RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 AEBP2Q6ZN18 517 aaPredicted RBP18.16■□□□□ 0.5
BRCA2-203ENST00000528762 CHIC1Q5VXU3 224 aa17.25■□□□□ 0.35
BRCA2-203ENST00000528762 SENP3Q9H4L4 574 aaPredicted RBP15.36■□□□□ 0.05
BRCA2-203ENST00000528762 PHF23Q9BUL5 403 aaPredicted RBP15.24■□□□□ 0.03
BRCA2-203ENST00000528762 FOXD1Q16676 465 aa14.39□□□□□ -0.11
BRCA2-203ENST00000528762 PLPPR3Q6T4P5 718 aa13.8□□□□□ -0.2
BRCA2-203ENST00000528762 PPP6R1Q9UPN7 881 aa13.57□□□□□ -0.24
BRCA2-203ENST00000528762 ADRA2BP18089 450 aa13.55□□□□□ -0.24
BRCA2-203ENST00000528762 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
BRCA2-203ENST00000528762 MSH5O43196 834 aa13.32□□□□□ -0.28
BRCA2-203ENST00000528762 POTEDQ86YR6 584 aa12.94□□□□□ -0.34
BRCA2-203ENST00000528762 MAPK8IP2Q13387 824 aaPredicted RBP12.44□□□□□ -0.42
BRCA2-203ENST00000528762 SCAF1Q9H7N4 1312 aaKnown RBP12.23□□□□□ -0.45
BRCA2-203ENST00000528762 DMRT2Q9Y5R5 561 aa12.21□□□□□ -0.45
BRCA2-203ENST00000528762 PPP4R3CPQ6ZMV5 832 aa12.17□□□□□ -0.46
BRCA2-203ENST00000528762 CNKSR2Q8WXI2 1034 aa11.86□□□□□ -0.51
BRCA2-203ENST00000528762 DCAF8L1A6NGE4 600 aa11.85□□□□□ -0.51
BRCA2-203ENST00000528762 HOXD11P31277 338 aaPredicted RBP11.77□□□□□ -0.53
BRCA2-203ENST00000528762 RNF216Q9NWF9 866 aaPredicted RBP11.71□□□□□ -0.53
BRCA2-203ENST00000528762 NCBP3Q53F19 620 aaKnown RBP11.66□□□□□ -0.54
BRCA2-203ENST00000528762 NPM3O75607 178 aaKnown RBP11.57□□□□□ -0.56
BRCA2-203ENST00000528762 KCNA4P22459 653 aa11.48□□□□□ -0.57
BRCA2-203ENST00000528762 CACNB1Q02641 598 aaPredicted RBP11.47□□□□□ -0.57
BRCA2-203ENST00000528762 RNF39Q9H2S5 420 aa11.42□□□□□ -0.58
BRCA2-203ENST00000528762 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.3□□□□□ -0.6
BRCA2-203ENST00000528762 C1QBPQ07021 282 aaKnown RBP11.21□□□□□ -0.61
BRCA2-203ENST00000528762 DNAJC5BQ9UF47 199 aa11.2□□□□□ -0.62
BRCA2-203ENST00000528762 U3KPZ7 1027 aaPredicted RBP11.08□□□□□ -0.64
BRCA2-203ENST00000528762 SLC4A2P04920 1241 aa11.04□□□□□ -0.64
BRCA2-203ENST00000528762 SPINK5Q9NQ38 1064 aaPredicted RBP10.94□□□□□ -0.66
BRCA2-203ENST00000528762 CAPN15O75808 1086 aa10.9□□□□□ -0.66
BRCA2-203ENST00000528762 SLC4A1APQ9BWU0 796 aaKnown RBP10.82□□□□□ -0.68
BRCA2-203ENST00000528762 TRHP20396 242 aaPredicted RBP10.77□□□□□ -0.69
BRCA2-203ENST00000528762 DSG3P32926 999 aa10.75□□□□□ -0.69
BRCA2-203ENST00000528762 ABCB7O75027 752 aa10.71□□□□□ -0.69
BRCA2-203ENST00000528762 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.66□□□□□ -0.7
BRCA2-203ENST00000528762 HNRNPUL2Q1KMD3 747 aaKnown RBP10.66□□□□□ -0.7
BRCA2-203ENST00000528762 MYCNP04198 464 aaPredicted RBP10.64□□□□□ -0.71
BRCA2-203ENST00000528762 SAMD1Q6SPF0 538 aaPredicted RBP10.64□□□□□ -0.71
BRCA2-203ENST00000528762 APLP2Q06481 763 aa10.63□□□□□ -0.71
BRCA2-203ENST00000528762 ZNF219Q9P2Y4 722 aaPredicted RBP10.62□□□□□ -0.71
BRCA2-203ENST00000528762 FOXD4L1Q9NU39 408 aa10.61□□□□□ -0.71
BRCA2-203ENST00000528762 ZBTB22O15209 634 aa10.58□□□□□ -0.72
BRCA2-203ENST00000528762 ATF5Q9Y2D1 282 aaPredicted RBP10.51□□□□□ -0.73
BRCA2-203ENST00000528762 POLA2Q14181 598 aa10.46□□□□□ -0.73
BRCA2-203ENST00000528762 RBM42Q9BTD8 480 aaKnown RBP10.18□□□□□ -0.78
BRCA2-203ENST00000528762 ATXN8OSP0DMR3 200 aa10.17□□□□□ -0.78
BRCA2-203ENST00000528762 EHMT2Q96KQ7 1210 aa10.17□□□□□ -0.78
BRCA2-203ENST00000528762 POTEHQ6S545 545 aa10.15□□□□□ -0.78
BRCA2-203ENST00000528762 OSCARQ8IYS5 282 aa10.15□□□□□ -0.78
BRCA2-203ENST00000528762 CSRNP3Q8WYN3 585 aa10.14□□□□□ -0.79
BRCA2-203ENST00000528762 ZBTB12Q9Y330 459 aaPredicted RBP10.12□□□□□ -0.79
BRCA2-203ENST00000528762 MKRN4PQ13434 485 aaPredicted RBP10□□□□□ -0.81
BRCA2-203ENST00000528762 CHRDL2Q6WN34 429 aa10□□□□□ -0.81
BRCA2-203ENST00000528762 FBLN2P98095 1184 aa9.99□□□□□ -0.81
BRCA2-203ENST00000528762 AKT1S1Q96B36 256 aa9.98□□□□□ -0.81
BRCA2-203ENST00000528762 REM2Q8IYK8 340 aaPredicted RBP9.96□□□□□ -0.82
BRCA2-203ENST00000528762 PITPNM1O00562 1244 aa9.88□□□□□ -0.83
BRCA2-203ENST00000528762 SPDYE2BA6NHP3 402 aa9.86□□□□□ -0.83
BRCA2-203ENST00000528762 SPDYE6P0CI01 402 aa9.86□□□□□ -0.83
BRCA2-203ENST00000528762 SPDYE2Q495Y8 402 aa9.86□□□□□ -0.83
BRCA2-203ENST00000528762 ZNF692Q9BU19 519 aaPredicted RBP9.82□□□□□ -0.84
BRCA2-203ENST00000528762 PIP4P2Q8N4L2 257 aa9.81□□□□□ -0.84
BRCA2-203ENST00000528762 CLEC11AQ9Y240 323 aa9.77□□□□□ -0.85
BRCA2-203ENST00000528762 SSUH2Q9Y2M2 353 aa9.75□□□□□ -0.85
BRCA2-203ENST00000528762 PABPN1Q86U42 306 aaKnown RBP eCLIP9.71□□□□□ -0.86
BRCA2-203ENST00000528762 FXR2P51116 673 aaKnown RBP eCLIP9.7□□□□□ -0.86
BRCA2-203ENST00000528762 SPDYE1Q8NFV5 336 aaPredicted RBP9.68□□□□□ -0.86
BRCA2-203ENST00000528762 HAX1O00165 279 aa9.62□□□□□ -0.87
BRCA2-203ENST00000528762 PRKAR2AP13861 404 aaKnown RBP9.62□□□□□ -0.87
BRCA2-203ENST00000528762 CHADLQ6NUI6 762 aa9.6□□□□□ -0.87
BRCA2-203ENST00000528762 PRR29P0C7W0 189 aa9.56□□□□□ -0.88
BRCA2-203ENST00000528762 SPDYE4A6NLX3 237 aa9.55□□□□□ -0.88
BRCA2-203ENST00000528762 EVX2Q03828 476 aa9.55□□□□□ -0.88
BRCA2-203ENST00000528762 SP7Q8TDD2 431 aaPredicted RBP9.55□□□□□ -0.88
BRCA2-203ENST00000528762 C19orf67A6NJJ6 358 aa9.4□□□□□ -0.9
BRCA2-203ENST00000528762 FARP1Q9Y4F1 1045 aaPredicted RBP9.38□□□□□ -0.91
BRCA2-203ENST00000528762 CREBZFQ9NS37 354 aa9.36□□□□□ -0.91
BRCA2-203ENST00000528762 STAG3Q9UJ98 1225 aa9.33□□□□□ -0.92
BRCA2-203ENST00000528762 CD44P16070 742 aaKnown RBP9.32□□□□□ -0.92
BRCA2-203ENST00000528762 GABBR2O75899 941 aa9.28□□□□□ -0.92
BRCA2-203ENST00000528762 PROM2Q8N271 834 aa9.25□□□□□ -0.93
BRCA2-203ENST00000528762 FKBP8Q14318 412 aa9.23□□□□□ -0.93
BRCA2-203ENST00000528762 ZRANB1Q9UGI0 708 aa9.22□□□□□ -0.93
BRCA2-203ENST00000528762 MNX1P50219 401 aaPredicted RBP9.18□□□□□ -0.94
BRCA2-203ENST00000528762 PHF12Q96QT6 1004 aa9.14□□□□□ -0.95
BRCA2-203ENST00000528762 MIER1Q8N108 512 aa9.12□□□□□ -0.95
BRCA2-203ENST00000528762 ZNF579Q8NAF0 562 aaKnown RBP9.12□□□□□ -0.95
BRCA2-203ENST00000528762 NPM1P06748 294 aaKnown RBP eCLIP9.11□□□□□ -0.95
BRCA2-203ENST00000528762 POTEIP0CG38 1075 aa9.11□□□□□ -0.95
BRCA2-203ENST00000528762 GALR2O43603 387 aaPredicted RBP9.09□□□□□ -0.95
BRCA2-203ENST00000528762 PAK3O75914 559 aaPredicted RBP9.09□□□□□ -0.95
BRCA2-203ENST00000528762 TSPYL2Q9H2G4 693 aaPredicted RBP9.08□□□□□ -0.96
BRCA2-203ENST00000528762 PLCD3Q8N3E9 789 aa9.06□□□□□ -0.96
BRCA2-203ENST00000528762 DCBLD2Q96PD2 775 aa9.04□□□□□ -0.96
BRCA2-203ENST00000528762 PLEKHG5O94827 1062 aa9.01□□□□□ -0.97
BRCA2-203ENST00000528762 RASEFQ8IZ41 740 aa9.01□□□□□ -0.97
BRCA2-203ENST00000528762 MS4A3Q96HJ5 214 aa8.98□□□□□ -0.97
BRCA2-203ENST00000528762 LHX8Q68G74 356 aa8.97□□□□□ -0.97
BRCA2-203ENST00000528762 CLCN6P51797 869 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms