RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 ARMC5Q96C12 935 aa10.19□□□□□ -0.78
SFXN1-211ENST00000515736 GCC1Q96CN9 775 aa10.19□□□□□ -0.78
SFXN1-211ENST00000515736 DNAJC2Q99543 621 aaKnown RBP10.19□□□□□ -0.78
SFXN1-211ENST00000515736 SYT17Q9BSW7 474 aa10.19□□□□□ -0.78
SFXN1-211ENST00000515736 C12orf49Q9H741 205 aa10.19□□□□□ -0.78
SFXN1-211ENST00000515736 CUEDC1Q9NWM3 386 aaPredicted RBP10.19□□□□□ -0.78
SFXN1-211ENST00000515736 LAS1LQ9Y4W2 734 aaKnown RBP10.19□□□□□ -0.78
SFXN1-211ENST00000515736 DOT1LQ8TEK3 1739 aa10.19□□□□□ -0.78
SFXN1-211ENST00000515736 PXDNLA1KZ92 1463 aa10.18□□□□□ -0.78
SFXN1-211ENST00000515736 MAP3K5Q99683 1374 aa10.18□□□□□ -0.78
SFXN1-211ENST00000515736 GIPC1O14908 333 aa10.18□□□□□ -0.78
SFXN1-211ENST00000515736 TNFRSF21O75509 655 aa10.18□□□□□ -0.78
SFXN1-211ENST00000515736 USPL1Q5W0Q7 1092 aa10.18□□□□□ -0.78
SFXN1-211ENST00000515736 DDX54Q8TDD1 881 aaKnown RBP10.18□□□□□ -0.78
SFXN1-211ENST00000515736 CCDC74AQ96AQ1 378 aa10.18□□□□□ -0.78
SFXN1-211ENST00000515736 SYTL4Q96C24 671 aaPredicted RBP10.18□□□□□ -0.78
SFXN1-211ENST00000515736 SUSD3Q96L08 255 aa10.18□□□□□ -0.78
SFXN1-211ENST00000515736 UPF2Q9HAU5 1272 aaKnown RBP10.18□□□□□ -0.78
SFXN1-211ENST00000515736 ZDHHC3Q9NYG2 299 aa10.18□□□□□ -0.78
SFXN1-211ENST00000515736 ADAMTS7Q9UKP4 1686 aa10.18□□□□□ -0.78
SFXN1-211ENST00000515736 TUBGCP6Q96RT7 1819 aa10.17□□□□□ -0.78
SFXN1-211ENST00000515736 QSER1Q2KHR3 1735 aa10.17□□□□□ -0.78
SFXN1-211ENST00000515736 TIMP2P16035 220 aa10.17□□□□□ -0.78
SFXN1-211ENST00000515736 RGS3P49796 1198 aa10.17□□□□□ -0.78
SFXN1-211ENST00000515736 SLC27A3Q5K4L6 730 aa10.17□□□□□ -0.78
SFXN1-211ENST00000515736 INTS3Q68E01 1043 aaKnown RBP10.17□□□□□ -0.78
SFXN1-211ENST00000515736 PI16Q6UXB8 463 aa10.17□□□□□ -0.78
SFXN1-211ENST00000515736 USP48Q86UV5 1035 aa10.17□□□□□ -0.78
SFXN1-211ENST00000515736 KLRG1Q96E93 195 aa10.17□□□□□ -0.78
SFXN1-211ENST00000515736 OSBPL7Q9BZF2 842 aa10.17□□□□□ -0.78
SFXN1-211ENST00000515736 LNPKQ9C0E8 428 aa10.17□□□□□ -0.78
SFXN1-211ENST00000515736 SRA1Q9HD15 236 aaKnown RBP10.17□□□□□ -0.78
SFXN1-211ENST00000515736 FOXD3Q9UJU5 478 aaPredicted RBP10.17□□□□□ -0.78
SFXN1-211ENST00000515736 INPP5FQ9Y2H2 1132 aa10.17□□□□□ -0.78
SFXN1-211ENST00000515736 PCDHGB7Q9Y5F8 929 aa10.17□□□□□ -0.78
SFXN1-211ENST00000515736 GPC6Q9Y625 555 aaPredicted RBP10.17□□□□□ -0.78
SFXN1-211ENST00000515736 SIPA1L3O60292 1781 aaPredicted RBP10.16□□□□□ -0.78
SFXN1-211ENST00000515736 GNAT3A8MTJ3 354 aa10.16□□□□□ -0.78
SFXN1-211ENST00000515736 DNAJA1P31689 397 aaKnown RBP10.16□□□□□ -0.78
SFXN1-211ENST00000515736 GTF2F1P35269 517 aaKnown RBP eCLIP10.16□□□□□ -0.78
SFXN1-211ENST00000515736 IDH3AP50213 366 aa10.16□□□□□ -0.78
SFXN1-211ENST00000515736 RNF144AP50876 292 aaPredicted RBP10.16□□□□□ -0.78
SFXN1-211ENST00000515736 ZNF827Q17R98 1081 aa10.16□□□□□ -0.78
SFXN1-211ENST00000515736 GIMAP6Q6P9H5 292 aa10.16□□□□□ -0.78
SFXN1-211ENST00000515736 HS2ST1Q7LGA3 356 aa10.16□□□□□ -0.78
SFXN1-211ENST00000515736 ZNF280CQ8ND82 737 aa10.16□□□□□ -0.78
SFXN1-211ENST00000515736 SNIP1Q8TAD8 396 aaKnown RBP10.16□□□□□ -0.78
SFXN1-211ENST00000515736 EPS8L3Q8TE67 593 aaKnown RBP10.16□□□□□ -0.78
SFXN1-211ENST00000515736 PKD2L1Q9P0L9 805 aa10.16□□□□□ -0.78
SFXN1-211ENST00000515736 PDZRN3Q9UPQ7 1066 aa10.16□□□□□ -0.78
SFXN1-211ENST00000515736 HOXB7P09629 217 aa10.15□□□□□ -0.78
SFXN1-211ENST00000515736 IRS1P35568 1242 aa10.15□□□□□ -0.78
SFXN1-211ENST00000515736 MTHFSDQ2M296 383 aaKnown RBP10.15□□□□□ -0.78
SFXN1-211ENST00000515736 ZNF697Q5TEC3 545 aa10.15□□□□□ -0.78
SFXN1-211ENST00000515736 TSPYL6Q8N831 410 aa10.15□□□□□ -0.78
SFXN1-211ENST00000515736 C8orf58Q8NAV2 365 aa10.15□□□□□ -0.78
SFXN1-211ENST00000515736 SNX29Q8TEQ0 813 aa10.15□□□□□ -0.78
SFXN1-211ENST00000515736 AIDAQ96BJ3 306 aa10.15□□□□□ -0.78
SFXN1-211ENST00000515736 THUMPD2Q9BTF0 503 aaKnown RBP10.15□□□□□ -0.78
SFXN1-211ENST00000515736 LY75O60449 1722 aa10.15□□□□□ -0.78
SFXN1-211ENST00000515736 SHANK3Q9BYB0 1731 aa10.15□□□□□ -0.78
SFXN1-211ENST00000515736 CEMIPQ8WUJ3 1361 aa10.14□□□□□ -0.79
SFXN1-211ENST00000515736 POLD1P28340 1107 aa10.14□□□□□ -0.79
SFXN1-211ENST00000515736 INPP5BP32019 993 aa10.14□□□□□ -0.79
SFXN1-211ENST00000515736 ARSDP51689 593 aa10.14□□□□□ -0.79
SFXN1-211ENST00000515736 ARID5AQ03989 594 aa10.14□□□□□ -0.79
SFXN1-211ENST00000515736 FOXC1Q12948 553 aa10.14□□□□□ -0.79
SFXN1-211ENST00000515736 GPR162Q16538 588 aa10.14□□□□□ -0.79
SFXN1-211ENST00000515736 AMOTQ4VCS5 1084 aa10.14□□□□□ -0.79
SFXN1-211ENST00000515736 PDE12Q6L8Q7 609 aaKnown RBP10.14□□□□□ -0.79
SFXN1-211ENST00000515736 MEIOBQ8N635 442 aa10.14□□□□□ -0.79
SFXN1-211ENST00000515736 HSH2DQ96JZ2 352 aa10.14□□□□□ -0.79
SFXN1-211ENST00000515736 ZFYVE28Q9HCC9 887 aa10.14□□□□□ -0.79
SFXN1-211ENST00000515736 LRRC4BQ9NT99 713 aa10.14□□□□□ -0.79
SFXN1-211ENST00000515736 TNNQ9UQP3 1299 aa10.14□□□□□ -0.79
SFXN1-211ENST00000515736 FNDC3AQ9Y2H6 1198 aaKnown RBP10.14□□□□□ -0.79
SFXN1-211ENST00000515736 USP20Q9Y2K6 914 aa10.14□□□□□ -0.79
SFXN1-211ENST00000515736 SPATA31C2B4DYI2 1134 aa10.13□□□□□ -0.79
SFXN1-211ENST00000515736 TATP17735 454 aaPredicted RBP10.13□□□□□ -0.79
SFXN1-211ENST00000515736 KCNQ4P56696 695 aa10.13□□□□□ -0.79
SFXN1-211ENST00000515736 NUCB1Q02818 461 aa10.13□□□□□ -0.79
SFXN1-211ENST00000515736 TAF1CQ15572 869 aaPredicted RBP10.13□□□□□ -0.79
SFXN1-211ENST00000515736 TRIP4Q15650 581 aaPredicted RBP10.13□□□□□ -0.79
SFXN1-211ENST00000515736 MEI1Q5TIA1 1274 aa10.13□□□□□ -0.79
SFXN1-211ENST00000515736 ZNF438Q7Z4V0 828 aa10.13□□□□□ -0.79
SFXN1-211ENST00000515736 ZNF598Q86UK7 904 aaKnown RBP10.13□□□□□ -0.79
SFXN1-211ENST00000515736 RPAP2Q8IXW5 612 aaPredicted RBP10.13□□□□□ -0.79
SFXN1-211ENST00000515736 TFCP2L1Q9NZI6 479 aa10.13□□□□□ -0.79
SFXN1-211ENST00000515736 ANKIB1Q9P2G1 1089 aa10.13□□□□□ -0.79
SFXN1-211ENST00000515736 FAM8A1Q9UBU6 413 aa10.13□□□□□ -0.79
SFXN1-211ENST00000515736 TSPYL4Q9UJ04 414 aa10.13□□□□□ -0.79
SFXN1-211ENST00000515736 GGT7Q9UJ14 662 aa10.13□□□□□ -0.79
SFXN1-211ENST00000515736 SCN11AQ9UI33 1791 aa10.13□□□□□ -0.79
SFXN1-211ENST00000515736 J3QL48 77 aa10.12□□□□□ -0.79
SFXN1-211ENST00000515736 CDK11BP21127 795 aaKnown RBP10.12□□□□□ -0.79
SFXN1-211ENST00000515736 ST13P50502 369 aaKnown RBP10.12□□□□□ -0.79
SFXN1-211ENST00000515736 CCT4P50991 539 aaKnown RBP10.12□□□□□ -0.79
SFXN1-211ENST00000515736 RBL2Q08999 1139 aa10.12□□□□□ -0.79
SFXN1-211ENST00000515736 CCDC30Q5VVM6 783 aa10.12□□□□□ -0.79
SFXN1-211ENST00000515736 NBPF10Q6P3W6 841 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms