RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 SDSP20132 328 aa9.23□□□□□ -0.93
CSGALNACT1-206ENST00000518542 TCP10Q12799 353 aa9.23□□□□□ -0.93
CSGALNACT1-206ENST00000518542 PICALMQ13492 652 aa9.23□□□□□ -0.93
CSGALNACT1-206ENST00000518542 SUPT20HL1Q3ZLR7 823 aa9.23□□□□□ -0.93
CSGALNACT1-206ENST00000518542 BMP2KLQ5H9B9 411 aa9.23□□□□□ -0.93
CSGALNACT1-206ENST00000518542 ZMYM1Q5SVZ6 1142 aa9.23□□□□□ -0.93
CSGALNACT1-206ENST00000518542 ZSCAN29Q8IWY8 852 aaPredicted RBP9.23□□□□□ -0.93
CSGALNACT1-206ENST00000518542 TGFBRAP1Q8WUH2 860 aa9.23□□□□□ -0.93
CSGALNACT1-206ENST00000518542 FAM151AQ8WW52 585 aa9.23□□□□□ -0.93
CSGALNACT1-206ENST00000518542 DDRGK1Q96HY6 314 aa9.23□□□□□ -0.93
CSGALNACT1-206ENST00000518542 RIOK1Q9BRS2 568 aaKnown RBP9.23□□□□□ -0.93
CSGALNACT1-206ENST00000518542 PUS7LQ9H0K6 701 aaKnown RBP9.23□□□□□ -0.93
CSGALNACT1-206ENST00000518542 HELLSQ9NRZ9 838 aa9.23□□□□□ -0.93
CSGALNACT1-206ENST00000518542 FAM198AQ9UFP1 575 aa9.23□□□□□ -0.93
CSGALNACT1-206ENST00000518542 SCAF8Q9UPN6 1271 aaKnown RBP9.23□□□□□ -0.93
CSGALNACT1-206ENST00000518542 THSD7BQ9C0I4 1608 aa9.23□□□□□ -0.93
CSGALNACT1-206ENST00000518542 WDHD1O75717 1129 aaPredicted RBP9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 CELF2O95319 508 aaKnown RBP9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 GNAT2P19087 354 aa9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 VEGFBP49765 207 aa9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 MFAP1P55081 439 aaKnown RBP9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 NFIAQ12857 509 aa9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 SLFNL1Q499Z3 407 aa9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 MCMDC2Q4G0Z9 681 aa9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 SKAP1Q86WV1 359 aa9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 LCORLQ8N3X6 602 aa9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 RUFY2Q8WXA3 655 aa9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 OSBP2Q969R2 916 aa9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 CDCA5Q96FF9 252 aa9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 TMEM39BQ9GZU3 492 aa9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 ARMT1Q9H993 441 aa9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 ZNF408Q9H9D4 720 aa9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 DDX4Q9NQI0 724 aaKnown RBP9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 ATP8A2Q9NTI2 1148 aa9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 WBP1LQ9NX94 342 aa9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 RPAP1Q9BWH6 1393 aaPredicted RBP9.22□□□□□ -0.93
CSGALNACT1-206ENST00000518542 M0R2C6 588 aa9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 GPAA1O43292 621 aa9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 PPP1R12BO60237 982 aaPredicted RBP9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 CHGBP05060 677 aa9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 CTCFP49711 727 aaPredicted RBP9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 LBX1P52954 281 aa9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 NMIQ13287 307 aaPredicted RBP9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 TTLL12Q14166 644 aaPredicted RBP9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 PRAMEF18Q5VWM3 479 aa9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 CWC27Q6UX04 472 aaKnown RBP9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 MAPKAPK5Q8IW41 473 aa9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 AMOTL1Q8IY63 956 aa9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 C2orf69Q8N8R5 385 aa9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 STRBPQ96SI9 672 aaKnown RBP9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 OSBPL5Q9H0X9 879 aaPredicted RBP9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 DHX36Q9H2U1 1008 aaKnown RBP9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 SLC4A4Q9Y6R1 1079 aa9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 FLT1P17948 1338 aa9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 NAV1Q8NEY1 1877 aa9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 BAZ2AQ9UIF9 1905 aaKnown RBP9.21□□□□□ -0.94
CSGALNACT1-206ENST00000518542 A0A0D9SFI3 127 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 TMEM88BA6NKF7 163 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 APPP05067 770 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 POLR3DP05423 398 aaPredicted RBP9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 HLA-DOAP06340 250 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 HSPA8P11142 646 aaKnown RBP9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 FKBP1BP68106 108 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 FMR1Q06787 632 aaKnown RBP eCLIP9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 NBPF12Q5TAG4 269 aaPredicted RBP9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 DCAF15Q66K64 600 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 CASC1Q6TDU7 716 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 DLK2Q6UY11 383 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 ARMC9Q7Z3E5 817 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 TTC6Q86TZ1 520 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 ZFPM1Q8IX07 1006 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 SDR42E1Q8WUS8 393 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 FAM227BQ96M60 508 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 TEPSINQ96N21 525 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 CSRNP1Q96S65 589 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 SEC62Q99442 399 aaKnown RBP9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 TMEM121BQ9BXQ6 578 aaPredicted RBP9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 TRIM34Q9BYJ4 488 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 NACAP1Q9BZK3 213 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 GBA2Q9HCG7 927 aaPredicted RBP9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 PI4KBQ9UBF8 816 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 ATRNL1Q5VV63 1379 aa9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 COL2A1P02458 1487 aaPredicted RBP9.2□□□□□ -0.94
CSGALNACT1-206ENST00000518542 DDTLA6NHG4 134 aaPredicted RBP9.19□□□□□ -0.94
CSGALNACT1-206ENST00000518542 PATL2C9JE40 543 aaKnown RBP9.19□□□□□ -0.94
CSGALNACT1-206ENST00000518542 PRKAB2O43741 272 aa9.19□□□□□ -0.94
CSGALNACT1-206ENST00000518542 CHMLP26374 656 aa9.19□□□□□ -0.94
CSGALNACT1-206ENST00000518542 IREB2P48200 963 aaKnown RBP9.19□□□□□ -0.94
CSGALNACT1-206ENST00000518542 CST9Q5W186 159 aa9.19□□□□□ -0.94
CSGALNACT1-206ENST00000518542 GIMAP6Q6P9H5 292 aa9.19□□□□□ -0.94
CSGALNACT1-206ENST00000518542 ABHD8Q96I13 439 aa9.19□□□□□ -0.94
CSGALNACT1-206ENST00000518542 DCP1AQ9NPI6 582 aaPredicted RBP9.19□□□□□ -0.94
CSGALNACT1-206ENST00000518542 MCM9Q9NXL9 1143 aa9.19□□□□□ -0.94
CSGALNACT1-206ENST00000518542 SAP30BPQ9UHR5 308 aaKnown RBP9.19□□□□□ -0.94
CSGALNACT1-206ENST00000518542 PALD1Q9ULE6 856 aa9.19□□□□□ -0.94
CSGALNACT1-206ENST00000518542 CCDC171Q6TFL3 1326 aa9.19□□□□□ -0.94
CSGALNACT1-206ENST00000518542 RAD50Q92878 1312 aa9.19□□□□□ -0.94
CSGALNACT1-206ENST00000518542 PAPPA2Q9BXP8 1791 aa9.19□□□□□ -0.94
CSGALNACT1-206ENST00000518542 RASSF10A6NK89 507 aa9.18□□□□□ -0.94
CSGALNACT1-206ENST00000518542 GSG1L2A8MUP6 293 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms