RNA–Protein interactions for RNA: ENST00000520485.5

ARFGAP1-214, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-214ENST00000520485 GLIS2Q9BZE0 524 aaPredicted RBP27.31■■□□□ 1.96
ARFGAP1-214ENST00000520485 PGAP2Q9UHJ9 254 aa27.31■■□□□ 1.96
ARFGAP1-214ENST00000520485 SNX14Q9Y5W7 946 aa27.31■■□□□ 1.96
ARFGAP1-214ENST00000520485 ZC3H15Q8WU90 426 aaKnown RBP27.3■■□□□ 1.96
ARFGAP1-214ENST00000520485 NEDD4P46934 1319 aa27.3■■□□□ 1.96
ARFGAP1-214ENST00000520485 EPB41L2O43491 1005 aaKnown RBP27.29■■□□□ 1.96
ARFGAP1-214ENST00000520485 PRDM1O75626 825 aa27.29■■□□□ 1.96
ARFGAP1-214ENST00000520485 ROBO3Q96MS0 1386 aa27.29■■□□□ 1.96
ARFGAP1-214ENST00000520485 TBC1D32Q96NH3 1257 aa27.29■■□□□ 1.96
ARFGAP1-214ENST00000520485 COL9A3Q14050 684 aaPredicted RBP27.28■■□□□ 1.96
ARFGAP1-214ENST00000520485 NBPF12Q5TAG4 269 aaPredicted RBP27.28■■□□□ 1.96
ARFGAP1-214ENST00000520485 RNF20Q5VTR2 975 aa27.28■■□□□ 1.96
ARFGAP1-214ENST00000520485 TTC6Q86TZ1 520 aa27.28■■□□□ 1.96
ARFGAP1-214ENST00000520485 NKX2-3Q8TAU0 364 aa27.28■■□□□ 1.96
ARFGAP1-214ENST00000520485 DHX36Q9H2U1 1008 aaKnown RBP27.28■■□□□ 1.96
ARFGAP1-214ENST00000520485 SSC5DA1L4H1 1573 aa27.28■■□□□ 1.96
ARFGAP1-214ENST00000520485 ADCK5Q3MIX3 580 aa27.27■■□□□ 1.96
ARFGAP1-214ENST00000520485 MIGA2Q7L4E1 593 aa27.27■■□□□ 1.96
ARFGAP1-214ENST00000520485 LDHDQ86WU2 507 aa27.27■■□□□ 1.96
ARFGAP1-214ENST00000520485 DNAJC18Q9H819 358 aa27.27■■□□□ 1.96
ARFGAP1-214ENST00000520485 ANAPC4Q9UJX5 808 aa27.27■■□□□ 1.96
ARFGAP1-214ENST00000520485 E7EWF7 191 aa27.26■■□□□ 1.96
ARFGAP1-214ENST00000520485 RRP12Q5JTH9 1297 aaKnown RBP27.26■■□□□ 1.96
ARFGAP1-214ENST00000520485 CRACR2BQ8N4Y2 399 aaPredicted RBP27.26■■□□□ 1.96
ARFGAP1-214ENST00000520485 TOMM22Q9NS69 142 aa27.26■■□□□ 1.96
ARFGAP1-214ENST00000520485 PI4KBQ9UBF8 816 aa27.26■■□□□ 1.96
ARFGAP1-214ENST00000520485 FZD1Q9UP38 647 aa27.26■■□□□ 1.96
ARFGAP1-214ENST00000520485 ZKSCAN1P17029 563 aaPredicted RBP27.26■■□□□ 1.95
ARFGAP1-214ENST00000520485 KCNB2Q92953 911 aa27.26■■□□□ 1.95
ARFGAP1-214ENST00000520485 SERPINB13Q9UIV8 391 aa27.26■■□□□ 1.95
ARFGAP1-214ENST00000520485 TRAF5O00463 557 aa27.25■■□□□ 1.95
ARFGAP1-214ENST00000520485 FMR1Q06787 632 aaKnown RBP eCLIP27.25■■□□□ 1.95
ARFGAP1-214ENST00000520485 AKNAD1Q5T1N1 836 aa27.25■■□□□ 1.95
ARFGAP1-214ENST00000520485 C16orf86Q6ZW13 317 aa27.25■■□□□ 1.95
ARFGAP1-214ENST00000520485 STAG1Q8WVM7 1258 aa27.25■■□□□ 1.95
ARFGAP1-214ENST00000520485 TRIM34Q9BYJ4 488 aa27.25■■□□□ 1.95
ARFGAP1-214ENST00000520485 RBM25P49756 843 aaKnown RBP27.24■■□□□ 1.95
ARFGAP1-214ENST00000520485 GABPAQ06546 454 aa27.24■■□□□ 1.95
ARFGAP1-214ENST00000520485 CDCA5Q96FF9 252 aa27.24■■□□□ 1.95
ARFGAP1-214ENST00000520485 JAKMIP1Q96N16 626 aaKnown RBP27.24■■□□□ 1.95
ARFGAP1-214ENST00000520485 PPP2R3BQ9Y5P8 575 aa27.24■■□□□ 1.95
ARFGAP1-214ENST00000520485 KIF3CO14782 793 aa27.23■■□□□ 1.95
ARFGAP1-214ENST00000520485 SLC3A2P08195 630 aaKnown RBP27.23■■□□□ 1.95
ARFGAP1-214ENST00000520485 CPA1P15085 419 aa27.23■■□□□ 1.95
ARFGAP1-214ENST00000520485 CDK8P49336 464 aa27.23■■□□□ 1.95
ARFGAP1-214ENST00000520485 MFSD6Q6ZSS7 791 aa27.23■■□□□ 1.95
ARFGAP1-214ENST00000520485 EHD4Q9H223 541 aa27.23■■□□□ 1.95
ARFGAP1-214ENST00000520485 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.23■■□□□ 1.95
ARFGAP1-214ENST00000520485 MYH8P13535 1937 aa27.23■■□□□ 1.95
ARFGAP1-214ENST00000520485 PRKG1Q13976 671 aa27.22■■□□□ 1.95
ARFGAP1-214ENST00000520485 SHROOM1Q2M3G4 852 aaPredicted RBP27.22■■□□□ 1.95
ARFGAP1-214ENST00000520485 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.22■■□□□ 1.952e-7■■■■■ 28.9
ARFGAP1-214ENST00000520485 B4E1Z4 1266 aa27.21■■□□□ 1.95
ARFGAP1-214ENST00000520485 SHMT1P34896 483 aa27.21■■□□□ 1.95
ARFGAP1-214ENST00000520485 CDC37L1Q7L3B6 337 aa27.21■■□□□ 1.95
ARFGAP1-214ENST00000520485 PDE4BQ07343 736 aa27.21■■□□□ 1.95
ARFGAP1-214ENST00000520485 ZNF784Q8NCA9 323 aaPredicted RBP27.21■■□□□ 1.95
ARFGAP1-214ENST00000520485 KIF2CQ99661 725 aa27.21■■□□□ 1.95
ARFGAP1-214ENST00000520485 MKNK2Q9HBH9 465 aa27.21■■□□□ 1.95
ARFGAP1-214ENST00000520485 FAM47AQ5JRC9 791 aa27.2■■□□□ 1.94
ARFGAP1-214ENST00000520485 CHST3Q7LGC8 479 aa27.2■■□□□ 1.94
ARFGAP1-214ENST00000520485 UPF3BQ9BZI7 483 aaKnown RBP27.2■■□□□ 1.94
ARFGAP1-214ENST00000520485 RNF41Q9H4P4 317 aaPredicted RBP27.2■■□□□ 1.94
ARFGAP1-214ENST00000520485 ZNF408Q9H9D4 720 aa27.2■■□□□ 1.94
ARFGAP1-214ENST00000520485 RANBP6O60518 1105 aaKnown RBP27.19■■□□□ 1.94
ARFGAP1-214ENST00000520485 GDF11O95390 407 aa27.19■■□□□ 1.94
ARFGAP1-214ENST00000520485 CASTP20810 708 aaKnown RBP27.19■■□□□ 1.94
ARFGAP1-214ENST00000520485 RASA1P20936 1047 aa27.19■■□□□ 1.94
ARFGAP1-214ENST00000520485 RRP1BQ14684 758 aaKnown RBP27.19■■□□□ 1.94
ARFGAP1-214ENST00000520485 TSGA10IPQ3SY00 556 aa27.19■■□□□ 1.94
ARFGAP1-214ENST00000520485 CHADLQ6NUI6 762 aa27.19■■□□□ 1.94
ARFGAP1-214ENST00000520485 TCEANC2Q96MN5 208 aa27.19■■□□□ 1.94
ARFGAP1-214ENST00000520485 KDM4AO75164 1064 aa27.18■■□□□ 1.94
ARFGAP1-214ENST00000520485 ANAPC15P60006 121 aa27.18■■□□□ 1.94
ARFGAP1-214ENST00000520485 KRT32Q14532 448 aa27.18■■□□□ 1.94
ARFGAP1-214ENST00000520485 RALYLQ86SE5 291 aaKnown RBP27.18■■□□□ 1.94
ARFGAP1-214ENST00000520485 FOXP4Q8IVH2 680 aaPredicted RBP27.18■■□□□ 1.94
ARFGAP1-214ENST00000520485 TRDNQ13061 729 aa27.17■■□□□ 1.94
ARFGAP1-214ENST00000520485 CYB5R4Q7L1T6 521 aa27.17■■□□□ 1.94
ARFGAP1-214ENST00000520485 METTL16Q86W50 562 aaKnown RBP27.17■■□□□ 1.94
ARFGAP1-214ENST00000520485 MB21D2Q8IYB1 491 aaPredicted RBP27.17■■□□□ 1.94
ARFGAP1-214ENST00000520485 NCOA7Q8NI08 942 aa27.17■■□□□ 1.94
ARFGAP1-214ENST00000520485 NEK1Q96PY6 1258 aa27.17■■□□□ 1.94
ARFGAP1-214ENST00000520485 SWAP70Q9UH65 585 aa27.17■■□□□ 1.94
ARFGAP1-214ENST00000520485 HERC5Q9UII4 1024 aaKnown RBP27.17■■□□□ 1.94
ARFGAP1-214ENST00000520485 ORC4O43929 436 aa27.16■■□□□ 1.94
ARFGAP1-214ENST00000520485 FGRP09769 529 aa27.16■■□□□ 1.94
ARFGAP1-214ENST00000520485 AKR1B1P15121 316 aa27.16■■□□□ 1.94
ARFGAP1-214ENST00000520485 SUPT20HL1Q3ZLR7 823 aa27.16■■□□□ 1.94
ARFGAP1-214ENST00000520485 ZKSCAN3Q9BRR0 538 aa27.16■■□□□ 1.94
ARFGAP1-214ENST00000520485 LRRC2Q9BYS8 371 aa27.16■■□□□ 1.94
ARFGAP1-214ENST00000520485 KRT23Q9C075 422 aa27.16■■□□□ 1.94
ARFGAP1-214ENST00000520485 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.16■■□□□ 1.94
ARFGAP1-214ENST00000520485 MPHOSPH10O00566 681 aaKnown RBP27.15■■□□□ 1.94
ARFGAP1-214ENST00000520485 DCAF15Q66K64 600 aa27.15■■□□□ 1.94
ARFGAP1-214ENST00000520485 MOB2Q70IA6 237 aa27.15■■□□□ 1.94
ARFGAP1-214ENST00000520485 CNNM2Q9H8M5 875 aa27.15■■□□□ 1.94
ARFGAP1-214ENST00000520485 TSPY2A6NKD2 308 aa27.14■■□□□ 1.94
ARFGAP1-214ENST00000520485 TBC1D12O60347 775 aa27.14■■□□□ 1.94
ARFGAP1-214ENST00000520485 ANTXR2P58335 489 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms