RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 SPATA5Q8NB90 893 aa16.87■□□□□ 0.29
VDAC3-204ENST00000519072 SMCR8Q8TEV9 937 aaPredicted RBP16.87■□□□□ 0.29
VDAC3-204ENST00000519072 OSBPL5Q9H0X9 879 aaPredicted RBP16.87■□□□□ 0.29
VDAC3-204ENST00000519072 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.87■□□□□ 0.29
VDAC3-204ENST00000519072 AGTPBP1Q9UPW5 1226 aa16.87■□□□□ 0.29
VDAC3-204ENST00000519072 TNPO2O14787 897 aaKnown RBP16.86■□□□□ 0.29
VDAC3-204ENST00000519072 IRF5Q13568 498 aa16.86■□□□□ 0.29
VDAC3-204ENST00000519072 GORABQ5T7V8 394 aa16.86■□□□□ 0.29
VDAC3-204ENST00000519072 PI16Q6UXB8 463 aa16.86■□□□□ 0.29
VDAC3-204ENST00000519072 CCDC84Q86UT8 332 aaPredicted RBP16.86■□□□□ 0.29
VDAC3-204ENST00000519072 PXYLP1Q8TE99 480 aa16.86■□□□□ 0.29
VDAC3-204ENST00000519072 U2AF1L4Q8WU68 220 aaKnown RBP16.86■□□□□ 0.29
VDAC3-204ENST00000519072 DPF3Q92784 378 aa16.86■□□□□ 0.29
VDAC3-204ENST00000519072 HTATIP2Q9BUP3 242 aa16.86■□□□□ 0.29
VDAC3-204ENST00000519072 UNC93B1Q9H1C4 597 aa16.86■□□□□ 0.29
VDAC3-204ENST00000519072 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.86■□□□□ 0.29
VDAC3-204ENST00000519072 MAST2Q6P0Q8 1798 aa16.86■□□□□ 0.29
VDAC3-204ENST00000519072 CDK5RAP2Q96SN8 1893 aa16.86■□□□□ 0.29
VDAC3-204ENST00000519072 SIPA1L1O43166 1804 aa16.85■□□□□ 0.29
VDAC3-204ENST00000519072 FAM196BA6NMK8 535 aa16.85■□□□□ 0.29
VDAC3-204ENST00000519072 IPO8O15397 1037 aaKnown RBP16.85■□□□□ 0.29
VDAC3-204ENST00000519072 GNAI2P04899 355 aa16.85■□□□□ 0.29
VDAC3-204ENST00000519072 TRIM27P14373 513 aa16.85■□□□□ 0.29
VDAC3-204ENST00000519072 CAPN2P17655 700 aa16.85■□□□□ 0.29
VDAC3-204ENST00000519072 TBC1D9Q6ZT07 1266 aa16.85■□□□□ 0.29
VDAC3-204ENST00000519072 PROCA1Q8NCQ7 364 aaPredicted RBP16.85■□□□□ 0.29
VDAC3-204ENST00000519072 TBC1D2Q9BYX2 928 aa16.85■□□□□ 0.29
VDAC3-204ENST00000519072 RAI14Q9P0K7 980 aa16.85■□□□□ 0.29
VDAC3-204ENST00000519072 PNMA3Q9UL41 463 aa16.85■□□□□ 0.29
VDAC3-204ENST00000519072 FOCADQ5VW36 1801 aa16.84■□□□□ 0.29
VDAC3-204ENST00000519072 CCER2I3L3R5 266 aa16.84■□□□□ 0.29
VDAC3-204ENST00000519072 FARP2O94887 1054 aaPredicted RBP16.84■□□□□ 0.29
VDAC3-204ENST00000519072 SGPL1O95470 568 aa16.84■□□□□ 0.29
VDAC3-204ENST00000519072 INHAP05111 366 aa16.84■□□□□ 0.29
VDAC3-204ENST00000519072 ELNP15502 786 aa16.84■□□□□ 0.29
VDAC3-204ENST00000519072 MCAMP43121 646 aa16.84■□□□□ 0.29
VDAC3-204ENST00000519072 G3BP1Q13283 466 aaKnown RBP eCLIP16.84■□□□□ 0.29
VDAC3-204ENST00000519072 FAM110CQ1W6H9 321 aa16.84■□□□□ 0.29
VDAC3-204ENST00000519072 TREML2Q5T2D2 321 aa16.84■□□□□ 0.29
VDAC3-204ENST00000519072 CHRDL2Q6WN34 429 aa16.84■□□□□ 0.29
VDAC3-204ENST00000519072 PNMA6EA0A0J9YXQ4 647 aa16.83■□□□□ 0.28
VDAC3-204ENST00000519072 UQCRFS1P1P0C7P4 283 aa16.83■□□□□ 0.28
VDAC3-204ENST00000519072 CAP2P40123 477 aa16.83■□□□□ 0.28
VDAC3-204ENST00000519072 SPP2Q13103 211 aa16.83■□□□□ 0.28
VDAC3-204ENST00000519072 ATF7IPQ6VMQ6 1270 aa16.83■□□□□ 0.28
VDAC3-204ENST00000519072 TEX11Q8IYF3 940 aa16.83■□□□□ 0.28
VDAC3-204ENST00000519072 ANKRD13CQ8N6S4 541 aa16.83■□□□□ 0.28
VDAC3-204ENST00000519072 ZNF280CQ8ND82 737 aa16.83■□□□□ 0.28
VDAC3-204ENST00000519072 COA7Q96BR5 231 aa16.83■□□□□ 0.28
VDAC3-204ENST00000519072 MYO5AQ9Y4I1 1855 aaKnown RBP16.83■□□□□ 0.28
VDAC3-204ENST00000519072 GCLCP48506 637 aaPredicted RBP16.82■□□□□ 0.28
VDAC3-204ENST00000519072 PABPC4Q13310 644 aaKnown RBP eCLIP16.82■□□□□ 0.28
VDAC3-204ENST00000519072 LRP2BPQ9P2M1 347 aa16.82■□□□□ 0.28
VDAC3-204ENST00000519072 HERC5Q9UII4 1024 aaKnown RBP16.82■□□□□ 0.28
VDAC3-204ENST00000519072 TNNQ9UQP3 1299 aa16.82■□□□□ 0.28
VDAC3-204ENST00000519072 RRP1BQ14684 758 aaKnown RBP16.81■□□□□ 0.28
VDAC3-204ENST00000519072 SH3D19Q5HYK7 790 aa16.81■□□□□ 0.28
VDAC3-204ENST00000519072 GPR108Q9NPR9 543 aa16.81■□□□□ 0.28
VDAC3-204ENST00000519072 PAK6Q9NQU5 681 aaPredicted RBP16.81■□□□□ 0.28
VDAC3-204ENST00000519072 RBM27Q9P2N5 1060 aaKnown RBP16.81■□□□□ 0.28
VDAC3-204ENST00000519072 NR2E3Q9Y5X4 410 aa16.81■□□□□ 0.28
VDAC3-204ENST00000519072 ALPK3Q96L96 1907 aa16.8■□□□□ 0.28
VDAC3-204ENST00000519072 USP17L5A8MUK1 530 aa16.8■□□□□ 0.28
VDAC3-204ENST00000519072 BCAR3O75815 825 aa16.8■□□□□ 0.28
VDAC3-204ENST00000519072 HMGCS2P54868 508 aa16.8■□□□□ 0.28
VDAC3-204ENST00000519072 SH3RF3Q8TEJ3 882 aaPredicted RBP16.8■□□□□ 0.28
VDAC3-204ENST00000519072 FRAT1Q92837 279 aaPredicted RBP16.8■□□□□ 0.28
VDAC3-204ENST00000519072 DEFB118Q96PH6 123 aa16.8■□□□□ 0.28
VDAC3-204ENST00000519072 NOL10Q9BSC4 688 aaKnown RBP16.8■□□□□ 0.28
VDAC3-204ENST00000519072 DHX36Q9H2U1 1008 aaKnown RBP16.8■□□□□ 0.28
VDAC3-204ENST00000519072 PRO3102Q9H379 93 aa16.8■□□□□ 0.28
VDAC3-204ENST00000519072 AS3MTQ9HBK9 375 aa16.8■□□□□ 0.28
VDAC3-204ENST00000519072 PI4KBQ9UBF8 816 aa16.8■□□□□ 0.28
VDAC3-204ENST00000519072 PLXNB2O15031 1838 aa16.8■□□□□ 0.28
VDAC3-204ENST00000519072 ZBTB7BO15156 539 aaPredicted RBP16.79■□□□□ 0.28
VDAC3-204ENST00000519072 BAG3O95817 575 aa16.79■□□□□ 0.28
VDAC3-204ENST00000519072 PPP4CP60510 307 aa16.79■□□□□ 0.28
VDAC3-204ENST00000519072 NAA16Q6N069 864 aaPredicted RBP16.79■□□□□ 0.28
VDAC3-204ENST00000519072 CLUAP1Q96AJ1 413 aa16.79■□□□□ 0.28
VDAC3-204ENST00000519072 CRISPLD2Q9H0B8 497 aa16.79■□□□□ 0.28
VDAC3-204ENST00000519072 ASCC2Q9H1I8 757 aaPredicted RBP16.79■□□□□ 0.28
VDAC3-204ENST00000519072 AATFQ9NY61 560 aaKnown RBP eCLIP16.79■□□□□ 0.28
VDAC3-204ENST00000519072 TAOK2Q9UL54 1235 aa16.79■□□□□ 0.28
VDAC3-204ENST00000519072 IGSF3O75054 1194 aa16.78■□□□□ 0.28
VDAC3-204ENST00000519072 TFRCP02786 760 aaKnown RBP16.78■□□□□ 0.28
VDAC3-204ENST00000519072 PLCG2P16885 1265 aa16.78■□□□□ 0.28
VDAC3-204ENST00000519072 TNNI3KQ59H18 835 aa16.78■□□□□ 0.28
VDAC3-204ENST00000519072 TTC39AQ5SRH9 613 aa16.78■□□□□ 0.28
VDAC3-204ENST00000519072 WDR18Q9BV38 432 aa16.78■□□□□ 0.28
VDAC3-204ENST00000519072 SNRKQ9NRH2 765 aa16.78■□□□□ 0.28
VDAC3-204ENST00000519072 FPGT-TNNI3KV9GXZ4 949 aa16.78■□□□□ 0.28
VDAC3-204ENST00000519072 HMGCRP04035 888 aa16.77■□□□□ 0.28
VDAC3-204ENST00000519072 ASNSP08243 561 aa16.77■□□□□ 0.28
VDAC3-204ENST00000519072 CCDC158Q5M9N0 1113 aa16.77■□□□□ 0.28
VDAC3-204ENST00000519072 METTL16Q86W50 562 aaKnown RBP16.77■□□□□ 0.28
VDAC3-204ENST00000519072 TMEM57Q8N5G2 664 aa16.77■□□□□ 0.28
VDAC3-204ENST00000519072 SSH3Q8TE77 659 aa16.77■□□□□ 0.28
VDAC3-204ENST00000519072 ZNF512BQ96KM6 892 aaPredicted RBP16.77■□□□□ 0.28
VDAC3-204ENST00000519072 DBNDD2Q9BQY9 259 aa16.77■□□□□ 0.28
VDAC3-204ENST00000519072 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms