RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 PDPK1O15530 556 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 KCNQ2O43526 872 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 TRPA1O75762 1119 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 ASMTLO95671 621 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 CELA3AP09093 270 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 MX2P20592 715 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 ITPKAP23677 461 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 ADH6P28332 368 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 GRIA4P48058 902 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 FAM160A1Q05DH4 1040 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 APOBRQ0VD83 1088 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 SPRED3Q2MJR0 410 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 ZNF296Q8WUU4 475 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 BSNDQ8WZ55 320 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 ZNF512BQ96KM6 892 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 CNTNAP3BQ96NU0 1288 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 TRIM56Q9BRZ2 755 aaKnown RBP5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 CNTNAP3Q9BZ76 1288 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 MIR1-1HGQ9H1L0 117 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 CLEC4MQ9H2X3 399 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 CBX8Q9HC52 389 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 CD2APQ9Y5K6 639 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 GLI2P10070 1586 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 DIP2BQ9P265 1576 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 KIF13AQ9H1H9 1805 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 CTTNBP2Q8WZ74 1663 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 SHTN1A0MZ66 631 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 IFRD1O00458 451 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 SIN3BO75182 1162 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 THBS1P07996 1170 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 ATF3P18847 181 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 PCBP4P57723 403 aaKnown RBP5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 ATP11AP98196 1134 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 COL9A2Q14055 689 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 SEPT6Q14141 434 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 UBAP2LQ14157 1087 aaKnown RBP5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 LRRC14Q15048 493 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 BRD3Q15059 726 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 ZRSR2Q15696 482 aaKnown RBP5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 C10orf62Q5T681 223 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 PCNX4Q63HM2 1172 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 CCDC81Q6ZN84 652 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 VWA5B2Q8N398 1253 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 SAMD3Q8N6K7 520 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 UBR7Q8N806 425 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 FAM169BQ8N8A8 192 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 GOLM1Q8NBJ4 401 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 NXPE3Q969Y0 559 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 PLD4Q96BZ4 506 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 ZNF576Q9H609 170 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 AVENQ9NQS1 362 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 PLB1Q6P1J6 1458 aa5.51□□□□□ -1.53
HMGB1P21-201ENST00000502313 EIF4EBP3O60516 100 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 TRIM37O94972 964 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 SCGB1D2O95969 90 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 FGAP02671 866 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 MYL1P05976 194 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 ALAS2P22557 587 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 ADH7P40394 386 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 EPHB1P54762 984 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 RPS26P62854 115 aaKnown RBP5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 CTBSQ01459 385 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 LMNB2Q03252 620 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 PCDH1Q08174 1060 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 RASGRF1Q13972 1273 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 CWF19L2Q2TBE0 894 aaKnown RBP5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 C2orf27AQ580R0 203 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 FBXW10Q5XX13 1052 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 FAM117BQ6P1L5 589 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 KSR2Q6VAB6 950 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 PHC3Q8NDX5 983 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 NKD1Q969G9 470 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 SHDQ96IW2 340 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 NECAB3Q96P71 396 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 CRBNQ96SW2 442 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 SENP7Q9BQF6 1050 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 SRRTQ9BXP5 876 aaKnown RBP5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 EMILIN2Q9BXX0 1053 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 LACRTQ9GZZ8 138 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 SMG9Q9H0W8 520 aaKnown RBP5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 SEC31BQ9NQW1 1179 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 MAP3K20Q9NYL2 800 aaKnown RBP5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 GMPR2Q9P2T1 348 aaKnown RBP5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 DACH1Q9UI36 760 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 SLC6A14Q9UN76 642 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 GOLGA3Q08378 1498 aa5.5□□□□□ -1.53
HMGB1P21-201ENST00000502313 DIAPH1O60610 1272 aaKnown RBP5.49□□□□□ -1.53
HMGB1P21-201ENST00000502313 PPFIA3O75145 1194 aa5.49□□□□□ -1.53
HMGB1P21-201ENST00000502313 FOSP01100 380 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P21-201ENST00000502313 PF4P02776 101 aa5.49□□□□□ -1.53
HMGB1P21-201ENST00000502313 MYCLP1P12525 358 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P21-201ENST00000502313 MCM4P33991 863 aa5.49□□□□□ -1.53
HMGB1P21-201ENST00000502313 MAP2K3P46734 347 aa5.49□□□□□ -1.53
HMGB1P21-201ENST00000502313 ARL4DP49703 201 aa5.49□□□□□ -1.53
HMGB1P21-201ENST00000502313 ZNF157P51786 506 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P21-201ENST00000502313 NFKB2Q00653 900 aa5.49□□□□□ -1.53
HMGB1P21-201ENST00000502313 CAMK2GQ13555 558 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P21-201ENST00000502313 TCEA2Q15560 299 aa5.49□□□□□ -1.53
HMGB1P21-201ENST00000502313 VPS72Q15906 364 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms