RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 ARID4AP29374 1257 aaPredicted RBP29.54■■■□□ 2.32
USP47-205ENST00000525257 OSBPL5Q9H0X9 879 aaPredicted RBP29.54■■■□□ 2.32
USP47-205ENST00000525257 PNMA3Q9UL41 463 aa29.54■■■□□ 2.32
USP47-205ENST00000525257 TNNQ9UQP3 1299 aa29.54■■■□□ 2.32
USP47-205ENST00000525257 COL2A1P02458 1487 aaPredicted RBP29.54■■■□□ 2.32
USP47-205ENST00000525257 SGPL1O95470 568 aa29.53■■■□□ 2.32
USP47-205ENST00000525257 SPP2Q13103 211 aa29.53■■■□□ 2.32
USP47-205ENST00000525257 IRF5Q13568 498 aa29.53■■■□□ 2.32
USP47-205ENST00000525257 PXYLP1Q8TE99 480 aa29.53■■■□□ 2.32
USP47-205ENST00000525257 RBM27Q9P2N5 1060 aaKnown RBP29.53■■■□□ 2.32
USP47-205ENST00000525257 PNMA6EA0A0J9YXQ4 647 aa29.52■■■□□ 2.32
USP47-205ENST00000525257 MAP4K4O95819 1239 aaPredicted RBP29.52■■■□□ 2.32
USP47-205ENST00000525257 GNAI2P04899 355 aa29.52■■■□□ 2.32
USP47-205ENST00000525257 MCAMP43121 646 aa29.52■■■□□ 2.32
USP47-205ENST00000525257 TEX11Q8IYF3 940 aa29.52■■■□□ 2.32
USP47-205ENST00000525257 PROCA1Q8NCQ7 364 aaPredicted RBP29.52■■■□□ 2.32
USP47-205ENST00000525257 COA7Q96BR5 231 aa29.52■■■□□ 2.32
USP47-205ENST00000525257 DOCK3Q8IZD9 2030 aa29.52■■■□□ 2.32
USP47-205ENST00000525257 TRIM27P14373 513 aa29.51■■■□□ 2.31
USP47-205ENST00000525257 G3BP1Q13283 466 aaKnown RBP eCLIP29.51■■■□□ 2.31
USP47-205ENST00000525257 FAM110CQ1W6H9 321 aa29.51■■■□□ 2.31
USP47-205ENST00000525257 ZNF280CQ8ND82 737 aa29.51■■■□□ 2.31
USP47-205ENST00000525257 DEFB118Q96PH6 123 aa29.51■■■□□ 2.31
USP47-205ENST00000525257 HMGCS2P54868 508 aa29.5■■■□□ 2.31
USP47-205ENST00000525257 RRP1BQ14684 758 aaKnown RBP29.5■■■□□ 2.31
USP47-205ENST00000525257 FRAT1Q92837 279 aaPredicted RBP29.5■■■□□ 2.31
USP47-205ENST00000525257 LRP2BPQ9P2M1 347 aa29.5■■■□□ 2.31
USP47-205ENST00000525257 IPO8O15397 1037 aaKnown RBP29.49■■■□□ 2.31
USP47-205ENST00000525257 TFRCP02786 760 aaKnown RBP29.49■■■□□ 2.31
USP47-205ENST00000525257 CAP2P40123 477 aa29.49■■■□□ 2.31
USP47-205ENST00000525257 SH3RF3Q8TEJ3 882 aaPredicted RBP29.49■■■□□ 2.31
USP47-205ENST00000525257 NR2E3Q9Y5X4 410 aa29.49■■■□□ 2.31
USP47-205ENST00000525257 UQCRFS1P1P0C7P4 283 aa29.48■■■□□ 2.31
USP47-205ENST00000525257 ATF7IPQ6VMQ6 1270 aa29.48■■■□□ 2.31
USP47-205ENST00000525257 CLUAP1Q96AJ1 413 aa29.48■■■□□ 2.31
USP47-205ENST00000525257 NOL10Q9BSC4 688 aaKnown RBP29.48■■■□□ 2.31
USP47-205ENST00000525257 MAST2Q6P0Q8 1798 aa29.48■■■□□ 2.31
USP47-205ENST00000525257 SIPA1L1O43166 1804 aa29.48■■■□□ 2.31
USP47-205ENST00000525257 TBC1D2Q9BYX2 928 aa29.47■■■□□ 2.31
USP47-205ENST00000525257 USP17L5A8MUK1 530 aa29.46■■■□□ 2.31
USP47-205ENST00000525257 BCAR3O75815 825 aa29.46■■■□□ 2.31
USP47-205ENST00000525257 GCLCP48506 637 aaPredicted RBP29.46■■■□□ 2.31
USP47-205ENST00000525257 PABPC4Q13310 644 aaKnown RBP eCLIP29.46■■■□□ 2.31
USP47-205ENST00000525257 PAK6Q9NQU5 681 aaPredicted RBP29.46■■■□□ 2.31
USP47-205ENST00000525257 SNRKQ9NRH2 765 aa29.46■■■□□ 2.31
USP47-205ENST00000525257 HERC5Q9UII4 1024 aaKnown RBP29.46■■■□□ 2.31
USP47-205ENST00000525257 ZBTB7BO15156 539 aaPredicted RBP29.45■■■□□ 2.31
USP47-205ENST00000525257 ASCC2Q9H1I8 757 aaPredicted RBP29.45■■■□□ 2.31
USP47-205ENST00000525257 AATFQ9NY61 560 aaKnown RBP eCLIP29.45■■■□□ 2.31
USP47-205ENST00000525257 TTC39AQ5SRH9 613 aa29.44■■■□□ 2.3
USP47-205ENST00000525257 NAA16Q6N069 864 aaPredicted RBP29.44■■■□□ 2.3
USP47-205ENST00000525257 AS3MTQ9HBK9 375 aa29.44■■■□□ 2.3
USP47-205ENST00000525257 CDK5RAP2Q96SN8 1893 aa29.43■■■□□ 2.3
USP47-205ENST00000525257 PRO3102Q9H379 93 aa29.43■■■□□ 2.3
USP47-205ENST00000525257 PI4KBQ9UBF8 816 aa29.43■■■□□ 2.3
USP47-205ENST00000525257 EVI5O60447 810 aa29.42■■■□□ 2.3
USP47-205ENST00000525257 SH3D19Q5HYK7 790 aa29.42■■■□□ 2.3
USP47-205ENST00000525257 MAPKAPK5Q8IW41 473 aa29.42■■■□□ 2.3
USP47-205ENST00000525257 CRISPLD2Q9H0B8 497 aa29.42■■■□□ 2.3
USP47-205ENST00000525257 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.42■■■□□ 2.3
USP47-205ENST00000525257 CCER2I3L3R5 266 aa29.41■■■□□ 2.3
USP47-205ENST00000525257 BAG3O95817 575 aa29.41■■■□□ 2.3
USP47-205ENST00000525257 MTMR2Q13614 643 aa29.41■■■□□ 2.3
USP47-205ENST00000525257 TNNI3KQ59H18 835 aa29.41■■■□□ 2.3
USP47-205ENST00000525257 TGFBRAP1Q8WUH2 860 aa29.41■■■□□ 2.3
USP47-205ENST00000525257 DBNDD2Q9BQY9 259 aa29.41■■■□□ 2.3
USP47-205ENST00000525257 DHX36Q9H2U1 1008 aaKnown RBP29.41■■■□□ 2.3
USP47-205ENST00000525257 FPGT-TNNI3KV9GXZ4 949 aa29.41■■■□□ 2.3
USP47-205ENST00000525257 MYO5AQ9Y4I1 1855 aaKnown RBP29.4■■■□□ 2.3
USP47-205ENST00000525257 HMGCRP04035 888 aa29.4■■■□□ 2.3
USP47-205ENST00000525257 CAPN2P17655 700 aa29.4■■■□□ 2.3
USP47-205ENST00000525257 OS9Q13438 667 aaPredicted RBP29.4■■■□□ 2.3
USP47-205ENST00000525257 ADGRA1Q86SQ6 560 aa29.4■■■□□ 2.3
USP47-205ENST00000525257 TMEM57Q8N5G2 664 aa29.4■■■□□ 2.3
USP47-205ENST00000525257 PAWRQ96IZ0 340 aaKnown RBP29.4■■■□□ 2.3
USP47-205ENST00000525257 FOCADQ5VW36 1801 aa29.4■■■□□ 2.3
USP47-205ENST00000525257 ALPK3Q96L96 1907 aa29.39■■■□□ 2.3
USP47-205ENST00000525257 PLCG2P16885 1265 aa29.39■■■□□ 2.3
USP47-205ENST00000525257 JAG1P78504 1218 aa29.39■■■□□ 2.3
USP47-205ENST00000525257 CCDC158Q5M9N0 1113 aa29.39■■■□□ 2.3
USP47-205ENST00000525257 DIS3LQ8TF46 1054 aaKnown RBP29.39■■■□□ 2.3
USP47-205ENST00000525257 WDR18Q9BV38 432 aa29.39■■■□□ 2.3
USP47-205ENST00000525257 GPR108Q9NPR9 543 aa29.39■■■□□ 2.3
USP47-205ENST00000525257 GJD2Q9UKL4 321 aa29.39■■■□□ 2.3
USP47-205ENST00000525257 FLT1P17948 1338 aa29.39■■■□□ 2.3
USP47-205ENST00000525257 PLXNB2O15031 1838 aa29.38■■■□□ 2.29
USP47-205ENST00000525257 CYP2E1P05181 493 aaPredicted RBP29.38■■■□□ 2.29
USP47-205ENST00000525257 IRX3P78415 501 aaPredicted RBP29.38■■■□□ 2.29
USP47-205ENST00000525257 POLA2Q14181 598 aa29.38■■■□□ 2.29
USP47-205ENST00000525257 SHROOM1Q2M3G4 852 aaPredicted RBP29.38■■■□□ 2.29
USP47-205ENST00000525257 DNAJC18Q9H819 358 aa29.38■■■□□ 2.29
USP47-205ENST00000525257 TMOD4Q9NZQ9 345 aa29.38■■■□□ 2.29
USP47-205ENST00000525257 ASNSP08243 561 aa29.37■■■□□ 2.29
USP47-205ENST00000525257 BACE1P56817 501 aa29.37■■■□□ 2.29
USP47-205ENST00000525257 PPP4CP60510 307 aa29.37■■■□□ 2.29
USP47-205ENST00000525257 TRIM32Q13049 653 aa29.37■■■□□ 2.29
USP47-205ENST00000525257 CRACR2BQ8N4Y2 399 aaPredicted RBP29.37■■■□□ 2.29
USP47-205ENST00000525257 TRIM34Q9BYJ4 488 aa29.37■■■□□ 2.29
USP47-205ENST00000525257 MORF4L1Q9UBU8 362 aa29.37■■■□□ 2.29
USP47-205ENST00000525257 PEX10O60683 326 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms