RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 TRDNQ13061 729 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 SLFNL1Q499Z3 407 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 VPS53Q5VIR6 699 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 CC2D2BQ6DHV5 1058 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 RUFY3Q7L099 469 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 RALYLQ86SE5 291 aaKnown RBP9.58□□□□□ -0.88
HTT-209ENST00000512068 SUPT20HQ8NEM7 779 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 TBC1D16Q8TBP0 767 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 TBC1D22AQ8WUA7 517 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 KCNB2Q92953 911 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 PCMTD1Q96MG8 357 aaPredicted RBP9.58□□□□□ -0.88
HTT-209ENST00000512068 NEK1Q96PY6 1258 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 NAPBQ9H115 298 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 POLR3EQ9NVU0 708 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 CHMP5Q9NZZ3 219 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 HPS5Q9UPZ3 1129 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 RPAP1Q9BWH6 1393 aaPredicted RBP9.58□□□□□ -0.88
HTT-209ENST00000512068 CHD4Q14839 1912 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 PATL2C9JE40 543 aaKnown RBP9.57□□□□□ -0.88
HTT-209ENST00000512068 SPTLC1O15269 473 aa9.57□□□□□ -0.88
HTT-209ENST00000512068 LDHCP07864 332 aa9.57□□□□□ -0.88
HTT-209ENST00000512068 TUSC1Q2TAM9 212 aa9.57□□□□□ -0.88
HTT-209ENST00000512068 TSGA10IPQ3SY00 556 aa9.57□□□□□ -0.88
HTT-209ENST00000512068 KMT5BQ4FZB7 885 aa9.57□□□□□ -0.88
HTT-209ENST00000512068 GRIPAP1Q4V328 841 aa9.57□□□□□ -0.88
HTT-209ENST00000512068 THSD4Q6ZMP0 1018 aa9.57□□□□□ -0.88
HTT-209ENST00000512068 TDRD7Q8NHU6 1098 aaKnown RBP9.57□□□□□ -0.88
HTT-209ENST00000512068 ZSCAN31Q96LW9 406 aaPredicted RBP9.57□□□□□ -0.88
HTT-209ENST00000512068 PRR14Q9BWN1 585 aa9.57□□□□□ -0.88
HTT-209ENST00000512068 COA1Q9GZY4 146 aa9.57□□□□□ -0.88
HTT-209ENST00000512068 CWC22Q9HCG8 908 aaKnown RBP9.57□□□□□ -0.88
HTT-209ENST00000512068 CD209Q9NNX6 404 aa9.57□□□□□ -0.88
HTT-209ENST00000512068 SLC4A4Q9Y6R1 1079 aa9.57□□□□□ -0.88
HTT-209ENST00000512068 SALL1Q9NSC2 1324 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 C10orf71Q711Q0 1435 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 LAMA4Q16363 1823 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 DLEC1Q9Y238 1755 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 COL1A1P02452 1464 aaPredicted RBP9.56□□□□□ -0.88
HTT-209ENST00000512068 TCRBV5S4A2TA0A5A2 114 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 HOXA2O43364 376 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 CD2BP2O95400 341 aaKnown RBP9.56□□□□□ -0.88
HTT-209ENST00000512068 BAG3O95817 575 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 CYP21A2P08686 494 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 RPS6KB1P23443 525 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 CHRNA5P30532 468 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 CLK2P49760 499 aaKnown RBP9.56□□□□□ -0.88
HTT-209ENST00000512068 AK2P54819 239 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 ADCK5Q3MIX3 580 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 RSBN1LQ6PCB5 846 aaPredicted RBP9.56□□□□□ -0.88
HTT-209ENST00000512068 TXNRD3Q86VQ6 643 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 CERS3Q8IU89 383 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 AMOTL1Q8IY63 956 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 MIGA1Q8NAN2 632 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 CHMP4CQ96CF2 233 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 TMX3Q96JJ7 454 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 GPR101Q96P66 508 aaPredicted RBP9.56□□□□□ -0.88
HTT-209ENST00000512068 CRNKL1Q9BZJ0 848 aaKnown RBP9.56□□□□□ -0.88
HTT-209ENST00000512068 MTFR1LQ9H019 292 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 ARMT1Q9H993 441 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 SH2B1Q9NRF2 756 aaPredicted RBP9.56□□□□□ -0.88
HTT-209ENST00000512068 POLLQ9UGP5 575 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 LIMCH1Q9UPQ0 1083 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 JAG2Q9Y219 1238 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.56□□□□□ -0.88
HTT-209ENST00000512068 KIAA1551Q9HCM1 1747 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 ZMYM6O95789 1325 aa9.56□□□□□ -0.88
HTT-209ENST00000512068 MYH2Q9UKX2 1941 aa9.55□□□□□ -0.88
HTT-209ENST00000512068 SLX4Q8IY92 1834 aa9.55□□□□□ -0.88
HTT-209ENST00000512068 MOXD2PA6NHM9 499 aa9.55□□□□□ -0.88
HTT-209ENST00000512068 WTIPA6NIX2 430 aaPredicted RBP9.55□□□□□ -0.88
HTT-209ENST00000512068 ACTN4O43707 911 aaKnown RBP9.55□□□□□ -0.88
HTT-209ENST00000512068 ZBTB7AO95365 584 aa9.55□□□□□ -0.88
HTT-209ENST00000512068 FGAP02671 866 aa9.55□□□□□ -0.88
HTT-209ENST00000512068 IL1R1P14778 569 aa9.55□□□□□ -0.88
HTT-209ENST00000512068 HAND2P61296 217 aa9.55□□□□□ -0.88
HTT-209ENST00000512068 MECOMQ03112 1051 aa9.55□□□□□ -0.88
HTT-209ENST00000512068 FUT2Q10981 343 aa9.55□□□□□ -0.88
HTT-209ENST00000512068 SOGA3Q5TF21 947 aa9.55□□□□□ -0.88
HTT-209ENST00000512068 TTLL6Q8N841 843 aa9.55□□□□□ -0.88
HTT-209ENST00000512068 NCOA7Q8NI08 942 aa9.55□□□□□ -0.88
HTT-209ENST00000512068 KCTD12Q96CX2 325 aaKnown RBP9.55□□□□□ -0.88
HTT-209ENST00000512068 STRBPQ96SI9 672 aaKnown RBP9.55□□□□□ -0.88
HTT-209ENST00000512068 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.55□□□□□ -0.88
HTT-209ENST00000512068 LTBP1Q14766 1721 aa9.55□□□□□ -0.88
HTT-209ENST00000512068 IRS2Q9Y4H2 1338 aa9.55□□□□□ -0.88
HTT-209ENST00000512068 E7EWF7 191 aa9.54□□□□□ -0.88
HTT-209ENST00000512068 SLC3A2P08195 630 aaKnown RBP9.54□□□□□ -0.88
HTT-209ENST00000512068 PRDX5P30044 214 aa9.54□□□□□ -0.88
HTT-209ENST00000512068 ALX1Q15699 326 aa9.54□□□□□ -0.88
HTT-209ENST00000512068 CCDC93Q567U6 631 aa9.54□□□□□ -0.88
HTT-209ENST00000512068 MFSD14BQ5SR56 506 aa9.54□□□□□ -0.88
HTT-209ENST00000512068 DHX32Q7L7V1 743 aaKnown RBP9.54□□□□□ -0.88
HTT-209ENST00000512068 IFNL3Q8IZI9 196 aa9.54□□□□□ -0.88
HTT-209ENST00000512068 LCORLQ8N3X6 602 aa9.54□□□□□ -0.88
HTT-209ENST00000512068 PROCA1Q8NCQ7 364 aaPredicted RBP9.54□□□□□ -0.88
HTT-209ENST00000512068 NSUN4Q96CB9 384 aaKnown RBP9.54□□□□□ -0.88
HTT-209ENST00000512068 INTS4Q96HW7 963 aaKnown RBP9.54□□□□□ -0.88
HTT-209ENST00000512068 TTC14Q96N46 770 aa9.54□□□□□ -0.88
HTT-209ENST00000512068 RNF41Q9H4P4 317 aaPredicted RBP9.54□□□□□ -0.88
HTT-209ENST00000512068 CNNM2Q9H8M5 875 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms