RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 PI16Q6UXB8 463 aa21.1■□□□□ 0.97
TSKU-202ENST00000525167 ZNF280CQ8ND82 737 aa21.1■□□□□ 0.97
TSKU-202ENST00000525167 U2AF1L4Q8WU68 220 aaKnown RBP21.1■□□□□ 0.97
TSKU-202ENST00000525167 DPF3Q92784 378 aa21.1■□□□□ 0.97
TSKU-202ENST00000525167 GPR108Q9NPR9 543 aa21.1■□□□□ 0.97
TSKU-202ENST00000525167 LOC285556D6RIA3 1793 aa21.1■□□□□ 0.97
TSKU-202ENST00000525167 PNMA6EA0A0J9YXQ4 647 aa21.09■□□□□ 0.97
TSKU-202ENST00000525167 CAP2P40123 477 aa21.09■□□□□ 0.97
TSKU-202ENST00000525167 MCAMP43121 646 aa21.09■□□□□ 0.97
TSKU-202ENST00000525167 GCLCP48506 637 aaPredicted RBP21.09■□□□□ 0.97
TSKU-202ENST00000525167 TBC1D9Q6ZT07 1266 aa21.09■□□□□ 0.97
TSKU-202ENST00000525167 TEX11Q8IYF3 940 aa21.09■□□□□ 0.97
TSKU-202ENST00000525167 COA7Q96BR5 231 aa21.09■□□□□ 0.97
TSKU-202ENST00000525167 NOL10Q9BSC4 688 aaKnown RBP21.09■□□□□ 0.97
TSKU-202ENST00000525167 DHX36Q9H2U1 1008 aaKnown RBP21.09■□□□□ 0.97
TSKU-202ENST00000525167 LRP2BPQ9P2M1 347 aa21.09■□□□□ 0.97
TSKU-202ENST00000525167 SGPL1O95470 568 aa21.08■□□□□ 0.97
TSKU-202ENST00000525167 PLCG2P16885 1265 aa21.08■□□□□ 0.97
TSKU-202ENST00000525167 SPP2Q13103 211 aa21.08■□□□□ 0.97
TSKU-202ENST00000525167 TREML2Q5T2D2 321 aa21.08■□□□□ 0.97
TSKU-202ENST00000525167 ANKRD13CQ8N6S4 541 aa21.08■□□□□ 0.97
TSKU-202ENST00000525167 UNC93B1Q9H1C4 597 aa21.08■□□□□ 0.97
TSKU-202ENST00000525167 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.08■□□□□ 0.97
TSKU-202ENST00000525167 MAST2Q6P0Q8 1798 aa21.08■□□□□ 0.96
TSKU-202ENST00000525167 FAM196BA6NMK8 535 aa21.07■□□□□ 0.96
TSKU-202ENST00000525167 USP17L5A8MUK1 530 aa21.07■□□□□ 0.96
TSKU-202ENST00000525167 FARP2O94887 1054 aaPredicted RBP21.07■□□□□ 0.96
TSKU-202ENST00000525167 BAG3O95817 575 aa21.07■□□□□ 0.96
TSKU-202ENST00000525167 INHAP05111 366 aa21.07■□□□□ 0.96
TSKU-202ENST00000525167 SH3D19Q5HYK7 790 aa21.07■□□□□ 0.96
TSKU-202ENST00000525167 CCDC84Q86UT8 332 aaPredicted RBP21.07■□□□□ 0.96
TSKU-202ENST00000525167 FRAT1Q92837 279 aaPredicted RBP21.07■□□□□ 0.96
TSKU-202ENST00000525167 AS3MTQ9HBK9 375 aa21.07■□□□□ 0.96
TSKU-202ENST00000525167 PI4KBQ9UBF8 816 aa21.07■□□□□ 0.96
TSKU-202ENST00000525167 NR2E3Q9Y5X4 410 aa21.07■□□□□ 0.96
TSKU-202ENST00000525167 CEP290O15078 2479 aa21.06■□□□□ 0.96
TSKU-202ENST00000525167 ELNP15502 786 aa21.06■□□□□ 0.96
TSKU-202ENST00000525167 PAK6Q9NQU5 681 aaPredicted RBP21.06■□□□□ 0.96
TSKU-202ENST00000525167 ATAD5Q96QE3 1844 aa21.06■□□□□ 0.96
TSKU-202ENST00000525167 BCAR3O75815 825 aa21.05■□□□□ 0.96
TSKU-202ENST00000525167 HMGCS2P54868 508 aa21.05■□□□□ 0.96
TSKU-202ENST00000525167 PPP4CP60510 307 aa21.05■□□□□ 0.96
TSKU-202ENST00000525167 POLA2Q14181 598 aa21.05■□□□□ 0.96
TSKU-202ENST00000525167 CCDC158Q5M9N0 1113 aa21.05■□□□□ 0.96
TSKU-202ENST00000525167 NAA16Q6N069 864 aaPredicted RBP21.05■□□□□ 0.96
TSKU-202ENST00000525167 CHRDL2Q6WN34 429 aa21.05■□□□□ 0.96
TSKU-202ENST00000525167 SH3RF3Q8TEJ3 882 aaPredicted RBP21.05■□□□□ 0.96
TSKU-202ENST00000525167 ZNF512BQ96KM6 892 aaPredicted RBP21.05■□□□□ 0.96
TSKU-202ENST00000525167 WDR18Q9BV38 432 aa21.05■□□□□ 0.96
TSKU-202ENST00000525167 GINM1Q9NU53 330 aa21.05■□□□□ 0.96
TSKU-202ENST00000525167 ASNSP08243 561 aa21.04■□□□□ 0.96
TSKU-202ENST00000525167 TNNI3KQ59H18 835 aa21.04■□□□□ 0.96
TSKU-202ENST00000525167 TTC39AQ5SRH9 613 aa21.04■□□□□ 0.96
TSKU-202ENST00000525167 ZKSCAN2Q63HK3 967 aa21.04■□□□□ 0.96
TSKU-202ENST00000525167 METTL16Q86W50 562 aaKnown RBP21.04■□□□□ 0.96
TSKU-202ENST00000525167 SSH3Q8TE77 659 aa21.04■□□□□ 0.96
TSKU-202ENST00000525167 CLUAP1Q96AJ1 413 aa21.04■□□□□ 0.96
TSKU-202ENST00000525167 FPGT-TNNI3KV9GXZ4 949 aa21.04■□□□□ 0.96
TSKU-202ENST00000525167 CRISPLD2Q9H0B8 497 aa21.03■□□□□ 0.96
TSKU-202ENST00000525167 ASCC2Q9H1I8 757 aaPredicted RBP21.03■□□□□ 0.96
TSKU-202ENST00000525167 TNNQ9UQP3 1299 aa21.03■□□□□ 0.96
TSKU-202ENST00000525167 TFRCP02786 760 aaKnown RBP21.02■□□□□ 0.96
TSKU-202ENST00000525167 RRP1BQ14684 758 aaKnown RBP21.02■□□□□ 0.96
TSKU-202ENST00000525167 FOXP4Q8IVH2 680 aaPredicted RBP21.02■□□□□ 0.96
TSKU-202ENST00000525167 TMEM57Q8N5G2 664 aa21.02■□□□□ 0.96
TSKU-202ENST00000525167 DEFB118Q96PH6 123 aa21.02■□□□□ 0.96
TSKU-202ENST00000525167 AATFQ9NY61 560 aaKnown RBP eCLIP21.02■□□□□ 0.96
TSKU-202ENST00000525167 MORF4L1Q9UBU8 362 aa21.02■□□□□ 0.96
TSKU-202ENST00000525167 ZBTB7BO15156 539 aaPredicted RBP21.01■□□□□ 0.95
TSKU-202ENST00000525167 BACE1P56817 501 aa21.01■□□□□ 0.95
TSKU-202ENST00000525167 ATP8B2P98198 1209 aa21.01■□□□□ 0.95
TSKU-202ENST00000525167 OS9Q13438 667 aaPredicted RBP21.01■□□□□ 0.95
TSKU-202ENST00000525167 DBNDD2Q9BQY9 259 aa21.01■□□□□ 0.95
TSKU-202ENST00000525167 PRO3102Q9H379 93 aa21.01■□□□□ 0.95
TSKU-202ENST00000525167 RBM27Q9P2N5 1060 aaKnown RBP21.01■□□□□ 0.95
TSKU-202ENST00000525167 SIPA1L1O43166 1804 aa21.01■□□□□ 0.95
TSKU-202ENST00000525167 FLT1P17948 1338 aa21.01■□□□□ 0.95
TSKU-202ENST00000525167 FOCADQ5VW36 1801 aa21■□□□□ 0.95
TSKU-202ENST00000525167 C19orf81C9J6K1 198 aa21■□□□□ 0.95
TSKU-202ENST00000525167 HMGCRP04035 888 aa21■□□□□ 0.95
TSKU-202ENST00000525167 CYP2E1P05181 493 aaPredicted RBP21■□□□□ 0.95
TSKU-202ENST00000525167 HOXA7P31268 230 aaPredicted RBP21■□□□□ 0.95
TSKU-202ENST00000525167 CERS3Q8IU89 383 aa21■□□□□ 0.95
TSKU-202ENST00000525167 ANKLE1Q8NAG6 615 aa21■□□□□ 0.95
TSKU-202ENST00000525167 XRN2Q9H0D6 950 aaKnown RBP eCLIP21■□□□□ 0.95
TSKU-202ENST00000525167 SNRKQ9NRH2 765 aa21■□□□□ 0.95
TSKU-202ENST00000525167 TMOD4Q9NZQ9 345 aa21■□□□□ 0.95
TSKU-202ENST00000525167 TAOK2Q9UL54 1235 aa21■□□□□ 0.95
TSKU-202ENST00000525167 NOP58Q9Y2X3 529 aaKnown RBP21■□□□□ 0.95
TSKU-202ENST00000525167 TRIOBPQ9H2D6 2365 aa21■□□□□ 0.95
TSKU-202ENST00000525167 A0A1W2PPC1 479 aa20.99■□□□□ 0.95
TSKU-202ENST00000525167 IRX3P78415 501 aaPredicted RBP20.99■□□□□ 0.95
TSKU-202ENST00000525167 MTMR2Q13614 643 aa20.99■□□□□ 0.95
TSKU-202ENST00000525167 TMED8Q6PL24 325 aaPredicted RBP20.99■□□□□ 0.95
TSKU-202ENST00000525167 CRACR2BQ8N4Y2 399 aaPredicted RBP20.99■□□□□ 0.95
TSKU-202ENST00000525167 TGFBRAP1Q8WUH2 860 aa20.99■□□□□ 0.95
TSKU-202ENST00000525167 TRIM34Q9BYJ4 488 aa20.99■□□□□ 0.95
TSKU-202ENST00000525167 GJD2Q9UKL4 321 aa20.99■□□□□ 0.95
TSKU-202ENST00000525167 RANBP2P49792 3224 aaKnown RBP20.99■□□□□ 0.95
TSKU-202ENST00000525167 EVI5O60447 810 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms