RNA–Protein interactions for RNA: ENST00000523543.1

CDK16-221, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-221ENST00000523543 C16orf86Q6ZW13 317 aa13.31□□□□□ -0.28
CDK16-221ENST00000523543 CDC37L1Q7L3B6 337 aa13.31□□□□□ -0.28
CDK16-221ENST00000523543 ZSCAN29Q8IWY8 852 aaPredicted RBP13.31□□□□□ -0.28
CDK16-221ENST00000523543 RASEFQ8IZ41 740 aa13.31□□□□□ -0.28
CDK16-221ENST00000523543 TBC1D32Q96NH3 1257 aa13.31□□□□□ -0.28
CDK16-221ENST00000523543 SERPINB13Q9UIV8 391 aa13.31□□□□□ -0.28
CDK16-221ENST00000523543 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDK16-221ENST00000523543 SSC5DA1L4H1 1573 aa13.3□□□□□ -0.28
CDK16-221ENST00000523543 TBC1D12O60347 775 aa13.3□□□□□ -0.28
CDK16-221ENST00000523543 ANAPC15P60006 121 aa13.3□□□□□ -0.28
CDK16-221ENST00000523543 SLC4A8Q2Y0W8 1093 aa13.3□□□□□ -0.28
CDK16-221ENST00000523543 NBPF12Q5TAG4 269 aaPredicted RBP13.3□□□□□ -0.28
CDK16-221ENST00000523543 MAP1SQ66K74 1059 aaPredicted RBP13.3□□□□□ -0.28
CDK16-221ENST00000523543 USP48Q86UV5 1035 aa13.3□□□□□ -0.28
CDK16-221ENST00000523543 FOXP4Q8IVH2 680 aaPredicted RBP13.3□□□□□ -0.28
CDK16-221ENST00000523543 ZNF784Q8NCA9 323 aaPredicted RBP13.3□□□□□ -0.28
CDK16-221ENST00000523543 DYNLL2Q96FJ2 89 aa13.3□□□□□ -0.28
CDK16-221ENST00000523543 GLIS2Q9BZE0 524 aaPredicted RBP13.3□□□□□ -0.28
CDK16-221ENST00000523543 C22orf23Q9BZE7 217 aa13.3□□□□□ -0.28
CDK16-221ENST00000523543 DNAJC18Q9H819 358 aa13.3□□□□□ -0.28
CDK16-221ENST00000523543 HERC5Q9UII4 1024 aaKnown RBP13.3□□□□□ -0.28
CDK16-221ENST00000523543 CLEC11AQ9Y240 323 aa13.3□□□□□ -0.28
CDK16-221ENST00000523543 TACC3Q9Y6A5 838 aa13.3□□□□□ -0.28
CDK16-221ENST00000523543 ORC4O43929 436 aa13.29□□□□□ -0.28
CDK16-221ENST00000523543 SLC3A2P08195 630 aaKnown RBP13.29□□□□□ -0.28
CDK16-221ENST00000523543 ZKSCAN1P17029 563 aaPredicted RBP13.29□□□□□ -0.28
CDK16-221ENST00000523543 CTDSPL2Q05D32 466 aa13.29□□□□□ -0.28
CDK16-221ENST00000523543 AKNAD1Q5T1N1 836 aa13.29□□□□□ -0.28
CDK16-221ENST00000523543 CHADLQ6NUI6 762 aa13.29□□□□□ -0.28
CDK16-221ENST00000523543 STOX1Q6ZVD7 989 aa13.29□□□□□ -0.28
CDK16-221ENST00000523543 SLC44A5Q8NCS7 719 aa13.29□□□□□ -0.28
CDK16-221ENST00000523543 HOOK2Q96ED9 719 aa13.29□□□□□ -0.28
CDK16-221ENST00000523543 RNF41Q9H4P4 317 aaPredicted RBP13.29□□□□□ -0.28
CDK16-221ENST00000523543 SWAP70Q9UH65 585 aa13.29□□□□□ -0.28
CDK16-221ENST00000523543 SNX14Q9Y5W7 946 aa13.29□□□□□ -0.28
CDK16-221ENST00000523543 LAMA4Q16363 1823 aa13.29□□□□□ -0.28
CDK16-221ENST00000523543 LAMB1P07942 1786 aa13.28□□□□□ -0.28
CDK16-221ENST00000523543 SIPA1L1O43166 1804 aa13.28□□□□□ -0.28
CDK16-221ENST00000523543 E7EWF7 191 aa13.28□□□□□ -0.28
CDK16-221ENST00000523543 SHMT1P34896 483 aa13.28□□□□□ -0.28
CDK16-221ENST00000523543 CDK8P49336 464 aa13.28□□□□□ -0.28
CDK16-221ENST00000523543 NT5C2P49902 561 aa13.28□□□□□ -0.28
CDK16-221ENST00000523543 PDE4BQ07343 736 aa13.28□□□□□ -0.28
CDK16-221ENST00000523543 KRT32Q14532 448 aa13.28□□□□□ -0.28
CDK16-221ENST00000523543 SUPT20HL1Q3ZLR7 823 aa13.28□□□□□ -0.28
CDK16-221ENST00000523543 PRAMEF18Q5VWM3 479 aa13.28□□□□□ -0.28
CDK16-221ENST00000523543 DLK2Q6UY11 383 aa13.28□□□□□ -0.28
CDK16-221ENST00000523543 CDCA5Q96FF9 252 aa13.28□□□□□ -0.28
CDK16-221ENST00000523543 ZNF287Q9HBT7 754 aa13.28□□□□□ -0.28
CDK16-221ENST00000523543 BAZ2AQ9UIF9 1905 aaKnown RBP13.28□□□□□ -0.28
CDK16-221ENST00000523543 NEDD4P46934 1319 aa13.28□□□□□ -0.28
CDK16-221ENST00000523543 SLURP2P0DP57 97 aa13.27□□□□□ -0.29
CDK16-221ENST00000523543 DCAF15Q66K64 600 aa13.27□□□□□ -0.29
CDK16-221ENST00000523543 TATDN1Q6P1N9 297 aa13.27□□□□□ -0.29
CDK16-221ENST00000523543 MFSD6Q6ZSS7 791 aa13.27□□□□□ -0.29
CDK16-221ENST00000523543 CRACR2BQ8N4Y2 399 aaPredicted RBP13.27□□□□□ -0.29
CDK16-221ENST00000523543 CNNM2Q9H8M5 875 aa13.27□□□□□ -0.29
CDK16-221ENST00000523543 INCENPQ9NQS7 918 aa13.27□□□□□ -0.29
CDK16-221ENST00000523543 MYH1P12882 1939 aa13.27□□□□□ -0.29
CDK16-221ENST00000523543 FAM196BA6NMK8 535 aa13.26□□□□□ -0.29
CDK16-221ENST00000523543 PHF20L1A8MW92 1017 aa13.26□□□□□ -0.29
CDK16-221ENST00000523543 TRAF5O00463 557 aa13.26□□□□□ -0.29
CDK16-221ENST00000523543 ITGBL1O95965 494 aaPredicted RBP13.26□□□□□ -0.29
CDK16-221ENST00000523543 RASA1P20936 1047 aa13.26□□□□□ -0.29
CDK16-221ENST00000523543 ADCK5Q3MIX3 580 aa13.26□□□□□ -0.29
CDK16-221ENST00000523543 RBM46Q8TBY0 533 aaKnown RBP13.26□□□□□ -0.29
CDK16-221ENST00000523543 KIF2CQ99661 725 aa13.26□□□□□ -0.29
CDK16-221ENST00000523543 TRIM34Q9BYJ4 488 aa13.26□□□□□ -0.29
CDK16-221ENST00000523543 TM6SF1Q9BZW5 370 aa13.26□□□□□ -0.29
CDK16-221ENST00000523543 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.26□□□□□ -0.29
CDK16-221ENST00000523543 ZNF112Q9UJU3 913 aa13.26□□□□□ -0.29
CDK16-221ENST00000523543 PLIN4Q96Q06 1357 aa13.25□□□□□ -0.29
CDK16-221ENST00000523543 PRDM1O75626 825 aa13.25□□□□□ -0.29
CDK16-221ENST00000523543 TOMM70O94826 608 aa13.25□□□□□ -0.29
CDK16-221ENST00000523543 NF2P35240 595 aa13.25□□□□□ -0.29
CDK16-221ENST00000523543 TRDNQ13061 729 aa13.25□□□□□ -0.29
CDK16-221ENST00000523543 COL9A3Q14050 684 aaPredicted RBP13.25□□□□□ -0.29
CDK16-221ENST00000523543 RRP1BQ14684 758 aaKnown RBP13.25□□□□□ -0.29
CDK16-221ENST00000523543 MIGA2Q7L4E1 593 aa13.25□□□□□ -0.29
CDK16-221ENST00000523543 MB21D2Q8IYB1 491 aaPredicted RBP13.25□□□□□ -0.29
CDK16-221ENST00000523543 STK11IPQ8N1F8 1099 aa13.25□□□□□ -0.29
CDK16-221ENST00000523543 NKX2-3Q8TAU0 364 aa13.25□□□□□ -0.29
CDK16-221ENST00000523543 ESR2Q92731 530 aa13.25□□□□□ -0.29
CDK16-221ENST00000523543 CCDC17Q96LX7 622 aa13.25□□□□□ -0.29
CDK16-221ENST00000523543 JAKMIP1Q96N16 626 aaKnown RBP13.25□□□□□ -0.29
CDK16-221ENST00000523543 ZNF341Q9BYN7 854 aa13.25□□□□□ -0.29
CDK16-221ENST00000523543 KRT23Q9C075 422 aa13.25□□□□□ -0.29
CDK16-221ENST00000523543 MKNK2Q9HBH9 465 aa13.25□□□□□ -0.29
CDK16-221ENST00000523543 B4E1Z4 1266 aa13.24□□□□□ -0.29
CDK16-221ENST00000523543 PSMA5P28066 241 aa13.24□□□□□ -0.29
CDK16-221ENST00000523543 MAP3K11Q16584 847 aa13.24□□□□□ -0.29
CDK16-221ENST00000523543 RALYLQ86SE5 291 aaKnown RBP13.24□□□□□ -0.29
CDK16-221ENST00000523543 SMC1BQ8NDV3 1235 aa13.24□□□□□ -0.29
CDK16-221ENST00000523543 NCOA7Q8NI08 942 aa13.24□□□□□ -0.29
CDK16-221ENST00000523543 KLRG1Q96E93 195 aa13.24□□□□□ -0.29
CDK16-221ENST00000523543 NEK1Q96PY6 1258 aa13.24□□□□□ -0.29
CDK16-221ENST00000523543 ZSWIM6Q9HCJ5 1215 aa13.24□□□□□ -0.29
CDK16-221ENST00000523543 PASKQ96RG2 1323 aa13.23□□□□□ -0.29
CDK16-221ENST00000523543 PPP1R12BO60237 982 aaPredicted RBP13.23□□□□□ -0.29
CDK16-221ENST00000523543 KDM4AO75164 1064 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms