RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 U2AF2P26368 475 aaKnown RBP eCLIP17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 SBK1Q52WX2 424 aa17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 ZNF804AQ7Z570 1209 aa17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 DZIP1Q86YF9 867 aaKnown RBP17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 CRACR2BQ8N4Y2 399 aaPredicted RBP17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 DCP1AQ9NPI6 582 aaPredicted RBP17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 MYH13Q9UKX3 1938 aa17.89■□□□□ 0.46
SNCAIP-207ENST00000504884 BBOX1O75936 387 aa17.89■□□□□ 0.45
SNCAIP-207ENST00000504884 ORC4O43929 436 aa17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 TRIM37O94972 964 aa17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 DEXIO95424 95 aa17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 PTMAP06454 111 aaKnown RBP17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 LDHBP07195 334 aaKnown RBP17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 ATP2B4P23634 1241 aa17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 SLC39A14Q15043 492 aa17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 ANO6Q4KMQ2 910 aa17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 NBPF11Q86T75 865 aa17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 NUP133Q8WUM0 1156 aa17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 ARPP21Q9UBL0 812 aaPredicted RBP17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 UBR3Q6ZT12 1888 aa17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 CYP2D7A0A087X1C5 515 aa17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 GSTO1P78417 241 aa17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 SAFBQ15424 915 aaKnown RBP eCLIP17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 CATIPQ7Z7H3 387 aa17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 FMR1NBQ8N0W7 255 aaPredicted RBP17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 ENAHQ8N8S7 591 aaPredicted RBP17.88■□□□□ 0.45
SNCAIP-207ENST00000504884 SMIM22K7EJ46 135 aa17.87■□□□□ 0.45
SNCAIP-207ENST00000504884 CALM1P0DP23 149 aa17.87■□□□□ 0.45
SNCAIP-207ENST00000504884 CALM2P0DP24 149 aa17.87■□□□□ 0.45
SNCAIP-207ENST00000504884 CALM3P0DP25 149 aa17.87■□□□□ 0.45
SNCAIP-207ENST00000504884 NT5C2P49902 561 aa17.87■□□□□ 0.45
SNCAIP-207ENST00000504884 IFIT1BQ5T764 474 aaKnown RBP17.87■□□□□ 0.45
SNCAIP-207ENST00000504884 ZKSCAN5Q9Y2L8 839 aa17.87■□□□□ 0.45
SNCAIP-207ENST00000504884 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.87■□□□□ 0.45
SNCAIP-207ENST00000504884 LDHCP07864 332 aa17.86■□□□□ 0.45
SNCAIP-207ENST00000504884 HOXA10P31260 410 aaPredicted RBP17.86■□□□□ 0.45
SNCAIP-207ENST00000504884 GPSM2P81274 684 aa17.86■□□□□ 0.45
SNCAIP-207ENST00000504884 JMYQ8N9B5 988 aa17.86■□□□□ 0.45
SNCAIP-207ENST00000504884 JAG2Q9Y219 1238 aa17.86■□□□□ 0.45
SNCAIP-207ENST00000504884 CCDC88AQ3V6T2 1871 aa17.86■□□□□ 0.45
SNCAIP-207ENST00000504884 PPP6R2O75170 966 aa17.86■□□□□ 0.45
SNCAIP-207ENST00000504884 BAG3O95817 575 aa17.86■□□□□ 0.45
SNCAIP-207ENST00000504884 MMP1P03956 469 aa17.86■□□□□ 0.45
SNCAIP-207ENST00000504884 CMA1P23946 247 aa17.86■□□□□ 0.45
SNCAIP-207ENST00000504884 PDE4BQ07343 736 aa17.86■□□□□ 0.45
SNCAIP-207ENST00000504884 RNF26Q9BY78 433 aaPredicted RBP17.86■□□□□ 0.45
SNCAIP-207ENST00000504884 CBX8Q9HC52 389 aa17.86■□□□□ 0.45
SNCAIP-207ENST00000504884 RBM28Q9NW13 759 aaKnown RBP17.86■□□□□ 0.45
SNCAIP-207ENST00000504884 BAZ2AQ9UIF9 1905 aaKnown RBP17.85■□□□□ 0.45
SNCAIP-207ENST00000504884 DUOX1Q9NRD9 1551 aa17.85■□□□□ 0.45
SNCAIP-207ENST00000504884 A0A1B0GVL5 298 aa17.85■□□□□ 0.45
SNCAIP-207ENST00000504884 PRDM1O75626 825 aa17.85■□□□□ 0.45
SNCAIP-207ENST00000504884 GUCY1A2P33402 732 aa17.85■□□□□ 0.45
SNCAIP-207ENST00000504884 ZNF165P49910 485 aa17.85■□□□□ 0.45
SNCAIP-207ENST00000504884 PLCB2Q00722 1185 aa17.85■□□□□ 0.45
SNCAIP-207ENST00000504884 AKAP17AQ02040 695 aaKnown RBP17.85■□□□□ 0.45
SNCAIP-207ENST00000504884 CRAMP1Q96RY5 1269 aa17.85■□□□□ 0.45
SNCAIP-207ENST00000504884 SDF4Q9BRK5 362 aa17.85■□□□□ 0.45
SNCAIP-207ENST00000504884 GGA1Q9UJY5 639 aa17.85■□□□□ 0.45
SNCAIP-207ENST00000504884 NDUFA8P51970 172 aa17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 PPP4CP60510 307 aa17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 TXNRD1Q16881 649 aa17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 AXDND1Q5T1B0 1012 aaPredicted RBP17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 NOSTRINQ8IVI9 506 aa17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 CCDC82Q8N4S0 544 aa17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 FOXP1Q9H334 677 aaPredicted RBP17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 MAST2Q6P0Q8 1798 aa17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 KLRG2A4D1S0 409 aaPredicted RBP17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 UBE2Q2LH0YL09 131 aa17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 POLRMTO00411 1230 aaKnown RBP17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 UFL1O94874 794 aa17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 STX1AQ16623 288 aa17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 LUZP1Q86V48 1076 aa17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 CERS3Q8IU89 383 aa17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 MAP3K14Q99558 947 aa17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 NOL10Q9BSC4 688 aaKnown RBP17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 CD209Q9NNX6 404 aa17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 MCM9Q9NXL9 1143 aa17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 PODXL2Q9NZ53 605 aa17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 TAOK2Q9UL54 1235 aa17.84■□□□□ 0.45
SNCAIP-207ENST00000504884 MYH2Q9UKX2 1941 aa17.83■□□□□ 0.44
SNCAIP-207ENST00000504884 ZNF500O60304 480 aaPredicted RBP17.83■□□□□ 0.44
SNCAIP-207ENST00000504884 DDAH1O94760 285 aa17.83■□□□□ 0.44
SNCAIP-207ENST00000504884 IL1R1P14778 569 aa17.83■□□□□ 0.44
SNCAIP-207ENST00000504884 XBP1P17861 261 aa17.83■□□□□ 0.44
SNCAIP-207ENST00000504884 USP5P45974 858 aa17.83■□□□□ 0.44
SNCAIP-207ENST00000504884 TROAPQ12815 778 aa17.83■□□□□ 0.44
SNCAIP-207ENST00000504884 PTPAQ15257 358 aa17.83■□□□□ 0.44
SNCAIP-207ENST00000504884 TMC4Q7Z404 712 aa17.83■□□□□ 0.44
SNCAIP-207ENST00000504884 PROM2Q8N271 834 aa17.83■□□□□ 0.44
SNCAIP-207ENST00000504884 DNAJC25Q9H1X3 360 aa17.83■□□□□ 0.44
SNCAIP-207ENST00000504884 MKRN1Q9UHC7 482 aaKnown RBP17.83■□□□□ 0.44
SNCAIP-207ENST00000504884 BTBD18B2RXH4 712 aa17.82■□□□□ 0.44
SNCAIP-207ENST00000504884 AP5Z1O43299 807 aa17.82■□□□□ 0.44
SNCAIP-207ENST00000504884 PRPF3O43395 683 aaKnown RBP17.82■□□□□ 0.44
SNCAIP-207ENST00000504884 DDR1Q08345 913 aa17.82■□□□□ 0.44
SNCAIP-207ENST00000504884 DIS3L2Q8IYB7 885 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms