RNA–Protein interactions for RNA: ENST00000523962.5

NECAB1-206, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

TSL 3

Gene NECAB1, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-206ENST00000523962 AFG3L2Q9Y4W6 797 aa12.18□□□□□ -0.46
NECAB1-206ENST00000523962 LRRFIP2Q9Y608 721 aaKnown RBP12.18□□□□□ -0.46
NECAB1-206ENST00000523962 ZSWIM8A7E2V4 1837 aa12.18□□□□□ -0.46
NECAB1-206ENST00000523962 PHF20L1A8MW92 1017 aa12.17□□□□□ -0.46
NECAB1-206ENST00000523962 INHAP05111 366 aa12.17□□□□□ -0.46
NECAB1-206ENST00000523962 IRF5Q13568 498 aa12.17□□□□□ -0.46
NECAB1-206ENST00000523962 IFNLR1Q8IU57 520 aaPredicted RBP12.17□□□□□ -0.46
NECAB1-206ENST00000523962 ZSCAN29Q8IWY8 852 aaPredicted RBP12.17□□□□□ -0.46
NECAB1-206ENST00000523962 MRPL50Q8N5N7 158 aaKnown RBP12.17□□□□□ -0.46
NECAB1-206ENST00000523962 USP44Q9H0E7 712 aa12.17□□□□□ -0.46
NECAB1-206ENST00000523962 TAOK2Q9UL54 1235 aa12.17□□□□□ -0.46
NECAB1-206ENST00000523962 SLC45A1Q9Y2W3 748 aa12.17□□□□□ -0.46
NECAB1-206ENST00000523962 CACNA1FO60840 1977 aa12.17□□□□□ -0.46
NECAB1-206ENST00000523962 CEP290O15078 2479 aa12.17□□□□□ -0.46
NECAB1-206ENST00000523962 ENTPD3O75355 529 aa12.16□□□□□ -0.46
NECAB1-206ENST00000523962 HOXB1P14653 301 aaPredicted RBP12.16□□□□□ -0.46
NECAB1-206ENST00000523962 RFX5P48382 616 aaPredicted RBP12.16□□□□□ -0.46
NECAB1-206ENST00000523962 RGS3P49796 1198 aa12.16□□□□□ -0.46
NECAB1-206ENST00000523962 SMCR8Q8TEV9 937 aaPredicted RBP12.16□□□□□ -0.46
NECAB1-206ENST00000523962 COA7Q96BR5 231 aa12.16□□□□□ -0.46
NECAB1-206ENST00000523962 PAWRQ96IZ0 340 aaKnown RBP12.16□□□□□ -0.46
NECAB1-206ENST00000523962 CEP126Q9P2H0 1117 aa12.16□□□□□ -0.46
NECAB1-206ENST00000523962 DENND2AQ9ULE3 1009 aa12.16□□□□□ -0.46
NECAB1-206ENST00000523962 SOX1O00570 391 aaPredicted RBP12.15□□□□□ -0.46
NECAB1-206ENST00000523962 CTNND1O60716 968 aaKnown RBP12.15□□□□□ -0.46
NECAB1-206ENST00000523962 MAP3K10Q02779 954 aa12.15□□□□□ -0.46
NECAB1-206ENST00000523962 ATP2B3Q16720 1220 aa12.15□□□□□ -0.46
NECAB1-206ENST00000523962 ATG9AQ7Z3C6 839 aa12.15□□□□□ -0.46
NECAB1-206ENST00000523962 NECAB2Q7Z6G3 386 aa12.15□□□□□ -0.46
NECAB1-206ENST00000523962 ZNF710Q8N1W2 664 aa12.15□□□□□ -0.46
NECAB1-206ENST00000523962 LRCH3Q96II8 777 aa12.15□□□□□ -0.46
NECAB1-206ENST00000523962 IDI2Q9BXS1 227 aa12.15□□□□□ -0.46
NECAB1-206ENST00000523962 PTPRCP08575 1304 aa12.14□□□□□ -0.47
NECAB1-206ENST00000523962 TRIM75PA6NK02 468 aa12.14□□□□□ -0.47
NECAB1-206ENST00000523962 SH3BP5LQ7L8J4 393 aa12.14□□□□□ -0.47
NECAB1-206ENST00000523962 ZGPATQ8N5A5 531 aaKnown RBP12.14□□□□□ -0.47
NECAB1-206ENST00000523962 ANKRD13CQ8N6S4 541 aa12.14□□□□□ -0.47
NECAB1-206ENST00000523962 CRISPLD2Q9H0B8 497 aa12.14□□□□□ -0.47
NECAB1-206ENST00000523962 SIL1Q9H173 461 aa12.14□□□□□ -0.47
NECAB1-206ENST00000523962 PAK6Q9NQU5 681 aaPredicted RBP12.14□□□□□ -0.47
NECAB1-206ENST00000523962 SALL1Q9NSC2 1324 aa12.13□□□□□ -0.47
NECAB1-206ENST00000523962 DDTLA6NHG4 134 aaPredicted RBP12.13□□□□□ -0.47
NECAB1-206ENST00000523962 SEMA3EO15041 775 aa12.13□□□□□ -0.47
NECAB1-206ENST00000523962 SLURP2P0DP57 97 aa12.13□□□□□ -0.47
NECAB1-206ENST00000523962 PHKA1P46020 1223 aa12.13□□□□□ -0.47
NECAB1-206ENST00000523962 SLF2Q8IX21 1173 aa12.13□□□□□ -0.47
NECAB1-206ENST00000523962 FAM9BQ8IZU0 186 aa12.13□□□□□ -0.47
NECAB1-206ENST00000523962 AGTPBP1Q9UPW5 1226 aa12.13□□□□□ -0.47
NECAB1-206ENST00000523962 SZT2Q5T011 3432 aa12.12□□□□□ -0.47
NECAB1-206ENST00000523962 ANP32CO43423 234 aa12.12□□□□□ -0.47
NECAB1-206ENST00000523962 CIAO1O76071 339 aa12.12□□□□□ -0.47
NECAB1-206ENST00000523962 BMP8BP34820 402 aa12.12□□□□□ -0.47
NECAB1-206ENST00000523962 PICALMQ13492 652 aa12.12□□□□□ -0.47
NECAB1-206ENST00000523962 CCDC84Q86UT8 332 aaPredicted RBP12.12□□□□□ -0.47
NECAB1-206ENST00000523962 DZIP1Q86YF9 867 aaKnown RBP12.12□□□□□ -0.47
NECAB1-206ENST00000523962 ANKLE1Q8NAG6 615 aa12.12□□□□□ -0.47
NECAB1-206ENST00000523962 GDF15Q99988 308 aa12.12□□□□□ -0.47
NECAB1-206ENST00000523962 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.12□□□□□ -0.47
NECAB1-206ENST00000523962 ABCF2Q9UG63 623 aa12.12□□□□□ -0.47
NECAB1-206ENST00000523962 PNMA3Q9UL41 463 aa12.12□□□□□ -0.47
NECAB1-206ENST00000523962 ATRNL1Q5VV63 1379 aa12.12□□□□□ -0.47
NECAB1-206ENST00000523962 GAKO14976 1311 aa12.11□□□□□ -0.47
NECAB1-206ENST00000523962 FAM110CQ1W6H9 321 aa12.11□□□□□ -0.47
NECAB1-206ENST00000523962 TREML2Q5T2D2 321 aa12.11□□□□□ -0.47
NECAB1-206ENST00000523962 SPTY2D1Q68D10 685 aaPredicted RBP12.11□□□□□ -0.47
NECAB1-206ENST00000523962 CCDC102BQ68D86 513 aa12.11□□□□□ -0.47
NECAB1-206ENST00000523962 C7orf61Q8IZ16 206 aa12.11□□□□□ -0.47
NECAB1-206ENST00000523962 DIS3LQ8TF46 1054 aaKnown RBP12.11□□□□□ -0.47
NECAB1-206ENST00000523962 SSH1Q8WYL5 1049 aa12.11□□□□□ -0.47
NECAB1-206ENST00000523962 NBPF3Q9H094 633 aa12.11□□□□□ -0.47
NECAB1-206ENST00000523962 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.11□□□□□ -0.47
NECAB1-206ENST00000523962 HMX1Q9NP08 348 aaPredicted RBP12.11□□□□□ -0.47
NECAB1-206ENST00000523962 DDX4Q9NQI0 724 aaKnown RBP12.11□□□□□ -0.47
NECAB1-206ENST00000523962 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.11□□□□□ -0.47
NECAB1-206ENST00000523962 ZMYND8Q9ULU4 1186 aaPredicted RBP12.11□□□□□ -0.47
NECAB1-206ENST00000523962 RPTORQ8N122 1335 aa12.11□□□□□ -0.47
NECAB1-206ENST00000523962 TBC1D12O60347 775 aa12.1□□□□□ -0.47
NECAB1-206ENST00000523962 HMGCRP04035 888 aa12.1□□□□□ -0.47
NECAB1-206ENST00000523962 UBTFL1P0CB47 393 aaPredicted RBP12.1□□□□□ -0.47
NECAB1-206ENST00000523962 ADORA1P30542 326 aa12.1□□□□□ -0.47
NECAB1-206ENST00000523962 IL15P40933 162 aaPredicted RBP12.1□□□□□ -0.47
NECAB1-206ENST00000523962 BTDP43251 543 aa12.1□□□□□ -0.47
NECAB1-206ENST00000523962 GCLCP48506 637 aaPredicted RBP12.1□□□□□ -0.47
NECAB1-206ENST00000523962 TIMM10P62072 90 aa12.1□□□□□ -0.47
NECAB1-206ENST00000523962 SPP2Q13103 211 aa12.1□□□□□ -0.47
NECAB1-206ENST00000523962 PABPC4Q13310 644 aaKnown RBP eCLIP12.1□□□□□ -0.47
NECAB1-206ENST00000523962 GPR153Q6NV75 609 aa12.1□□□□□ -0.47
NECAB1-206ENST00000523962 PROCA1Q8NCQ7 364 aaPredicted RBP12.1□□□□□ -0.47
NECAB1-206ENST00000523962 GJD2Q9UKL4 321 aa12.1□□□□□ -0.47
NECAB1-206ENST00000523962 ERICH6Q7L0X2 663 aa12.09□□□□□ -0.47
NECAB1-206ENST00000523962 DEFB123Q8N688 67 aa12.09□□□□□ -0.47
NECAB1-206ENST00000523962 ZNF280CQ8ND82 737 aa12.09□□□□□ -0.47
NECAB1-206ENST00000523962 OSBPL5Q9H0X9 879 aaPredicted RBP12.09□□□□□ -0.47
NECAB1-206ENST00000523962 PA2G4Q9UQ80 394 aaKnown RBP12.09□□□□□ -0.47
NECAB1-206ENST00000523962 AK9Q5TCS8 1911 aa12.09□□□□□ -0.47
NECAB1-206ENST00000523962 GPR75-ASB3A0A0A6YYF3 556 aa12.08□□□□□ -0.48
NECAB1-206ENST00000523962 FAM196BA6NMK8 535 aa12.08□□□□□ -0.48
NECAB1-206ENST00000523962 SYN1P17600 705 aa12.08□□□□□ -0.48
NECAB1-206ENST00000523962 HMGCS2P54868 508 aa12.08□□□□□ -0.48
NECAB1-206ENST00000523962 TRIM32Q13049 653 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms