RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 MICALL2Q8IY33 904 aa12.51□□□□□ -0.41
PABPC1-203ENST00000517921 GPC2Q8N158 579 aa12.51□□□□□ -0.41
PABPC1-203ENST00000517921 LRRC2Q9BYS8 371 aa12.51□□□□□ -0.41
PABPC1-203ENST00000517921 TDRD3Q9H7E2 651 aaKnown RBP12.51□□□□□ -0.41
PABPC1-203ENST00000517921 CNNM2Q9H8M5 875 aa12.51□□□□□ -0.41
PABPC1-203ENST00000517921 FAM198AQ9UFP1 575 aa12.51□□□□□ -0.41
PABPC1-203ENST00000517921 WDR19Q8NEZ3 1342 aa12.51□□□□□ -0.41
PABPC1-203ENST00000517921 WDR90Q96KV7 1748 aa12.51□□□□□ -0.41
PABPC1-203ENST00000517921 ORC4O43929 436 aa12.5□□□□□ -0.41
PABPC1-203ENST00000517921 POLR3DP05423 398 aaPredicted RBP12.5□□□□□ -0.41
PABPC1-203ENST00000517921 MCM5P33992 734 aa12.5□□□□□ -0.41
PABPC1-203ENST00000517921 PLCD1P51178 756 aa12.5□□□□□ -0.41
PABPC1-203ENST00000517921 APLP1P51693 650 aa12.5□□□□□ -0.41
PABPC1-203ENST00000517921 CACNB3P54284 484 aa12.5□□□□□ -0.41
PABPC1-203ENST00000517921 SPDYE2Q495Y8 402 aa12.5□□□□□ -0.41
PABPC1-203ENST00000517921 Q6ZUG5 572 aa12.5□□□□□ -0.41
PABPC1-203ENST00000517921 NOL8Q76FK4 1167 aaKnown RBP12.5□□□□□ -0.41
PABPC1-203ENST00000517921 AMOTL1Q8IY63 956 aa12.5□□□□□ -0.41
PABPC1-203ENST00000517921 STK11IPQ8N1F8 1099 aa12.5□□□□□ -0.41
PABPC1-203ENST00000517921 AGXT2Q9BYV1 514 aa12.5□□□□□ -0.41
PABPC1-203ENST00000517921 KRT23Q9C075 422 aa12.5□□□□□ -0.41
PABPC1-203ENST00000517921 MYOZ2Q9NPC6 264 aa12.5□□□□□ -0.41
PABPC1-203ENST00000517921 ZNF70Q9UC06 446 aaPredicted RBP12.5□□□□□ -0.41
PABPC1-203ENST00000517921 ATRNL1Q5VV63 1379 aa12.5□□□□□ -0.41
PABPC1-203ENST00000517921 CLRN2A0PK11 232 aa12.49□□□□□ -0.41
PABPC1-203ENST00000517921 WNT10BO00744 389 aa12.49□□□□□ -0.41
PABPC1-203ENST00000517921 PRC1O43663 620 aa12.49□□□□□ -0.41
PABPC1-203ENST00000517921 EGFRP00533 1210 aa12.49□□□□□ -0.41
PABPC1-203ENST00000517921 SLC3A2P08195 630 aaKnown RBP12.49□□□□□ -0.41
PABPC1-203ENST00000517921 FSTL1Q12841 308 aa12.49□□□□□ -0.41
PABPC1-203ENST00000517921 RRP12Q5JTH9 1297 aaKnown RBP12.49□□□□□ -0.41
PABPC1-203ENST00000517921 CHST3Q7LGC8 479 aa12.49□□□□□ -0.41
PABPC1-203ENST00000517921 ZFPM1Q8IX07 1006 aa12.49□□□□□ -0.41
PABPC1-203ENST00000517921 FBXL16Q8N461 479 aa12.49□□□□□ -0.41
PABPC1-203ENST00000517921 SMC1BQ8NDV3 1235 aa12.49□□□□□ -0.41
PABPC1-203ENST00000517921 DYNLL2Q96FJ2 89 aa12.49□□□□□ -0.41
PABPC1-203ENST00000517921 TMX3Q96JJ7 454 aa12.49□□□□□ -0.41
PABPC1-203ENST00000517921 TOMM22Q9NS69 142 aa12.49□□□□□ -0.41
PABPC1-203ENST00000517921 TMOD2Q9NZR1 351 aa12.49□□□□□ -0.41
PABPC1-203ENST00000517921 CNOT7Q9UIV1 285 aaKnown RBP12.49□□□□□ -0.41
PABPC1-203ENST00000517921 CNTNAP1P78357 1384 aa12.48□□□□□ -0.41
PABPC1-203ENST00000517921 KDM4AO75164 1064 aa12.48□□□□□ -0.41
PABPC1-203ENST00000517921 ENTPD3O75355 529 aa12.48□□□□□ -0.41
PABPC1-203ENST00000517921 PRDM1O75626 825 aa12.48□□□□□ -0.41
PABPC1-203ENST00000517921 DDNO94850 711 aaPredicted RBP12.48□□□□□ -0.41
PABPC1-203ENST00000517921 LARGE1O95461 756 aa12.48□□□□□ -0.41
PABPC1-203ENST00000517921 GABPAQ06546 454 aa12.48□□□□□ -0.41
PABPC1-203ENST00000517921 TCP10Q12799 353 aa12.48□□□□□ -0.41
PABPC1-203ENST00000517921 ANKRD1Q15327 319 aa12.48□□□□□ -0.41
PABPC1-203ENST00000517921 KIF4BQ2VIQ3 1234 aa12.48□□□□□ -0.41
PABPC1-203ENST00000517921 NBPF9Q3BBW0 867 aa12.48□□□□□ -0.41
PABPC1-203ENST00000517921 PPP4R3CPQ6ZMV5 832 aa12.48□□□□□ -0.41
PABPC1-203ENST00000517921 C16orf86Q6ZW13 317 aa12.48□□□□□ -0.41
PABPC1-203ENST00000517921 SAMD7Q7Z3H4 446 aa12.48□□□□□ -0.41
PABPC1-203ENST00000517921 SLC44A5Q8NCS7 719 aa12.48□□□□□ -0.41
PABPC1-203ENST00000517921 LARP6Q9BRS8 491 aaKnown RBP12.48□□□□□ -0.41
PABPC1-203ENST00000517921 GPHNQ9NQX3 736 aaPredicted RBP12.48□□□□□ -0.41
PABPC1-203ENST00000517921 GPRC5DQ9NZD1 345 aa12.48□□□□□ -0.41
PABPC1-203ENST00000517921 LIMCH1Q9UPQ0 1083 aa12.48□□□□□ -0.41
PABPC1-203ENST00000517921 DOCK1Q14185 1865 aa12.47□□□□□ -0.41
PABPC1-203ENST00000517921 DDTLA6NHG4 134 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-203ENST00000517921 SH2B2O14492 632 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-203ENST00000517921 PDE4BQ07343 736 aa12.47□□□□□ -0.41
PABPC1-203ENST00000517921 CUL4AQ13619 759 aa12.47□□□□□ -0.41
PABPC1-203ENST00000517921 FKBP1CQ5VVH2 108 aa12.47□□□□□ -0.41
PABPC1-203ENST00000517921 SH3BP5LQ7L8J4 393 aa12.47□□□□□ -0.41
PABPC1-203ENST00000517921 TTC6Q86TZ1 520 aa12.47□□□□□ -0.41
PABPC1-203ENST00000517921 ESR2Q92731 530 aa12.47□□□□□ -0.41
PABPC1-203ENST00000517921 BRF1Q92994 677 aa12.47□□□□□ -0.41
PABPC1-203ENST00000517921 ZSWIM5Q9P217 1185 aa12.47□□□□□ -0.41
PABPC1-203ENST00000517921 DAXXQ9UER7 740 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-203ENST00000517921 TPCN1Q9ULQ1 816 aa12.47□□□□□ -0.41
PABPC1-203ENST00000517921 BAZ2BQ9UIF8 2168 aaKnown RBP12.47□□□□□ -0.41
PABPC1-203ENST00000517921 TCP10L2B9ZVM9 353 aa12.46□□□□□ -0.41
PABPC1-203ENST00000517921 MYO1BO43795 1136 aa12.46□□□□□ -0.41
PABPC1-203ENST00000517921 RANBP6O60518 1105 aaKnown RBP12.46□□□□□ -0.41
PABPC1-203ENST00000517921 HLA-DOAP06340 250 aa12.46□□□□□ -0.41
PABPC1-203ENST00000517921 RASA1P20936 1047 aa12.46□□□□□ -0.41
PABPC1-203ENST00000517921 CDK8P49336 464 aa12.46□□□□□ -0.41
PABPC1-203ENST00000517921 NT5C2P49902 561 aa12.46□□□□□ -0.41
PABPC1-203ENST00000517921 FGD1P98174 961 aa12.46□□□□□ -0.41
PABPC1-203ENST00000517921 ST3GAL1Q11201 340 aa12.46□□□□□ -0.41
PABPC1-203ENST00000517921 ME3Q16798 604 aa12.46□□□□□ -0.41
PABPC1-203ENST00000517921 TBC1D10BQ4KMP7 808 aaPredicted RBP12.46□□□□□ -0.41
PABPC1-203ENST00000517921 TRPM4Q8TD43 1214 aa12.46□□□□□ -0.41
PABPC1-203ENST00000517921 IGDCC4Q8TDY8 1250 aa12.46□□□□□ -0.41
PABPC1-203ENST00000517921 TMEM87BQ96K49 555 aa12.46□□□□□ -0.41
PABPC1-203ENST00000517921 ZSCAN31Q96LW9 406 aaPredicted RBP12.46□□□□□ -0.41
PABPC1-203ENST00000517921 MTA3Q9BTC8 594 aa12.46□□□□□ -0.41
PABPC1-203ENST00000517921 EHD4Q9H223 541 aa12.46□□□□□ -0.41
PABPC1-203ENST00000517921 DHX36Q9H2U1 1008 aaKnown RBP12.46□□□□□ -0.41
PABPC1-203ENST00000517921 VEZTQ9HBM0 779 aa12.46□□□□□ -0.41
PABPC1-203ENST00000517921 SERPINB13Q9UIV8 391 aa12.46□□□□□ -0.41
PABPC1-203ENST00000517921 ANGEL1Q9UNK9 670 aaKnown RBP12.46□□□□□ -0.41
PABPC1-203ENST00000517921 OTOFQ9HC10 1997 aa12.46□□□□□ -0.41
PABPC1-203ENST00000517921 MYH15Q9Y2K3 1946 aa12.46□□□□□ -0.42
PABPC1-203ENST00000517921 PAPPA2Q9BXP8 1791 aa12.46□□□□□ -0.42
PABPC1-203ENST00000517921 PLIN4Q96Q06 1357 aa12.45□□□□□ -0.42
PABPC1-203ENST00000517921 IQCA1LA6NCM1 817 aa12.45□□□□□ -0.42
PABPC1-203ENST00000517921 H7C1D1 291 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms