RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 TEPSINQ96N21 525 aa14.46□□□□□ -0.09
TRAF3IP2-211ENST00000528599 TACC3Q9Y6A5 838 aa14.46□□□□□ -0.09
TRAF3IP2-211ENST00000528599 COL2A1P02458 1487 aaPredicted RBP14.46□□□□□ -0.09
TRAF3IP2-211ENST00000528599 SLURP2P0DP57 97 aa14.46□□□□□ -0.1
TRAF3IP2-211ENST00000528599 PRAMEF18Q5VWM3 479 aa14.46□□□□□ -0.1
TRAF3IP2-211ENST00000528599 TTC6Q86TZ1 520 aa14.46□□□□□ -0.1
TRAF3IP2-211ENST00000528599 TBC1D10CQ8IV04 446 aa14.46□□□□□ -0.1
TRAF3IP2-211ENST00000528599 STK11IPQ8N1F8 1099 aa14.46□□□□□ -0.1
TRAF3IP2-211ENST00000528599 KCNB2Q92953 911 aa14.46□□□□□ -0.1
TRAF3IP2-211ENST00000528599 C22orf23Q9BZE7 217 aa14.46□□□□□ -0.1
TRAF3IP2-211ENST00000528599 DHX36Q9H2U1 1008 aaKnown RBP14.46□□□□□ -0.1
TRAF3IP2-211ENST00000528599 INCENPQ9NQS7 918 aa14.46□□□□□ -0.1
TRAF3IP2-211ENST00000528599 ANAPC4Q9UJX5 808 aa14.46□□□□□ -0.1
TRAF3IP2-211ENST00000528599 LAMA4Q16363 1823 aa14.45□□□□□ -0.1
TRAF3IP2-211ENST00000528599 KRT26Q7Z3Y9 468 aa14.45□□□□□ -0.1
TRAF3IP2-211ENST00000528599 SULF1Q8IWU6 871 aa14.45□□□□□ -0.1
TRAF3IP2-211ENST00000528599 AMOTL1Q8IY63 956 aa14.45□□□□□ -0.1
TRAF3IP2-211ENST00000528599 DYNLL2Q96FJ2 89 aa14.45□□□□□ -0.1
TRAF3IP2-211ENST00000528599 CSRNP1Q96S65 589 aa14.45□□□□□ -0.1
TRAF3IP2-211ENST00000528599 UPF2Q9HAU5 1272 aaKnown RBP14.45□□□□□ -0.1
TRAF3IP2-211ENST00000528599 LAMB1P07942 1786 aa14.45□□□□□ -0.1
TRAF3IP2-211ENST00000528599 SIPA1L1O43166 1804 aa14.44□□□□□ -0.1
TRAF3IP2-211ENST00000528599 MCCP23508 829 aa14.44□□□□□ -0.1
TRAF3IP2-211ENST00000528599 APLP1P51693 650 aa14.44□□□□□ -0.1
TRAF3IP2-211ENST00000528599 RNF20Q5VTR2 975 aa14.44□□□□□ -0.1
TRAF3IP2-211ENST00000528599 CST9Q5W186 159 aa14.44□□□□□ -0.1
TRAF3IP2-211ENST00000528599 STOX1Q6ZVD7 989 aa14.44□□□□□ -0.1
TRAF3IP2-211ENST00000528599 USP48Q86UV5 1035 aa14.44□□□□□ -0.1
TRAF3IP2-211ENST00000528599 PI4KBQ9UBF8 816 aa14.44□□□□□ -0.1
TRAF3IP2-211ENST00000528599 SNX14Q9Y5W7 946 aa14.44□□□□□ -0.1
TRAF3IP2-211ENST00000528599 TRPM7Q96QT4 1865 aa14.44□□□□□ -0.1
TRAF3IP2-211ENST00000528599 ROBO3Q96MS0 1386 aa14.43□□□□□ -0.1
TRAF3IP2-211ENST00000528599 HLA-DOAP06340 250 aa14.43□□□□□ -0.1
TRAF3IP2-211ENST00000528599 RBM25P49756 843 aaKnown RBP14.43□□□□□ -0.1
TRAF3IP2-211ENST00000528599 GABPAQ06546 454 aa14.43□□□□□ -0.1
TRAF3IP2-211ENST00000528599 NBPF12Q5TAG4 269 aaPredicted RBP14.43□□□□□ -0.1
TRAF3IP2-211ENST00000528599 SLC44A5Q8NCS7 719 aa14.43□□□□□ -0.1
TRAF3IP2-211ENST00000528599 TBC1D32Q96NH3 1257 aa14.43□□□□□ -0.1
TRAF3IP2-211ENST00000528599 EHD4Q9H223 541 aa14.43□□□□□ -0.1
TRAF3IP2-211ENST00000528599 DNAJC18Q9H819 358 aa14.43□□□□□ -0.1
TRAF3IP2-211ENST00000528599 SERPINB13Q9UIV8 391 aa14.43□□□□□ -0.1
TRAF3IP2-211ENST00000528599 PPP2R3BQ9Y5P8 575 aa14.43□□□□□ -0.1
TRAF3IP2-211ENST00000528599 FAM196BA6NMK8 535 aa14.42□□□□□ -0.1
TRAF3IP2-211ENST00000528599 E7EWF7 191 aa14.42□□□□□ -0.1
TRAF3IP2-211ENST00000528599 TSGA10IPQ3SY00 556 aa14.42□□□□□ -0.1
TRAF3IP2-211ENST00000528599 AKNAD1Q5T1N1 836 aa14.42□□□□□ -0.1
TRAF3IP2-211ENST00000528599 CDC37L1Q7L3B6 337 aa14.42□□□□□ -0.1
TRAF3IP2-211ENST00000528599 METTL16Q86W50 562 aaKnown RBP14.42□□□□□ -0.1
TRAF3IP2-211ENST00000528599 FOXP4Q8IVH2 680 aaPredicted RBP14.42□□□□□ -0.1
TRAF3IP2-211ENST00000528599 NKX2-3Q8TAU0 364 aa14.42□□□□□ -0.1
TRAF3IP2-211ENST00000528599 FGRP09769 529 aa14.42□□□□□ -0.1
TRAF3IP2-211ENST00000528599 ZKSCAN1P17029 563 aaPredicted RBP14.42□□□□□ -0.1
TRAF3IP2-211ENST00000528599 CDK8P49336 464 aa14.42□□□□□ -0.1
TRAF3IP2-211ENST00000528599 COL9A3Q14050 684 aaPredicted RBP14.42□□□□□ -0.1
TRAF3IP2-211ENST00000528599 ADCK5Q3MIX3 580 aa14.42□□□□□ -0.1
TRAF3IP2-211ENST00000528599 C16orf86Q6ZW13 317 aa14.42□□□□□ -0.1
TRAF3IP2-211ENST00000528599 STAG1Q8WVM7 1258 aa14.42□□□□□ -0.1
TRAF3IP2-211ENST00000528599 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.42□□□□□ -0.1
TRAF3IP2-211ENST00000528599 NEDD4P46934 1319 aa14.42□□□□□ -0.1
TRAF3IP2-211ENST00000528599 PRDM1O75626 825 aa14.41□□□□□ -0.1
TRAF3IP2-211ENST00000528599 SLC3A2P08195 630 aaKnown RBP14.41□□□□□ -0.1
TRAF3IP2-211ENST00000528599 MAP3K10Q02779 954 aa14.41□□□□□ -0.1
TRAF3IP2-211ENST00000528599 MFSD6Q6ZSS7 791 aa14.41□□□□□ -0.1
TRAF3IP2-211ENST00000528599 MIGA2Q7L4E1 593 aa14.41□□□□□ -0.1
TRAF3IP2-211ENST00000528599 CRACR2BQ8N4Y2 399 aaPredicted RBP14.41□□□□□ -0.1
TRAF3IP2-211ENST00000528599 KIF2CQ99661 725 aa14.41□□□□□ -0.1
TRAF3IP2-211ENST00000528599 SSC5DA1L4H1 1573 aa14.41□□□□□ -0.1
TRAF3IP2-211ENST00000528599 SHMT1P34896 483 aa14.4□□□□□ -0.1
TRAF3IP2-211ENST00000528599 ANAPC15P60006 121 aa14.4□□□□□ -0.1
TRAF3IP2-211ENST00000528599 IL17RAQ96F46 866 aa14.4□□□□□ -0.1
TRAF3IP2-211ENST00000528599 CDCA5Q96FF9 252 aa14.4□□□□□ -0.1
TRAF3IP2-211ENST00000528599 ORC4O43929 436 aa14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 TBC1D12O60347 775 aa14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 RASA1P20936 1047 aa14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 PDE4BQ07343 736 aa14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 RNF41Q9H4P4 317 aaPredicted RBP14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 ZNF408Q9H9D4 720 aa14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 SWAP70Q9UH65 585 aa14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 HERC5Q9UII4 1024 aaKnown RBP14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 B4E1Z4 1266 aa14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 CELF2O95319 508 aaKnown RBP14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 PCP11498 1178 aaKnown RBP14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 KRT32Q14532 448 aa14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 RRP1BQ14684 758 aaKnown RBP14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 SUPT20HL1Q3ZLR7 823 aa14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 RRP12Q5JTH9 1297 aaKnown RBP14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 TATDN1Q6P1N9 297 aa14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 JAKMIP1Q96N16 626 aaKnown RBP14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 MKNK2Q9HBH9 465 aa14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 CREBZFQ9NS37 354 aa14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 TOMM22Q9NS69 142 aa14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 FZD1Q9UP38 647 aa14.39□□□□□ -0.11
TRAF3IP2-211ENST00000528599 TMEM88BA6NKF7 163 aa14.38□□□□□ -0.11
TRAF3IP2-211ENST00000528599 CPA1P15085 419 aa14.38□□□□□ -0.11
TRAF3IP2-211ENST00000528599 DNAJC5GQ8N7S2 189 aa14.38□□□□□ -0.11
TRAF3IP2-211ENST00000528599 NEK1Q96PY6 1258 aa14.38□□□□□ -0.11
TRAF3IP2-211ENST00000528599 TRIM34Q9BYJ4 488 aa14.38□□□□□ -0.11
TRAF3IP2-211ENST00000528599 TAOK2Q9UL54 1235 aa14.38□□□□□ -0.11
TRAF3IP2-211ENST00000528599 PHF20L1A8MW92 1017 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms