RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 ADAMTSL4Q6UY14 1074 aa9.17□□□□□ -0.94
CLK4-202ENST00000519132 LIAT1Q6ZQX7 453 aa9.17□□□□□ -0.94
CLK4-202ENST00000519132 STK35Q8TDR2 534 aa9.17□□□□□ -0.94
CLK4-202ENST00000519132 LIN7BQ9HAP6 207 aa9.17□□□□□ -0.94
CLK4-202ENST00000519132 POU4F2Q12837 409 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 TSHZ1Q6ZSZ6 1077 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 GRIN3AQ8TCU5 1115 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 GPAMQ9HCL2 828 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 DZANK1Q9NVP4 752 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 ZMYM3Q14202 1370 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 TMEM131LA2VDJ0 1609 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 TMEM238LA0A1B0GVL6 79 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 MMP20O60882 483 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 EXOSC10Q01780 885 aaKnown RBP9.16□□□□□ -0.94
CLK4-202ENST00000519132 NR5A1Q13285 461 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 PNMA2Q9UL42 364 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 HCN2Q9UL51 889 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 KCNQ2O43526 872 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 CTSOP43234 321 aaPredicted RBP9.16□□□□□ -0.94
CLK4-202ENST00000519132 NFKB2Q00653 900 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 PWP1Q13610 501 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 MADDQ8WXG6 1647 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 CEP63Q96MT8 703 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 ZFATQ9P243 1243 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 KIAA1210Q9ULL0 1709 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 MYO5BQ9ULV0 1848 aa9.16□□□□□ -0.94
CLK4-202ENST00000519132 KAT6BQ8WYB5 2073 aa9.15□□□□□ -0.94
CLK4-202ENST00000519132 TRPM1Q7Z4N2 1603 aa9.15□□□□□ -0.94
CLK4-202ENST00000519132 MYOM2P54296 1465 aa9.15□□□□□ -0.94
CLK4-202ENST00000519132 CNGB1Q14028 1251 aaPredicted RBP9.15□□□□□ -0.94
CLK4-202ENST00000519132 AGMOQ6ZNB7 445 aa9.15□□□□□ -0.94
CLK4-202ENST00000519132 TRIM42Q8IWZ5 723 aa9.15□□□□□ -0.94
CLK4-202ENST00000519132 PGPEP1Q9NXJ5 209 aa9.15□□□□□ -0.94
CLK4-202ENST00000519132 NOB1Q9ULX3 412 aaKnown RBP9.15□□□□□ -0.94
CLK4-202ENST00000519132 FAM221AA4D161 298 aa9.15□□□□□ -0.95
CLK4-202ENST00000519132 RBAK-RBAKDNI3L0D1 243 aa9.15□□□□□ -0.95
CLK4-202ENST00000519132 TSPAN6O43657 245 aa9.15□□□□□ -0.95
CLK4-202ENST00000519132 NEFMP07197 916 aa9.15□□□□□ -0.95
CLK4-202ENST00000519132 RHOQP17081 205 aa9.15□□□□□ -0.95
CLK4-202ENST00000519132 STAT3P40763 770 aa9.15□□□□□ -0.95
CLK4-202ENST00000519132 NFE2Q16621 373 aaPredicted RBP9.15□□□□□ -0.95
CLK4-202ENST00000519132 NSUN5Q96P11 429 aaKnown RBP9.15□□□□□ -0.95
CLK4-202ENST00000519132 KLF16Q9BXK1 252 aaPredicted RBP9.15□□□□□ -0.95
CLK4-202ENST00000519132 ZIM2Q9NZV7 527 aa9.15□□□□□ -0.95
CLK4-202ENST00000519132 FNDC3AQ9Y2H6 1198 aaKnown RBP9.15□□□□□ -0.95
CLK4-202ENST00000519132 LAMC1P11047 1609 aa9.15□□□□□ -0.95
CLK4-202ENST00000519132 UPK3BL1B0FP48 263 aa9.14□□□□□ -0.95
CLK4-202ENST00000519132 UPK3BL2E5RIL1 263 aa9.14□□□□□ -0.95
CLK4-202ENST00000519132 MCL1Q07820 350 aa9.14□□□□□ -0.95
CLK4-202ENST00000519132 Q6ZVU0 165 aa9.14□□□□□ -0.95
CLK4-202ENST00000519132 SLC39A13Q96H72 371 aa9.14□□□□□ -0.95
CLK4-202ENST00000519132 CLUHP3Q96NS8 147 aa9.14□□□□□ -0.95
CLK4-202ENST00000519132 CEP89Q96ST8 783 aa9.14□□□□□ -0.95
CLK4-202ENST00000519132 MAGEC2Q9UBF1 373 aaPredicted RBP9.14□□□□□ -0.95
CLK4-202ENST00000519132 RIMS1Q86UR5 1692 aaKnown RBP9.14□□□□□ -0.95
CLK4-202ENST00000519132 MLECQ14165 292 aa9.14□□□□□ -0.95
CLK4-202ENST00000519132 TCEA2Q15560 299 aa9.14□□□□□ -0.95
CLK4-202ENST00000519132 NIM1KQ8IY84 436 aa9.14□□□□□ -0.95
CLK4-202ENST00000519132 THAP3Q8WTV1 239 aaPredicted RBP9.14□□□□□ -0.95
CLK4-202ENST00000519132 LMNB2Q03252 620 aa9.14□□□□□ -0.95
CLK4-202ENST00000519132 KIAA0319Q5VV43 1072 aa9.14□□□□□ -0.95
CLK4-202ENST00000519132 SEC31BQ9NQW1 1179 aa9.14□□□□□ -0.95
CLK4-202ENST00000519132 FAM13BQ9NYF5 915 aa9.14□□□□□ -0.95
CLK4-202ENST00000519132 RALGAPBQ86X10 1494 aa9.13□□□□□ -0.95
CLK4-202ENST00000519132 PRAG1Q86YV5 1406 aa9.13□□□□□ -0.95
CLK4-202ENST00000519132 CCDC189A1A4V9 331 aa9.13□□□□□ -0.95
CLK4-202ENST00000519132 FAM193AP78312 1265 aa9.13□□□□□ -0.95
CLK4-202ENST00000519132 RNF180Q86T96 592 aa9.13□□□□□ -0.95
CLK4-202ENST00000519132 OSMRQ99650 979 aa9.13□□□□□ -0.95
CLK4-202ENST00000519132 NRXN1Q9ULB1 1477 aa9.13□□□□□ -0.95
CLK4-202ENST00000519132 TM4SF20Q53R12 229 aa9.13□□□□□ -0.95
CLK4-202ENST00000519132 REC114Q7Z4M0 266 aa9.13□□□□□ -0.95
CLK4-202ENST00000519132 ASAP3Q8TDY4 903 aa9.13□□□□□ -0.95
CLK4-202ENST00000519132 NECAB3Q96P71 396 aaPredicted RBP9.13□□□□□ -0.95
CLK4-202ENST00000519132 CRBNQ96SW2 442 aa9.13□□□□□ -0.95
CLK4-202ENST00000519132 TRIM8Q9BZR9 551 aa9.13□□□□□ -0.95
CLK4-202ENST00000519132 POTECB2RU33 542 aa9.12□□□□□ -0.95
CLK4-202ENST00000519132 RPLP1P05386 114 aaKnown RBP9.12□□□□□ -0.95
CLK4-202ENST00000519132 NBPF1Q3BBV0 1214 aa9.12□□□□□ -0.95
CLK4-202ENST00000519132 TNNI3KQ59H18 835 aa9.12□□□□□ -0.95
CLK4-202ENST00000519132 C10orf62Q5T681 223 aaPredicted RBP9.12□□□□□ -0.95
CLK4-202ENST00000519132 C11orf96Q7Z7L8 435 aa9.12□□□□□ -0.95
CLK4-202ENST00000519132 ZIC5Q96T25 663 aa9.12□□□□□ -0.95
CLK4-202ENST00000519132 GRIP2Q9C0E4 1043 aa9.12□□□□□ -0.95
CLK4-202ENST00000519132 TCEAL9Q9UHQ7 104 aa9.12□□□□□ -0.95
CLK4-202ENST00000519132 NEXMIFQ5QGS0 1516 aa9.12□□□□□ -0.95
CLK4-202ENST00000519132 RPGRIP1LQ68CZ1 1315 aa9.12□□□□□ -0.95
CLK4-202ENST00000519132 UBR1Q8IWV7 1749 aa9.12□□□□□ -0.95
CLK4-202ENST00000519132 ADCY3O60266 1144 aa9.12□□□□□ -0.95
CLK4-202ENST00000519132 MTMR1Q13613 665 aa9.12□□□□□ -0.95
CLK4-202ENST00000519132 PPP2R5AQ15172 486 aa9.12□□□□□ -0.95
CLK4-202ENST00000519132 CT47A1Q5JQC4 288 aaPredicted RBP9.12□□□□□ -0.95
CLK4-202ENST00000519132 C8orf48Q96LL4 319 aa9.12□□□□□ -0.95
CLK4-202ENST00000519132 YTHDC1Q96MU7 727 aaKnown RBP9.12□□□□□ -0.95
CLK4-202ENST00000519132 TARS2Q9BW92 718 aaKnown RBP9.12□□□□□ -0.95
CLK4-202ENST00000519132 ASPSCR1Q9BZE9 553 aa9.12□□□□□ -0.95
CLK4-202ENST00000519132 NLRP1Q9C000 1473 aa9.12□□□□□ -0.95
CLK4-202ENST00000519132 LRP10Q7Z4F1 713 aa9.11□□□□□ -0.95
CLK4-202ENST00000519132 TTC6Q86TZ1 520 aa9.11□□□□□ -0.95
CLK4-202ENST00000519132 GPN3Q9UHW5 284 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms