00000528762 PCDHGB7Q9Y5F8 929 aa4.95□□□□□ -1.62
BRCA2-203ENST00000528762 CADPSQ9ULU8 1353 aa4.94□□□□□ -1.62
BRCA2-203ENST00000528762 PAPLNO95428 1278 aa4.94□□□□□ -1.62
BRCA2-203ENST00000528762 CD8BP10966 210 aa4.94□□□□□ -1.62
BRCA2-203ENST00000528762 XRCC5P13010 732 aaKnown RBP4.94□□□□□ -1.62
BRCA2-203ENST00000528762 ITGB5P18084 799 aa4.94□□□□□ -1.62
BRCA2-203ENST00000528762 GTF2F1P35269 517 aaKnown RBP eCLIP4.94□□□□□ -1.62
BRCA2-203ENST00000528762 KIF4BQ2VIQ3 1234 aa4.94□□□□□ -1.62
BRCA2-203ENST00000528762 CYP27C1Q4G0S4 372 aa4.94□□□□□ -1.62
BRCA2-203ENST00000528762 RPS26P11Q5JNZ5 115 aaPredicted RBP4.94□□□□□ -1.62
BRCA2-203ENST00000528762 ARHGAP27Q6ZUM4 889 aa4.94□□□□□ -1.62
BRCA2-203ENST00000528762 UBE3DQ7Z6J8 389 aa4.94□□□□□ -1.62
BRCA2-203ENST00000528762 PDZD3Q86UT5 571 aa4.94□□□□□ -1.62
BRCA2-203ENST00000528762 DHX38Q92620 1227 aaKnown RBP4.94□□□□□ -1.62
BRCA2-203ENST00000528762 ISL2Q96A47 359 aa4.94□□□□□ -1.62
BRCA2-203ENST00000528762 SPATA32Q96LK8 384 aa4.94□□□□□ -1.62
BRCA2-203ENST00000528762 PRDM7Q9NQW5 492 aa4.94□□□□□ -1.62
BRCA2-203ENST00000528762 TMEM39AQ9NV64 488 aa4.94□□□□□ -1.62
BRCA2-203ENST00000528762 ADAMTS6Q9UKP5 1117 aa4.94□□□□□ -1.62
BRCA2-203ENST00000528762 PPP2R3AQ06190 1150 aa4.93□□□□□ -1.62
BRCA2-203ENST00000528762 RBL2Q08999 1139 aa4.93□□□□□ -1.62
BRCA2-203ENST00000528762 PWP1Q13610 501 aa4.93□□□□□ -1.62
BRCA2-203ENST00000528762 ZNF648Q5T619 568 aaPredicted RBP4.93□□□□□ -1.62
BRCA2-203ENST00000528762 TPTE2Q6XPS3 522 aa4.93□□□□□ -1.62
BRCA2-203ENST00000528762 DPH6Q7L8W6 267 aa4.93□□□□□ -1.62
BRCA2-203ENST00000528762 ERMP1Q7Z2K6 904 aa4.93□□□□□ -1.62
BRCA2-203ENST00000528762 GRIN3AQ8TCU5 1115 aa4.93□□□□□ -1.62
BRCA2-203ENST00000528762 GPBAR1Q8TDU6 330 aa4.93□□□□□ -1.62
BRCA2-203ENST00000528762 ARMC5Q96C12 935 aa4.93□□□□□ -1.62
BRCA2-203ENST00000528762 ASIC4Q96FT7 647 aa4.93□□□□□ -1.62
BRCA2-203ENST00000528762 ACSBG1Q96GR2 724 aa4.93□□□□□ -1.62
BRCA2-203ENST00000528762 DUSP23Q9BVJ7 150 aa4.93□□□□□ -1.62
BRCA2-203ENST00000528762 RC3H2Q9HBD1 1191 aaKnown RBP4.93□□□□□ -1.62
BRCA2-203ENST00000528762 COPRSQ9NQ92 184 aa4.93□□□□□ -1.62
BRCA2-203ENST00000528762 TTF2Q9UNY4 1162 aaKnown RBP4.93□□□□□ -1.62
BRCA2-203ENST00000528762 DCDC2CA8MYV0 355 aa4.92□□□□□ -1.62
BRCA2-203ENST00000528762 MINDY4BA8MYZ0 360 aa4.92□□□□□ -1.62
BRCA2-203ENST00000528762 PAGE1O75459 146 aa4.92□□□□□ -1.62
BRCA2-203ENST00000528762 C8AP07357 584 aa4.92□□□□□ -1.62
BRCA2-203ENST00000528762 RNASE1P07998 156 aaKnown RBP4.92□□□□□ -1.62
BRCA2-203ENST00000528762 RLBP1P12271 317 aa4.92□□□□□ -1.62
BRCA2-203ENST00000528762 PAK2Q13177 524 aa4.92□□□□□ -1.62
BRCA2-203ENST00000528762 ZNF124Q15973 351 aa4.92□□□□□ -1.62
BRCA2-203ENST00000528762 AOC3Q16853 763 aa4.92□□□□□ -1.62
BRCA2-203ENST00000528762 PPM1JQ5JR12 505 aa4.92□□□□□ -1.62
BRCA2-203ENST00000528762 SOGA3Q5TF21 947 aa4.92□□□□□ -1.62
BRCA2-203ENST00000528762 GIMAP6Q6P9H5 292 aa4.92□□□□□ -1.62
BRCA2-203ENST00000528762 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.92□□□□□ -1.62
BRCA2-203ENST00000528762 NETO1Q8TDF5 533 aa4.92□□□□□ -1.62
BRCA2-203ENST00000528762 DNAJC2Q99543 621 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms