RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.38□□□□□ -1.87
RNU2-56P-201ENST00000516826 GALNT12Q8IXK2 581 aa3.38□□□□□ -1.87
RNU2-56P-201ENST00000516826 RNF214Q8ND24 703 aa3.38□□□□□ -1.87
RNU2-56P-201ENST00000516826 KCNK12Q9HB15 430 aa3.38□□□□□ -1.87
RNU2-56P-201ENST00000516826 SEMA3GQ9NS98 782 aa3.38□□□□□ -1.87
RNU2-56P-201ENST00000516826 FOXD3Q9UJU5 478 aaPredicted RBP3.38□□□□□ -1.87
RNU2-56P-201ENST00000516826 SEMA7AO75326 666 aa3.37□□□□□ -1.87
RNU2-56P-201ENST00000516826 NEFMP07197 916 aa3.37□□□□□ -1.87
RNU2-56P-201ENST00000516826 HCLS1P14317 486 aaPredicted RBP3.37□□□□□ -1.87
RNU2-56P-201ENST00000516826 ERVK-24P63145 666 aa3.37□□□□□ -1.87
RNU2-56P-201ENST00000516826 CDCA8Q53HL2 280 aa3.37□□□□□ -1.87
RNU2-56P-201ENST00000516826 C22orf34Q6ZV56 151 aa3.37□□□□□ -1.87
RNU2-56P-201ENST00000516826 ISL2Q96A47 359 aa3.37□□□□□ -1.87
RNU2-56P-201ENST00000516826 XYLT2Q9H1B5 865 aa3.37□□□□□ -1.87
RNU2-56P-201ENST00000516826 PRDM10Q9NQV6 1147 aa3.37□□□□□ -1.87
RNU2-56P-201ENST00000516826 POLIQ9UNA4 740 aa3.37□□□□□ -1.87
RNU2-56P-201ENST00000516826 MAPK8IP1Q9UQF2 711 aa3.37□□□□□ -1.87
RNU2-56P-201ENST00000516826 PEX10O60683 326 aa3.36□□□□□ -1.87
RNU2-56P-201ENST00000516826 NPR3P17342 541 aa3.36□□□□□ -1.87
RNU2-56P-201ENST00000516826 DLG4P78352 724 aa3.36□□□□□ -1.87
RNU2-56P-201ENST00000516826 ZNF385BQ569K4 471 aa3.36□□□□□ -1.87
RNU2-56P-201ENST00000516826 STK32AQ8WU08 396 aa3.36□□□□□ -1.87
RNU2-56P-201ENST00000516826 ALPK1Q96QP1 1244 aa3.36□□□□□ -1.87
RNU2-56P-201ENST00000516826 FOXQ1Q9C009 403 aa3.36□□□□□ -1.87
RNU2-56P-201ENST00000516826 SSU72Q9NP77 194 aaKnown RBP3.36□□□□□ -1.87
RNU2-56P-201ENST00000516826 SEPT3Q9UH03 358 aa3.36□□□□□ -1.87
RNU2-56P-201ENST00000516826 TMEM88BA6NKF7 163 aa3.35□□□□□ -1.87
RNU2-56P-201ENST00000516826 TRIM13O60858 407 aa3.35□□□□□ -1.87
RNU2-56P-201ENST00000516826 SASH1O94885 1247 aa3.35□□□□□ -1.87
RNU2-56P-201ENST00000516826 EOMESO95936 686 aa3.35□□□□□ -1.87
RNU2-56P-201ENST00000516826 GSTP1P09211 210 aaKnown RBP3.35□□□□□ -1.87
RNU2-56P-201ENST00000516826 ZC3H12AQ5D1E8 599 aaKnown RBP3.35□□□□□ -1.87
RNU2-56P-201ENST00000516826 TMEM164Q5U3C3 297 aa3.35□□□□□ -1.87
RNU2-56P-201ENST00000516826 THAP5Q7Z6K1 395 aa3.35□□□□□ -1.87
RNU2-56P-201ENST00000516826 IRF2BP1Q8IU81 584 aa3.35□□□□□ -1.87
RNU2-56P-201ENST00000516826 MYLIPQ8WY64 445 aa3.35□□□□□ -1.87
RNU2-56P-201ENST00000516826 HSPA12BQ96MM6 686 aa3.35□□□□□ -1.87
RNU2-56P-201ENST00000516826 ATP13A1Q9HD20 1204 aa3.35□□□□□ -1.87
RNU2-56P-201ENST00000516826 USTQ9Y2C2 406 aa3.35□□□□□ -1.87
RNU2-56P-201ENST00000516826 SUV39H1O43463 412 aa3.34□□□□□ -1.87
RNU2-56P-201ENST00000516826 HPXP02790 462 aa3.34□□□□□ -1.87
RNU2-56P-201ENST00000516826 EFEMP1Q12805 493 aa3.34□□□□□ -1.87
RNU2-56P-201ENST00000516826 SPATS1Q496A3 300 aa3.34□□□□□ -1.87
RNU2-56P-201ENST00000516826 TTC6Q86TZ1 520 aa3.34□□□□□ -1.87
RNU2-56P-201ENST00000516826 GJD3Q8N144 294 aa3.34□□□□□ -1.87
RNU2-56P-201ENST00000516826 MCOLN1Q9GZU1 580 aa3.34□□□□□ -1.87
RNU2-56P-201ENST00000516826 PRDM5Q9NQX1 630 aaPredicted RBP3.34□□□□□ -1.87
RNU2-56P-201ENST00000516826 SLAIN2Q9P270 581 aa3.34□□□□□ -1.87
RNU2-56P-201ENST00000516826 CNOT6Q9ULM6 557 aaKnown RBP3.34□□□□□ -1.87
RNU2-56P-201ENST00000516826 MYRFQ9Y2G1 1151 aa3.34□□□□□ -1.87
RNU2-56P-201ENST00000516826 TEX51A0A1B0GUA7 166 aa3.33□□□□□ -1.88
RNU2-56P-201ENST00000516826 RFXAPO00287 272 aa3.33□□□□□ -1.88
RNU2-56P-201ENST00000516826 POLR3DP05423 398 aaPredicted RBP3.33□□□□□ -1.88
RNU2-56P-201ENST00000516826 MPSTP25325 297 aa3.33□□□□□ -1.88
RNU2-56P-201ENST00000516826 PDZD3Q86UT5 571 aa3.33□□□□□ -1.88
RNU2-56P-201ENST00000516826 KCTD3Q9Y597 815 aa3.33□□□□□ -1.88
RNU2-56P-201ENST00000516826 OTOL1A6NHN0 477 aaPredicted RBP3.32□□□□□ -1.88
RNU2-56P-201ENST00000516826 FAM155AB1AL88 458 aaPredicted RBP3.32□□□□□ -1.88
RNU2-56P-201ENST00000516826 NEFLP07196 543 aa3.32□□□□□ -1.88
RNU2-56P-201ENST00000516826 PRPF40BQ6NWY9 871 aaKnown RBP3.32□□□□□ -1.88
RNU2-56P-201ENST00000516826 RETREG2Q8NC44 543 aa3.32□□□□□ -1.88
RNU2-56P-201ENST00000516826 ZC3H12CQ9C0D7 883 aaKnown RBP3.32□□□□□ -1.88
RNU2-56P-201ENST00000516826 SLC6A17Q9H1V8 727 aa3.32□□□□□ -1.88
RNU2-56P-201ENST00000516826 ZNF552Q9H707 407 aaPredicted RBP3.32□□□□□ -1.88
RNU2-56P-201ENST00000516826 GCM1Q9NP62 436 aa3.32□□□□□ -1.88
RNU2-56P-201ENST00000516826 ST14Q9Y5Y6 855 aa3.32□□□□□ -1.88
RNU2-56P-201ENST00000516826 MYOCOSA0A1B0GUC4 107 aa3.31□□□□□ -1.88
RNU2-56P-201ENST00000516826 FZD6O60353 706 aa3.31□□□□□ -1.88
RNU2-56P-201ENST00000516826 FAM13AO94988 1023 aa3.31□□□□□ -1.88
RNU2-56P-201ENST00000516826 ATP2B4P23634 1241 aa3.31□□□□□ -1.88
RNU2-56P-201ENST00000516826 RING1Q06587 406 aa3.31□□□□□ -1.88
RNU2-56P-201ENST00000516826 LILRA2Q8N149 483 aa3.31□□□□□ -1.88
RNU2-56P-201ENST00000516826 MFSD4AQ8N468 514 aa3.31□□□□□ -1.88
RNU2-56P-201ENST00000516826 KCT2Q8NC54 265 aa3.31□□□□□ -1.88
RNU2-56P-201ENST00000516826 CRELD1Q96HD1 420 aa3.31□□□□□ -1.88
RNU2-56P-201ENST00000516826 TEPSINQ96N21 525 aa3.31□□□□□ -1.88
RNU2-56P-201ENST00000516826 ARID3AQ99856 593 aa3.31□□□□□ -1.88
RNU2-56P-201ENST00000516826 EHD4Q9H223 541 aa3.31□□□□□ -1.88
RNU2-56P-201ENST00000516826 CACNA2D2Q9NY47 1150 aa3.31□□□□□ -1.88
RNU2-56P-201ENST00000516826 SLAMF8Q9P0V8 285 aa3.31□□□□□ -1.88
RNU2-56P-201ENST00000516826 TMEM59LQ9UK28 342 aa3.31□□□□□ -1.88
RNU2-56P-201ENST00000516826 CNOT11Q9UKZ1 510 aaKnown RBP3.31□□□□□ -1.88
RNU2-56P-201ENST00000516826 DNAJC25-GNG10A0A024R161 153 aa3.3□□□□□ -1.88
RNU2-56P-201ENST00000516826 TMEM238LA0A1B0GVL6 79 aa3.3□□□□□ -1.88
RNU2-56P-201ENST00000516826 FANCGO15287 622 aa3.3□□□□□ -1.88
RNU2-56P-201ENST00000516826 SSFA2P28290 1259 aa3.3□□□□□ -1.88
RNU2-56P-201ENST00000516826 NTF4P34130 210 aa3.3□□□□□ -1.88
RNU2-56P-201ENST00000516826 PPP2R3AQ06190 1150 aa3.3□□□□□ -1.88
RNU2-56P-201ENST00000516826 FAAP100Q0VG06 881 aa3.3□□□□□ -1.88
RNU2-56P-201ENST00000516826 AAMPQ13685 434 aa3.3□□□□□ -1.88
RNU2-56P-201ENST00000516826 SFRP5Q5T4F7 317 aa3.3□□□□□ -1.88
RNU2-56P-201ENST00000516826 PHLDB3Q6NSJ2 640 aa3.3□□□□□ -1.88
RNU2-56P-201ENST00000516826 TMPRSS7Q7RTY8 843 aa3.3□□□□□ -1.88
RNU2-56P-201ENST00000516826 COX4I2Q96KJ9 171 aa3.3□□□□□ -1.88
RNU2-56P-201ENST00000516826 DNAJC25Q9H1X3 360 aa3.3□□□□□ -1.88
RNU2-56P-201ENST00000516826 SP110Q9HB58 689 aa3.3□□□□□ -1.88
RNU2-56P-201ENST00000516826 CWC22Q9HCG8 908 aaKnown RBP3.3□□□□□ -1.88
RNU2-56P-201ENST00000516826 ABCB6Q9NP58 842 aa3.3□□□□□ -1.88
RNU2-56P-201ENST00000516826 TMEM39AQ9NV64 488 aa3.3□□□□□ -1.88
RNU2-56P-201ENST00000516826 CAPN6Q9Y6Q1 641 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms