RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 KNTC1P50748 2209 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 MAP1AP78559 2803 aaPredicted RBP2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 H3BQF6 201 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 LINC00271P0C7V0 271 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 HOXD13P35453 343 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 USP5P45974 858 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 EXOSC9Q06265 439 aaKnown RBP2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 MTHFSDQ2M296 383 aaKnown RBP2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 SH2D5Q6ZV89 423 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 NME9Q86XW9 330 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 ZNF341Q9BYN7 854 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 PNNQ9H307 717 aaKnown RBP2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 ZNF408Q9H9D4 720 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 MAST4O15021 2626 aa2.05□□□□□ -2.08
TRAPPC13-211ENST00000512009 FAM221BA6H8Z2 402 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 TRIM64A6NGJ6 449 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 NPHP1O15259 732 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 MAPK8IP2Q13387 824 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 CNGB1Q14028 1251 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 SETDB2Q96T68 719 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 TMX4Q9H1E5 349 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 TLL2Q9Y6L7 1015 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 DNAH9Q9NYC9 4486 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 CACNA1HO95180 2353 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 ANP32CO43423 234 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 EIF4A1P60842 406 aaKnown RBP2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 PTPN12Q05209 780 aaKnown RBP2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 GRIN1Q05586 938 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 MAMSTRQ6ZN01 415 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 C17orf53Q8N3J3 647 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 RUNDC1Q96C34 613 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 GDF15Q99988 308 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 WDR83Q9BRX9 315 aaKnown RBP2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 MCMBPQ9BTE3 642 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 ANKZF1Q9H8Y5 726 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 SYNPO2Q9UMS6 1093 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 PLIN4Q96Q06 1357 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 UBN2Q6ZU65 1347 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 KAT6AQ92794 2004 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 MDC1Q14676 2089 aaKnown RBP2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 MEFVO15553 781 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 HOXC6P09630 235 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 MYBL2P10244 700 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 ATF7P17544 494 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 CUL4BQ13620 913 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 KRTAP21-3Q3LHN1 58 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 TNNI3KQ59H18 835 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 PHC3Q8NDX5 983 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 CHMP4BQ9H444 224 aaKnown RBP2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 COG6Q9Y2V7 657 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 FPGT-TNNI3KV9GXZ4 949 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 VWFP04275 2813 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 POTEFA5A3E0 1075 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 RCCD1A6NED2 376 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 HMGB1P1B2RPK0 211 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 FCHSD2O94868 740 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 MAP4K4O95819 1239 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 ACAP2Q15057 778 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 ZSCAN23Q3MJ62 389 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 CDAN1Q8IWY9 1227 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 FMR1NBQ8N0W7 255 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 SLC43A3Q8NBI5 491 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 INTS4Q96HW7 963 aaKnown RBP2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 FAXDC2Q96IV6 333 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 CLIC6Q96NY7 704 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 SH3GL2Q99962 352 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 TPCN1Q9ULQ1 816 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 WASF3Q9UPY6 502 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 NEUROG3Q9Y4Z2 214 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 PCDHA2Q9Y5H9 948 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 SLC10A3P09131 477 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 IL2RBP14784 551 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 PDE1AP54750 535 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 PDE4BQ07343 736 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 FOXR1Q6PIV2 292 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 TEPSINQ96N21 525 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 CEP89Q96ST8 783 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 ISCA1Q9BUE6 129 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 FHDC1Q9C0D6 1143 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 IFT57Q9NWB7 429 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 NRBP1Q9UHY1 535 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 ADAMTS5Q9UNA0 930 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 KCNH4Q9UQ05 1017 aa2.04□□□□□ -2.08
TRAPPC13-211ENST00000512009 OAS1P00973 400 aaKnown RBP2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 ACVR2AP27037 513 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 CALRP27797 417 aaKnown RBP2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 SCARF1Q14162 830 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 CDKAL1Q5VV42 579 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 ATL2Q8NHH9 583 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 CACTINQ8WUQ7 758 aaKnown RBP2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 PIBF1Q8WXW3 757 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 FUT8Q9BYC5 575 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 OSBPL5Q9H0X9 879 aaPredicted RBP2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 CRISPLD1Q9H336 500 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 ZKSCAN5Q9Y2L8 839 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 CACNA1GO43497 2377 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 FLNCQ14315 2725 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 KIF28PB7ZC32 967 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 CAP1Q01518 475 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms