RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 HTATIP2Q9BUP3 242 aa23.13■■□□□ 1.29
CAPN1-206ENST00000526966 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.13■■□□□ 1.29
CAPN1-206ENST00000526966 TRIM27P14373 513 aa23.12■■□□□ 1.29
CAPN1-206ENST00000526966 FAM110CQ1W6H9 321 aa23.12■■□□□ 1.29
CAPN1-206ENST00000526966 TREML2Q5T2D2 321 aa23.12■■□□□ 1.29
CAPN1-206ENST00000526966 CHRDL2Q6WN34 429 aa23.12■■□□□ 1.29
CAPN1-206ENST00000526966 TBC1D9Q6ZT07 1266 aa23.12■■□□□ 1.29
CAPN1-206ENST00000526966 PNMA3Q9UL41 463 aa23.12■■□□□ 1.29
CAPN1-206ENST00000526966 MYO5AQ9Y4I1 1855 aaKnown RBP23.12■■□□□ 1.29
CAPN1-206ENST00000526966 PNMA6EA0A0J9YXQ4 647 aa23.11■■□□□ 1.29
CAPN1-206ENST00000526966 SGPL1O95470 568 aa23.11■■□□□ 1.29
CAPN1-206ENST00000526966 GNAI2P04899 355 aa23.11■■□□□ 1.29
CAPN1-206ENST00000526966 INHAP05111 366 aa23.11■■□□□ 1.29
CAPN1-206ENST00000526966 ELNP15502 786 aa23.11■■□□□ 1.29
CAPN1-206ENST00000526966 MCAMP43121 646 aa23.11■■□□□ 1.29
CAPN1-206ENST00000526966 ANKRD13CQ8N6S4 541 aa23.11■■□□□ 1.29
CAPN1-206ENST00000526966 TBC1D2Q9BYX2 928 aa23.11■■□□□ 1.29
CAPN1-206ENST00000526966 ALPK3Q96L96 1907 aa23.1■■□□□ 1.29
CAPN1-206ENST00000526966 FARP2O94887 1054 aaPredicted RBP23.1■■□□□ 1.29
CAPN1-206ENST00000526966 CAPN2P17655 700 aa23.1■■□□□ 1.29
CAPN1-206ENST00000526966 GORABQ5T7V8 394 aa23.1■■□□□ 1.29
CAPN1-206ENST00000526966 RAI14Q9P0K7 980 aa23.1■■□□□ 1.29
CAPN1-206ENST00000526966 TNNQ9UQP3 1299 aa23.1■■□□□ 1.29
CAPN1-206ENST00000526966 IPO8O15397 1037 aaKnown RBP23.09■■□□□ 1.29
CAPN1-206ENST00000526966 CAP2P40123 477 aa23.09■■□□□ 1.29
CAPN1-206ENST00000526966 SPP2Q13103 211 aa23.09■■□□□ 1.29
CAPN1-206ENST00000526966 RRP1BQ14684 758 aaKnown RBP23.09■■□□□ 1.29
CAPN1-206ENST00000526966 ATF7IPQ6VMQ6 1270 aa23.09■■□□□ 1.29
CAPN1-206ENST00000526966 ZNF280CQ8ND82 737 aa23.09■■□□□ 1.29
CAPN1-206ENST00000526966 PRO3102Q9H379 93 aa23.09■■□□□ 1.29
CAPN1-206ENST00000526966 PAK6Q9NQU5 681 aaPredicted RBP23.09■■□□□ 1.29
CAPN1-206ENST00000526966 PLXNB2O15031 1838 aa23.08■■□□□ 1.29
CAPN1-206ENST00000526966 CCER2I3L3R5 266 aa23.08■■□□□ 1.29
CAPN1-206ENST00000526966 UQCRFS1P1P0C7P4 283 aa23.08■■□□□ 1.29
CAPN1-206ENST00000526966 G3BP1Q13283 466 aaKnown RBP eCLIP23.08■■□□□ 1.29
CAPN1-206ENST00000526966 TEX11Q8IYF3 940 aa23.08■■□□□ 1.29
CAPN1-206ENST00000526966 COA7Q96BR5 231 aa23.08■■□□□ 1.29
CAPN1-206ENST00000526966 RBM27Q9P2N5 1060 aaKnown RBP23.08■■□□□ 1.29
CAPN1-206ENST00000526966 HERC5Q9UII4 1024 aaKnown RBP23.08■■□□□ 1.29
CAPN1-206ENST00000526966 GCLCP48506 637 aaPredicted RBP23.07■■□□□ 1.28
CAPN1-206ENST00000526966 SH3D19Q5HYK7 790 aa23.07■■□□□ 1.28
CAPN1-206ENST00000526966 HMGCS2P54868 508 aa23.06■■□□□ 1.28
CAPN1-206ENST00000526966 SH3RF3Q8TEJ3 882 aaPredicted RBP23.06■■□□□ 1.28
CAPN1-206ENST00000526966 CRISPLD2Q9H0B8 497 aa23.06■■□□□ 1.28
CAPN1-206ENST00000526966 GPR108Q9NPR9 543 aa23.06■■□□□ 1.28
CAPN1-206ENST00000526966 LRP2BPQ9P2M1 347 aa23.06■■□□□ 1.28
CAPN1-206ENST00000526966 NR2E3Q9Y5X4 410 aa23.06■■□□□ 1.28
CAPN1-206ENST00000526966 USP17L5A8MUK1 530 aa23.05■■□□□ 1.28
CAPN1-206ENST00000526966 BCAR3O75815 825 aa23.05■■□□□ 1.28
CAPN1-206ENST00000526966 PABPC4Q13310 644 aaKnown RBP eCLIP23.05■■□□□ 1.28
CAPN1-206ENST00000526966 DEFB118Q96PH6 123 aa23.05■■□□□ 1.28
CAPN1-206ENST00000526966 ZBTB7BO15156 539 aaPredicted RBP23.04■■□□□ 1.28
CAPN1-206ENST00000526966 POLA2Q14181 598 aa23.04■■□□□ 1.28
CAPN1-206ENST00000526966 FRAT1Q92837 279 aaPredicted RBP23.04■■□□□ 1.28
CAPN1-206ENST00000526966 ASCC2Q9H1I8 757 aaPredicted RBP23.04■■□□□ 1.28
CAPN1-206ENST00000526966 DHX36Q9H2U1 1008 aaKnown RBP23.04■■□□□ 1.28
CAPN1-206ENST00000526966 AS3MTQ9HBK9 375 aa23.04■■□□□ 1.28
CAPN1-206ENST00000526966 PI4KBQ9UBF8 816 aa23.04■■□□□ 1.28
CAPN1-206ENST00000526966 PPP4CP60510 307 aa23.03■■□□□ 1.28
CAPN1-206ENST00000526966 TNNI3KQ59H18 835 aa23.03■■□□□ 1.28
CAPN1-206ENST00000526966 NAA16Q6N069 864 aaPredicted RBP23.03■■□□□ 1.28
CAPN1-206ENST00000526966 METTL16Q86W50 562 aaKnown RBP23.03■■□□□ 1.28
CAPN1-206ENST00000526966 CLUAP1Q96AJ1 413 aa23.03■■□□□ 1.28
CAPN1-206ENST00000526966 NOL10Q9BSC4 688 aaKnown RBP23.03■■□□□ 1.28
CAPN1-206ENST00000526966 WDR18Q9BV38 432 aa23.03■■□□□ 1.28
CAPN1-206ENST00000526966 AATFQ9NY61 560 aaKnown RBP eCLIP23.03■■□□□ 1.286e-6■■■■■ 54.7
CAPN1-206ENST00000526966 FPGT-TNNI3KV9GXZ4 949 aa23.03■■□□□ 1.28
CAPN1-206ENST00000526966 BAG3O95817 575 aa23.02■■□□□ 1.28
CAPN1-206ENST00000526966 TFRCP02786 760 aaKnown RBP23.02■■□□□ 1.28
CAPN1-206ENST00000526966 PLCG2P16885 1265 aa23.02■■□□□ 1.28
CAPN1-206ENST00000526966 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.02■■□□□ 1.28
CAPN1-206ENST00000526966 DNAJC18Q9H819 358 aa23.02■■□□□ 1.28
CAPN1-206ENST00000526966 MORF4L1Q9UBU8 362 aa23.02■■□□□ 1.28
CAPN1-206ENST00000526966 GJD2Q9UKL4 321 aa23.02■■□□□ 1.28
CAPN1-206ENST00000526966 TAOK2Q9UL54 1235 aa23.02■■□□□ 1.28
CAPN1-206ENST00000526966 LAMA3Q16787 3333 aa23.02■■□□□ 1.28
CAPN1-206ENST00000526966 MYH1P12882 1939 aa23.02■■□□□ 1.28
CAPN1-206ENST00000526966 IGSF3O75054 1194 aa23.01■■□□□ 1.27
CAPN1-206ENST00000526966 HMGCRP04035 888 aa23.01■■□□□ 1.27
CAPN1-206ENST00000526966 ASNSP08243 561 aa23.01■■□□□ 1.27
CAPN1-206ENST00000526966 TTC39AQ5SRH9 613 aa23.01■■□□□ 1.27
CAPN1-206ENST00000526966 ADGRA1Q86SQ6 560 aa23.01■■□□□ 1.27
CAPN1-206ENST00000526966 TMEM57Q8N5G2 664 aa23.01■■□□□ 1.27
CAPN1-206ENST00000526966 SSH3Q8TE77 659 aa23.01■■□□□ 1.27
CAPN1-206ENST00000526966 ZNF512BQ96KM6 892 aaPredicted RBP23.01■■□□□ 1.27
CAPN1-206ENST00000526966 DBNDD2Q9BQY9 259 aa23.01■■□□□ 1.27
CAPN1-206ENST00000526966 SNRKQ9NRH2 765 aa23.01■■□□□ 1.27
CAPN1-206ENST00000526966 FLT1P17948 1338 aa23.01■■□□□ 1.27
CAPN1-206ENST00000526966 CYP2E1P05181 493 aaPredicted RBP23■■□□□ 1.27
CAPN1-206ENST00000526966 MTMR2Q13614 643 aa23■■□□□ 1.27
CAPN1-206ENST00000526966 CCDC158Q5M9N0 1113 aa23■■□□□ 1.27
CAPN1-206ENST00000526966 EVI5O60447 810 aa22.99■■□□□ 1.27
CAPN1-206ENST00000526966 HOXA7P31268 230 aaPredicted RBP22.99■■□□□ 1.27
CAPN1-206ENST00000526966 BACE1P56817 501 aa22.99■■□□□ 1.27
CAPN1-206ENST00000526966 JAG1P78504 1218 aa22.99■■□□□ 1.27
CAPN1-206ENST00000526966 MAPKAPK5Q8IW41 473 aa22.99■■□□□ 1.27
CAPN1-206ENST00000526966 TGFBRAP1Q8WUH2 860 aa22.99■■□□□ 1.27
CAPN1-206ENST00000526966 DDX60LQ5H9U9 1706 aaKnown RBP22.99■■□□□ 1.27
CAPN1-206ENST00000526966 A0A1W2PPC1 479 aa22.98■■□□□ 1.27
CAPN1-206ENST00000526966 ATP8B2P98198 1209 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms