RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 NFKBIBQ15653 356 aa11.21□□□□□ -0.61
TRAPPC11-206ENST00000509857 USP48Q86UV5 1035 aa11.21□□□□□ -0.61
TRAPPC11-206ENST00000509857 DBNDD2Q9BQY9 259 aa11.21□□□□□ -0.61
TRAPPC11-206ENST00000509857 LRRC3Q9BY71 257 aa11.21□□□□□ -0.61
TRAPPC11-206ENST00000509857 WNT10AQ9GZT5 417 aa11.21□□□□□ -0.61
TRAPPC11-206ENST00000509857 PRKAG2Q9UGJ0 569 aa11.21□□□□□ -0.61
TRAPPC11-206ENST00000509857 DDX41Q9UJV9 622 aaKnown RBP11.21□□□□□ -0.61
TRAPPC11-206ENST00000509857 PCOLCE2Q9UKZ9 415 aa11.21□□□□□ -0.61
TRAPPC11-206ENST00000509857 SUPT16HQ9Y5B9 1047 aaKnown RBP11.21□□□□□ -0.61
TRAPPC11-206ENST00000509857 ZNF296Q8WUU4 475 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC11-206ENST00000509857 GATA6Q92908 595 aa11.2□□□□□ -0.62
TRAPPC11-206ENST00000509857 C1GALT1Q9NS00 363 aa11.2□□□□□ -0.62
TRAPPC11-206ENST00000509857 ROBO2Q9HCK4 1378 aa11.19□□□□□ -0.62
TRAPPC11-206ENST00000509857 PRAMEF27A3QJZ7 478 aa11.19□□□□□ -0.62
TRAPPC11-206ENST00000509857 DYNC1LI2O43237 492 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC11-206ENST00000509857 RNGTTO60942 597 aaKnown RBP11.19□□□□□ -0.62
TRAPPC11-206ENST00000509857 MPP2Q14168 576 aa11.19□□□□□ -0.62
TRAPPC11-206ENST00000509857 ZNF394Q53GI3 561 aa11.19□□□□□ -0.62
TRAPPC11-206ENST00000509857 PICK1Q9NRD5 415 aa11.19□□□□□ -0.62
TRAPPC11-206ENST00000509857 BPNT1O95861 308 aa11.18□□□□□ -0.62
TRAPPC11-206ENST00000509857 KCT2Q8NC54 265 aa11.18□□□□□ -0.62
TRAPPC11-206ENST00000509857 ZNF507Q8TCN5 953 aa11.18□□□□□ -0.62
TRAPPC11-206ENST00000509857 PCDHGB7Q9Y5F8 929 aa11.18□□□□□ -0.62
TRAPPC11-206ENST00000509857 RACK1P63244 317 aaKnown RBP11.17□□□□□ -0.62
TRAPPC11-206ENST00000509857 UBE3DQ7Z6J8 389 aa11.17□□□□□ -0.62
TRAPPC11-206ENST00000509857 ZAR1Q86SH2 424 aa11.17□□□□□ -0.62
TRAPPC11-206ENST00000509857 NT5DC4Q86YG4 428 aa11.17□□□□□ -0.62
TRAPPC11-206ENST00000509857 PSMG3-AS1Q96PY0 264 aa11.17□□□□□ -0.62
TRAPPC11-206ENST00000509857 CAP2P40123 477 aa11.16□□□□□ -0.62
TRAPPC11-206ENST00000509857 REC114Q7Z4M0 266 aa11.16□□□□□ -0.62
TRAPPC11-206ENST00000509857 ZDHHC13Q8IUH4 622 aa11.16□□□□□ -0.62
TRAPPC11-206ENST00000509857 KIAA0825Q8IV33 1275 aa11.16□□□□□ -0.62
TRAPPC11-206ENST00000509857 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRAPPC11-206ENST00000509857 FBXO27Q8NI29 283 aa11.16□□□□□ -0.62
TRAPPC11-206ENST00000509857 NT5C1AQ9BXI3 368 aa11.16□□□□□ -0.62
TRAPPC11-206ENST00000509857 PRR36Q9H6K5 1346 aa11.15□□□□□ -0.62
TRAPPC11-206ENST00000509857 TCF3P15923 654 aa11.15□□□□□ -0.62
TRAPPC11-206ENST00000509857 GRK4P32298 578 aa11.15□□□□□ -0.62
TRAPPC11-206ENST00000509857 ADMP35318 185 aa11.15□□□□□ -0.62
TRAPPC11-206ENST00000509857 ZNF654Q8IZM8 581 aa11.15□□□□□ -0.62
TRAPPC11-206ENST00000509857 MFSD14AQ96MC6 490 aa11.15□□□□□ -0.62
TRAPPC11-206ENST00000509857 SPON2Q9BUD6 331 aa11.15□□□□□ -0.62
TRAPPC11-206ENST00000509857 SSU72Q9NP77 194 aaKnown RBP11.15□□□□□ -0.62
TRAPPC11-206ENST00000509857 IGSF5Q9NSI5 407 aa11.15□□□□□ -0.62
TRAPPC11-206ENST00000509857 E9PSI1 815 aa11.14□□□□□ -0.63
TRAPPC11-206ENST00000509857 ETF1P62495 437 aaKnown RBP11.14□□□□□ -0.63
TRAPPC11-206ENST00000509857 CPSF6Q16630 551 aaKnown RBP eCLIP11.14□□□□□ -0.63
TRAPPC11-206ENST00000509857 SHKBP1Q8TBC3 707 aa11.14□□□□□ -0.63
TRAPPC11-206ENST00000509857 TBC1D32Q96NH3 1257 aa11.14□□□□□ -0.63
TRAPPC11-206ENST00000509857 FBRSQ9HAH7 460 aa11.14□□□□□ -0.63
TRAPPC11-206ENST00000509857 ADAM30Q9UKF2 790 aa11.14□□□□□ -0.63
TRAPPC11-206ENST00000509857 F13BP05160 661 aa11.13□□□□□ -0.63
TRAPPC11-206ENST00000509857 CRKP46108 304 aa11.13□□□□□ -0.63
TRAPPC11-206ENST00000509857 PDE4BQ07343 736 aa11.13□□□□□ -0.63
TRAPPC11-206ENST00000509857 RAD51AP2Q09MP3 1159 aa11.13□□□□□ -0.63
TRAPPC11-206ENST00000509857 CWF19L2Q2TBE0 894 aaKnown RBP11.13□□□□□ -0.63
TRAPPC11-206ENST00000509857 CDC37L1Q7L3B6 337 aa11.13□□□□□ -0.63
TRAPPC11-206ENST00000509857 HID1Q8IV36 788 aa11.13□□□□□ -0.63
TRAPPC11-206ENST00000509857 LGR6Q9HBX8 967 aa11.13□□□□□ -0.63
TRAPPC11-206ENST00000509857 POLR3KQ9Y2Y1 108 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC11-206ENST00000509857 CDK5R2Q13319 367 aa11.12□□□□□ -0.63
TRAPPC11-206ENST00000509857 SLBPQ14493 270 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRAPPC11-206ENST00000509857 C9orf131Q5VYM1 1079 aa11.12□□□□□ -0.63
TRAPPC11-206ENST00000509857 SHISA5Q8N114 240 aa11.12□□□□□ -0.63
TRAPPC11-206ENST00000509857 GIMAP7Q8NHV1 300 aa11.12□□□□□ -0.63
TRAPPC11-206ENST00000509857 EAF1Q96JC9 268 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC11-206ENST00000509857 UBP1Q9NZI7 540 aa11.12□□□□□ -0.63
TRAPPC11-206ENST00000509857 RB1CC1Q8TDY2 1594 aa11.11□□□□□ -0.63
TRAPPC11-206ENST00000509857 ABCC9O60706 1549 aa11.11□□□□□ -0.63
TRAPPC11-206ENST00000509857 TLR3O15455 904 aaKnown RBP11.11□□□□□ -0.63
TRAPPC11-206ENST00000509857 LRIG2O94898 1065 aa11.11□□□□□ -0.63
TRAPPC11-206ENST00000509857 TMEM201Q5SNT2 666 aa11.11□□□□□ -0.63
TRAPPC11-206ENST00000509857 OGFOD3Q6PK18 319 aa11.11□□□□□ -0.63
TRAPPC11-206ENST00000509857 ARMCX6Q7L4S7 300 aa11.11□□□□□ -0.63
TRAPPC11-206ENST00000509857 MRPL41Q8IXM3 137 aaKnown RBP11.11□□□□□ -0.63
TRAPPC11-206ENST00000509857 FBXL6Q8N531 539 aa11.11□□□□□ -0.63
TRAPPC11-206ENST00000509857 METTL22Q9BUU2 404 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC11-206ENST00000509857 TGIF2Q9GZN2 237 aa11.11□□□□□ -0.63
TRAPPC11-206ENST00000509857 PRR19A6NJB7 356 aa11.1□□□□□ -0.63
TRAPPC11-206ENST00000509857 PGRP06401 933 aa11.1□□□□□ -0.63
TRAPPC11-206ENST00000509857 CYP27A1Q02318 531 aa11.1□□□□□ -0.63
TRAPPC11-206ENST00000509857 APOBRQ0VD83 1088 aa11.1□□□□□ -0.63
TRAPPC11-206ENST00000509857 NKG7Q16617 165 aa11.1□□□□□ -0.63
TRAPPC11-206ENST00000509857 SLITRK4Q8IW52 837 aa11.1□□□□□ -0.63
TRAPPC11-206ENST00000509857 RNF112Q9ULX5 631 aa11.1□□□□□ -0.63
TRAPPC11-206ENST00000509857 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC11-206ENST00000509857 CORINQ9Y5Q5 1042 aa11.1□□□□□ -0.63
TRAPPC11-206ENST00000509857 FAM170BA6NMN3 283 aa11.09□□□□□ -0.63
TRAPPC11-206ENST00000509857 WDR64B1ANS9 1081 aa11.09□□□□□ -0.63
TRAPPC11-206ENST00000509857 TJP2Q9UDY2 1190 aa11.09□□□□□ -0.63
TRAPPC11-206ENST00000509857 ATE1O95260 518 aa11.08□□□□□ -0.64
TRAPPC11-206ENST00000509857 CST3P01034 146 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC11-206ENST00000509857 ACSF2Q96CM8 615 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC11-206ENST00000509857 DUSP23Q9BVJ7 150 aa11.08□□□□□ -0.64
TRAPPC11-206ENST00000509857 FOXQ1Q9C009 403 aa11.08□□□□□ -0.64
TRAPPC11-206ENST00000509857 BRMS1Q9HCU9 246 aa11.08□□□□□ -0.64
TRAPPC11-206ENST00000509857 ATG3Q9NT62 314 aa11.08□□□□□ -0.64
TRAPPC11-206ENST00000509857 HTR3BO95264 441 aa11.07□□□□□ -0.64
TRAPPC11-206ENST00000509857 FAM87AP0C7U9 286 aa11.07□□□□□ -0.64
TRAPPC11-206ENST00000509857 PLCG1P19174 1290 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms